FC920505

Overview
NameFC920505
Unique NameFC920505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.515e-23
Identity = 58/169 (34.32%), Postives = 94/169 (55.62%), Query Frame = 1
Query:  214 GKRIVEKRINLLRESGGGVSVEDLGHHAGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRH-NEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            G+   +  +  L    G + V+    + GY     +    +FY+FFES RN  +DP+V+W  GGPGCSS      E+G F + AD  ++  N + W++ SN+LY++QP G GFSY++   D ++ N+   ++D+ + L+ F    P+    + Y+ GESY G Y+P  A
Sbjct:    8 GQTAQDHLVTQLPGLSGNIGVKS---YTGYLLANATRGRYLFYWFFESMRNPSQDPLVMWTNGGPGCSSLGGEASEHGLFLVNADGATITRNPYSWNRVSNILYIEQPVGVGFSYSNSTDDYQNLNDVQAASDMNNALRDFLTRFPQFIGRETYLAGESYGGVYVPTTA 173          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.407e-23
Identity = 59/143 (41.26%), Postives = 80/143 (55.94%), Query Frame = 1
Query:  295 AGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSS-ELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRD-IRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            +GY  +  +    +FY+  E+ R S   P+V+WL GGPGCSS       E GPF +  D  +L  N + W+K +N+L++D P G GFSYT+   D +   +     D Y FL  + E  P+  E  FYI GESYAGHYIP  A
Sbjct:   54 SGYVTVDPAAGRALFYWLTEAPRPSGTKPLVLWLNGGPGCSSIAYGASEEVGPFRVNPDGKTLRLNLYAWNKVANVLFLDSPAGVGFSYTNTSSDELTVGDKRTGEDAYRFLVRWLERFPEYKERAFYIAGESYAGHYIPELA 196          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.407e-23
Identity = 58/153 (37.91%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  262 GGVSVEDLGHHAGYYKLPHSHDAKMFYFFFES---RNSKKDPVVIWLTGGPGCSS-ELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDI-RHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIP 702
            G  S  D   ++GY  +       +FY+  ES   R+ K  P+V+WL GGPGCSS       E GPF + +D  +L    + W+K +NLL+++ P G GFSY++   D+    +   + D Y FL  +FE  P+    +FYI GESYAGH++P
Sbjct:   39 GQPSNVDFRQYSGYVTVHEERGRALFYWLVESPLARDPKSRPLVLWLNGGPGCSSVAYGAAEEIGPFRVGSDGKTLHSKLYAWNKLANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNWFERFPQYKHREFYIVGESYAGHFVP 191          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: CPS1_PENJA (Carboxypeptidase S1 OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.756e-23
Identity = 57/157 (36.31%), Postives = 91/157 (57.96%), Query Frame = 1
Query:  247 LRESGGGVSVEDLGHHAGYYKLPHSHDAKMFYFFFESRNSKKD-PVVIWLTGGPGCSSELAVFYENGPFSIADNMSL-VWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            ++ SG   +   +  ++GY  +    +  M+++FFE+RN+ +  P+  W  GGPGCSS + +F ENGP    +  S    NE+ W+  +N++Y+DQP G GFSY +D  D+  +    +  +++ LQAF+ + P+    DF I  ESY GHY P FA
Sbjct:    2 VKNSGICETTPGVNQYSGYLSV--GSNMNMWFWFFEARNNPQQAPLAAWFNGGPGCSSMIGLFQENGPCHFVNGDSTPSLNENSWNNYANMIYIDQPIGVGFSYGTD--DVT-STVTAAPYVWNLLQAFYAQRPEYESRDFAIFTESYGGHYGPEFA 153          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22
Identity = 50/143 (34.97%), Postives = 81/143 (56.64%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFESRNS-KKDPVVIWLTGGPGCSSELAVFYENGPFSIADNM------SLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +    + + FY+F +S N+ K+DP++IWL GGPGCS    + +ENGP  +   +      SL    + W K +N++++DQP G+GFSY+    D +  +       ++FLQ +   HP+   N  Y+ G+SY+G  +PA
Sbjct:   40 GYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPID-KTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPA 181          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22
Identity = 54/142 (38.03%), Postives = 77/142 (54.23%), Query Frame = 1
Query:  295 AGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSS-ELAVFYENGPF-SIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            AGY  +       +FY+F E+ +     P+ +WL GGPGCSS     F E GPF    D   L  N   W+KASNLL+VD P G G+SY++   D    +   + D+  F+  + E+ P+    + ++ GESYAGHY+P  A
Sbjct:   53 AGYVDIDVKAGRSLFYYFVEAEKQPHSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDARGLRRNPKSWNKASNLLFVDSPAGVGWSYSNTTSDYTTGDESTAKDMLVFMLRWLEKFPQFKTRNLFLAGESYAGHYVPQLA 194          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22
Identity = 55/143 (38.46%), Postives = 83/143 (58.04%), Query Frame = 1
Query:  286 GHHAGYYKLPHSHDAKMFYFFFESRNSKKD--PVVIWLTGGPGCSS-ELAVFYENGPFSIADN-MSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIP 702
