FC920505

Overview
NameFC920505
Unique NameFC920505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5884 contig Ccv1_Contig5884:1..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24
Identity = 50/143 (34.97%), Postives = 86/143 (60.14%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFESRNS-KKDPVVIWLTGGPGCSSELAVFYENGPFSIADN------MSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +      ++FY+F +S N+ ++DP++IWLTGGP C++  A+ +E GP +           SLV   + W K ++++++DQP GTG+SY++     + ++ G +   Y+FLQ +  E+P+   N  Y+ G+SYAG  +PA
Sbjct:   46 GYIGVGEGEKVQLFYYFIKSENNPEEDPLIIWLTGGPACTALSALAFEIGPLTFKTEGYNGGLPSLVSTSYSWTKVASIIFLDQPVGTGYSYSTTPLSYKPSDTGEAKQTYEFLQKWLVENPQFVSNPIYVGGDSYAGIVVPA 188          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24
Identity = 59/142 (41.55%), Postives = 88/142 (61.97%), Query Frame = 1
Query:  292 HAGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            ++GY K   S   ++ Y+F ES ++ K  PVV+WL GGPGCSS   +  E+GPF I  D ++L +N + W+  +N+LY++ P G GFSY+ DK     N+  V+   ++ L+ FF   P+   N+ ++TGESYAG YIP  A
Sbjct:   49 YSGYLK--GSGSKRLHYWFVESQKDPKSSPVVLWLNGGPGCSSLDGLLTEHGPFLIQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDK-SYATNDTEVAQSNFEALKDFFCLFPEYKGNELFLTGESYAGIYIPTLA 187          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP50_ARATH (Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24
Identity = 57/148 (38.51%), Postives = 82/148 (55.41%), Query Frame = 1
Query:  277 EDLGHHAGYYKLPHSHDAKMFYFFFESRNSKKD----PVVIWLTGGPGCSSELAVFYENGPFSIADNMS-LVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            E L   +GY  +  +  + MFY F+E++         P+++WL GGPGCSS +  FYE GP+ +    + L  N   W++   LL+VD P G GFS  + ++DI  N+  V+  LY  L  F E++P       Y TGESYAG Y+PA
Sbjct:   31 EALPTKSGYLPVKPAPGSSMFYAFYEAQEPTTPLPDTPLLVWLQGGPGCSSMIGNFYELGPWRVVSRATDLERNPGAWNRLFGLLFVDNPIGVGFSIAASQQDIPTNQRQVAEHLYAALVEFLEQNPSFENRPVYFTGESYAGKYVPA 178          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP16_ARATH (Serine carboxypeptidase-like 16 OS=Arabidopsis thaliana GN=SCPL16 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24
Identity = 56/142 (39.44%), Postives = 84/142 (59.15%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFESR-NSKKDPVVIWLTGGPGCSSELAVFYENGPFSI---ADNMS---LVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIP 702
            GY  +    + +MFY+F +S  N K DP+++WL+GGPGCSS   + YENGP      A N S   LV   + W K +N++Y+DQP GTGFSY+ +      ++ G +  + +FL+ +  +HP+   N FY  G SY+G  +P
Sbjct:   44 GYIGVGEEDEDQMFYYFIKSESNPKTDPLLLWLSGGPGCSSFTGLIYENGPLGFKVEAYNGSIPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPLADIPSDTGSAKRVDEFLRKWLTKHPEYFSNPFYAGGNSYSGKMVP 185          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.799e-24
Identity = 57/143 (39.86%), Postives = 82/143 (57.34%), Query Frame = 1
Query:  292 HAGYYKLPHSHDAKMFYFFFESR-NSKKDPVVIWLTGGPGCSS-ELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRH-NEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            ++GY  +       +FY+F E+  N    P+V+WL GGPGCSS  +  F ENGPF     + LV N+H W++ +N+LY++ P G GFSY++        N+   + D   FLQ +F + P       +ITGESYAGHY+P  A
Sbjct:   46 YSGYVTVDDKKQRALFYYFAEAETNPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGPI-LVKNQHSWNQEANMLYLETPVGVGFSYSTQSSHYEGVNDKITARDNLVFLQRWFLKFPHYLNRSLFITGESYAGHYVPQLA 187          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 6.799e-24
Identity = 59/150 (39.33%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  265 GVSVEDLGHHAGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSS-ELAVFYENGPFSIADN-MSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDI-RHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIP 702
            G    D   ++GY  +       +FY   E+  +++  P+V+WL GGPGCSS       E G F +      LV NE+ W+K +N+L++D P G GFSYT+   DI    +   ++D Y FL  +FE  P     DFYI GESYAGHY+P
Sbjct:   16 GQPAVDFDMYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVP 165          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24
Identity = 57/145 (39.31%), Postives = 82/145 (56.55%), Query Frame = 1
Query:  280 DLGHHAGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSS-ELAVFYENGPFSIADN-MSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDI-RHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIP 702
            D   ++GY  +  +    +FY   E+   ++  P+V+WL GGPGCSS       E G F +      LV NE+ W+K +N+L++D P G GFSYT+   DI    +   ++D Y FL A+FE  P     +FY+ GESYAGHY+P
Sbjct:   53 DFDMYSGYITVDEAAGRSLFYLLQEAPEEAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVMPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAAWFERFPHYKYREFYVAGESYAGHYVP 197          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.160e-23
Identity = 55/159 (34.59%), Postives = 87/159 (54.72%), Query Frame = 1
Query:  241 NLLRESGGGVSVEDLGHHAGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            +L+++  G  S      + GY  +       ++Y+F E+ +     P+VIW  GGPGCSS    F E GPF + +D  +L  N + W+  +N+L+++ P GTGFSY++   + +  +   + D Y FL  + E  P+    D YI G+SYAGHY+P  A
Sbjct:   62 DLIQQLPGQPSDVTFKQYGGYVAVNKPAGRFLYYYFVETIKPGNTTPLVIWFNGGPGCSSLGGAFKELGPFRVHSDGKTLFRNPYSWNNEANVLFLETPVGTGFSYSNSPINGKQGDKATAEDNYMFLVNWLERFPEYKGRDIYIAGQSYAGHYVPQLA 220          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.160e-23
Identity = 58/142 (40.85%), Postives = 86/142 (60.56%), Query Frame = 1
Query:  292 HAGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            ++GY K   S    + Y+F ES ++ +  PVV+WL GGPGCSS   +  E+GPF +  D ++L +N + W+  +N+LY++ P G GFSY+ DK     N+  V+   ++ LQ FF   P+   N  ++TGESYAG YIP  A
Sbjct:   50 YSGYLK--GSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDK-FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLA 188          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.515e-23
Identity = 55/143 (38.46%), Postives = 82/143 (57.34%), Query Frame = 1
Query:  292 HAGYYKLPHSHDAKMFYFFFESRNSK-KDPVVIWLTGGPGCSS-ELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRH-NEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            ++GY  +       +FY+  E+       P+V+WL GGPGCSS  +  F ENGPF    ++ LV N+H W++ +N+LY++ P G GFSY ++       N+   + D   FLQ +F + P+      +ITGESYAGHY+P  A
Sbjct:   48 YSGYVTIDEKKQRALFYYLAEAETKPISKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGSI-LVRNQHSWNQEANMLYLETPVGVGFSYANESSSYEGVNDKITAKDNLVFLQKWFLKFPQYLNRSLFITGESYAGHYVPQLA 189          
The following BLAST results are available for this feature:
BLAST of FC920505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
SCP18_ARATH3.986e-2434.97Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]
PPGB_BOVIN3.986e-2441.55Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]
SCP50_ARATH5.206e-2438.51Serine carboxypeptidase-like 50 OS=Arabidopsis tha... [more]
SCP16_ARATH5.206e-2439.44Serine carboxypeptidase-like 16 OS=Arabidopsis tha... [more]
SCP45_ARATH6.799e-2439.86Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]
CBP2_WHEAT6.799e-2439.33Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
CBP2_HORVU8.880e-2439.31Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
SCP36_ARATH1.160e-2334.59Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
PPGB_HUMAN1.160e-2340.85Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
SCP46_ARATH1.515e-2338.46Serine carboxypeptidase-like 46 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC32009C08EF RVDevelop1 Citrus clementina cDNA clone C32009C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920505 ID=FC920505; Name=FC920505; organism=Citrus clementina; type=EST; length=712bp
ACAGAAGATGGAGAAAATCAAATATTTTTCGGTCTAGTTCTCTCTCTGCT
ATTCGTCTCGCCATCGGCATTTCTATTAAACGACCGTCGTTTGGGTGCCT
CAACATTTCCGTCCTTACAGGCGGAGAAGCTGATCAGGCAGCTCAACTTG
TTCCCCAAGGAGGATGTCAACCTGGTCGACGGCCGTCAATCGGCTCCGTT
GTTGGCCGGAACTGGGAAGAGGATCGTCGAGAAGCGGATTAACTTGTTGA
GGGAGTCCGGTGGTGGAGTCTCCGTCGAGGATTTGGGGCATCATGCTGGA
TATTACAAGCTTCCCCACTCTCACGACGCTAAGATGTTTTACTTCTTCTT
CGAATCACGCAACAGCAAGAAGGATCCTGTTGTAATCTGGTTGACTGGAG
GGCCCGGGTGCAGTAGTGAATTGGCTGTATTTTATGAAAATGGTCCGTTC
AGTATTGCAGATAATATGTCTCTTGTTTGGAACGAGCATGGTTGGGATAA
GGCATCAAACCTTCTGTATGTTGATCAACCTACTGGGACTGGGTTTAGTT
ACACTTCTGATAAACGTGACATTCGTCACAATGAANATGGAGTTAGCAAT
GACCTCTATGACTTCTTACAGGCCTTCTTTGAGGAGCATCCTAAGCTTGC
AGAGAATGACTTCTATATAACTGGGGAATCATATGCTGGGCACTATATTC
CTGCATTTGCTG
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