            G + GY  +  ++   ++Y+F E+  +     P+V+WL GGPGCSS  L    E GPF +  N  SL+ NE+ W+KA+N+L+ + P G  FSY++   D+   +  ++ D Y FL  +FE  P     +FYI GES  GH+IP
Sbjct:   78 GMYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGPFRVHTNGESLLLNEYAWNKAANILFAESPAGVVFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES--GHFIP 218          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: YSS2_CAEEL (Uncharacterized serine carboxypeptidase K10B2.2 OS=Caenorhabditis elegans GN=K10B2.2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = 1
Query:  280 DLGHHAGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIAD-NMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            D  H++GY +     D  + Y+  ES R   +DP+V+WL GGPGCSS   +  E GPF + D   S+ +NE+ W+K +N+L+++ P G G+SY S   ++  ++  VS   Y  L  F  + P+    DF+ITGESYAG YIP  A
Sbjct:   37 DFFHYSGYLRA--WTDKYLHYWLTESSRAPTQDPLVLWLNGGPGCSSLDGLIEELGPFHVKDFGNSIYYNEYAWNKFANVLFLESPAGVGYSY-STNFNLTVSDDEVSLHNYMALLDFLSKFPEYKGRDFWITGESYAGVYIPTLA 179          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 55/166 (33.13%), Postives = 86/166 (51.81%), Query Frame = 1
Query:  232 KRINLLRESGGGVSVEDLGHHAGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRH----NEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            K  +L+++  G  S      + GY  +       ++Y+F E+ + +   P+VIW  GGP CSS    F E GPF + +    L  N + W+  +N+L+++ P  TGFSY+S+  D+       +   + D Y FL  + E  P+    D YI G+SYAGHY+P  A
Sbjct:   60 KEKDLIKKLPGQPSGVSFRQYGGYVPVNEPSSRFLYYYFVEAIKPNTSTPLVIWFNGGPACSSLGGAFLELGPFRVHSGGRKLFRNPYSWNNEANVLFLESPVTTGFSYSSNPIDLEELGEKGDKATAEDNYIFLMNWLERFPEYKGRDIYIAGQSYAGHYVPQLA 225          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.873e-22
Identity = 56/145 (38.62%), Postives = 81/145 (55.86%), Query Frame = 1
Query:  292 HAGYYKLPHSHDAKMFYFFFESRNSKKD--PVVIWLTGGPGCSS-ELAVFYENGPFSIADNMS-LVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHN-EXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            ++GY  +  SH   +FY+  ES +      P+++WL GGPGCSS       E GPF I    S L  N+  W+K +NLL+++ P G G+SYT+   D++ + +   + D   FL  +    P+    DFYI GESYAGHY+P  A
Sbjct:   47 YSGYVNVNQSHGRALFYWLTESSSPSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRINKTGSNLYLNKFAWNKDANLLFLESPAGVGYSYTNTSSDLKDSGDERTAQDNLIFLIKWLSRFPQYKYRDFYIAGESYAGHYVPQLA 191          
The following BLAST results are available for this feature:
BLAST of FC920505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
NF314_NAEFO1.515e-2334.32Virulence-related protein Nf314 OS=Naegleria fowle... [more]
SCP28_ARATH4.407e-2341.26Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
SCP27_ARATH4.407e-2337.91Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
CPS1_PENJA5.756e-2336.31Carboxypeptidase S1 OS=Penicillium janthinellum PE... [more]
SCP8_ARATH1.282e-2234.97Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP44_ARATH2.187e-2238.03Serine carboxypeptidase-like 44 OS=Arabidopsis tha... [more]
HNLS_SORBI2.187e-2238.46P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]
YSS2_CAEEL3.731e-2240.41Uncharacterized serine carboxypeptidase K10B2.2 OS... [more]
SCP37_ARATH3.731e-2233.13Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]
SCP24_ARATH4.873e-2238.62Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionC32009C08EF RVDevelop1 Citrus clementina cDNA clone C32009C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920505 ID=FC920505; Name=FC920505; organism=Citrus clementina; type=EST; length=712bp
ACAGAAGATGGAGAAAATCAAATATTTTTCGGTCTAGTTCTCTCTCTGCT
ATTCGTCTCGCCATCGGCATTTCTATTAAACGACCGTCGTTTGGGTGCCT
CAACATTTCCGTCCTTACAGGCGGAGAAGCTGATCAGGCAGCTCAACTTG
TTCCCCAAGGAGGATGTCAACCTGGTCGACGGCCGTCAATCGGCTCCGTT
GTTGGCCGGAACTGGGAAGAGGATCGTCGAGAAGCGGATTAACTTGTTGA
GGGAGTCCGGTGGTGGAGTCTCCGTCGAGGATTTGGGGCATCATGCTGGA
TATTACAAGCTTCCCCACTCTCACGACGCTAAGATGTTTTACTTCTTCTT
CGAATCACGCAACAGCAAGAAGGATCCTGTTGTAATCTGGTTGACTGGAG
GGCCCGGGTGCAGTAGTGAATTGGCTGTATTTTATGAAAATGGTCCGTTC
AGTATTGCAGATAATATGTCTCTTGTTTGGAACGAGCATGGTTGGGATAA
GGCATCAAACCTTCTGTATGTTGATCAACCTACTGGGACTGGGTTTAGTT
ACACTTCTGATAAACGTGACATTCGTCACAATGAANATGGAGTTAGCAAT
GACCTCTATGACTTCTTACAGGCCTTCTTTGAGGAGCATCCTAAGCTTGC
AGAGAATGACTTCTATATAACTGGGGAATCATATGCTGGGCACTATATTC
CTGCATTTGCTG
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