FC920505

Overview
NameFC920505
Unique NameFC920505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5884 contig Ccv1_Contig5884:1..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: YUW5_CAEEL (Uncharacterized serine carboxypeptidase F41C3.5 OS=Caenorhabditis elegans GN=F41C3.5 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.312e-22
Identity = 50/140 (35.71%), Postives = 86/140 (61.43%), Query Frame = 1
Query:  289 HHAGYYKLPHSHDAKMFYFFFESRNS-KKDPVVIWLTGGPGCSSELAVFYENGPF-SIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIP 702
            H++G++++  +H   + Y+F ES+N    DP++ W  GGPGCSS   +  E GP+ +  D  +L  NE+ W+K ++++Y++ P G G+SY +D  +I  N+   S + Y+ ++ FF E P+   +  +I GESY G Y+P
Sbjct:   33 HYSGFFQVSDNH--VLHYWFVESQNEPSNDPLIFWFNGGPGCSSLDGLLNEMGPYVANEDGKTLRENEYSWNKMASVVYIESPAGVGYSYATD-GNITTNDDLTSLENYEAVKQFFTEFPQFRHHQTFIMGESYGGVYVP 169          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: KEX1_YEAST (Carboxypeptidase KEX1 OS=Saccharomyces cerevisiae GN=KEX1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.852e-21
Identity = 60/158 (37.97%), Postives = 85/158 (53.80%), Query Frame = 1
Query:  292 HAGYYKLPHSHDAK------MFYFFFESRNSKKD-----PVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDL-------YDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            HAG+  L  S DA       + YFF++  N+  +     P++IWL GGPGCSS      E+GPF +  +  L  NE  W    +LL++DQPTGTGFS   +K + + ++     DL        DFL+ +F+  P+       ++GESYAG YIP FA
Sbjct:   52 HAGHIPL-RSEDADEQDSSDLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFA 208          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.125e-21
Identity = 55/143 (38.46%), Postives = 80/143 (55.94%), Query Frame = 1
Query:  295 AGYYKLPHSHDAKMFYFFFESRNSKKD-PVVIWLTGGPGCSS-ELAVFYENGPFSIADNMS-LVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHN-EXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            +GY  +  SH   +FY+  ES +S    P+++WL GGPGCSS       E GPF I    S L  N+  W+  +N+L+++ P G GFSYT+   D++ + +   + +   FL  +    P+    DFYI GESYAGHY+P  A
Sbjct:   46 SGYVTVNESHGRSLFYWLTESPSSSHTKPLLLWLNGGPGCSSIGYGASEEIGPFRINKTGSNLYLNKFTWNTEANILFLESPAGVGFSYTNTSSDLKDSGDERTAQENLIFLIKWMSRFPQYQYRDFYIVGESYAGHYVPQLA 188          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.125e-21
Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = 1
Query:  295 AGYYKLPHSHDAKMFYFFFESRNSKKD--PVVIWLTGGPGCSS-ELAVFYENGPFSIADN-MSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHN-EXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            +GY  +  SH   +FY+  ES +      P+++WL GGPGCSS       E GPF I+    +L  N   W+  +NLL+++ P G GFSYT+   D   + +   + +   FL ++    P+    DFYI GESYAGHY+P  A
Sbjct:   46 SGYVTVNESHGRSLFYWLTESSSHSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRISKTGCNLYLNNFSWNTEANLLFLESPVGVGFSYTNTSSDFEESGDERTAQENLIFLISWMSRFPQYRYRDFYIVGESYAGHYVPQLA 189          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP38_ARATH (Serine carboxypeptidase-like 38 OS=Arabidopsis thaliana GN=SCPL38 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20
Identity = 58/167 (34.73%), Postives = 86/167 (51.50%), Query Frame = 1
Query:  232 KRINLLRESGGGVSVEDLGHHAGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSE-LAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIR----HNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            K  +L+ +  G  S      + GY  +       ++Y+F E+ + SK  P+V+W  GGPGCSS     F E GPF + +D  +L  N + W+  +N+L+ + P   GFSY+S   D        +   + D Y FL  + E  P+    D YI+G+SYAGHYIP  A
Sbjct:   59 KEKDLIEKLPGQPSGISFRQYGGYVAVNEPATRFLYYYFVEAIKPSKSTPLVLWFNGGPGCSSVGFGAFEELGPFRVHSDGKTLYRNPYSWNNEANMLFFEGPISVGFSYSSTPFDWEIFGEQADKLTAEDNYMFLVNWLERFPEYKGRDVYISGQSYAGHYIPQLA 225          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.674e-20
Identity = 55/143 (38.46%), Postives = 77/143 (53.85%), Query Frame = 1
Query:  295 AGYYKLPHSHDAKMFYFFFESRNSK-KDPVVIWLTGGPGCSS-ELAVFYENGPFSIADNMS-LVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHN-EXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            +GY  +       +FY+  E+ +     P+VIWL GGPGCSS       E GPF I+   S L  N+  W+  SNLL+++ P G GFSYT+   D+ +  +   + D   FL  +    P+    + YITGESYAGHY+P  A
Sbjct:   53 SGYVTVDKLSGRSLFYWLTEASDLPLSKPLVIWLNGGPGCSSVAYGASEEIGPFRISKGGSGLYLNKFAWNSISNLLFLEAPAGVGFSYTNRSSDLFNTGDRRTAKDSLQFLIQWLHRFPRYNHREIYITGESYAGHYVPQLA 195          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: YPP3_CAEEL (Uncharacterized serine carboxypeptidase F32A5.3 OS=Caenorhabditis elegans GN=F32A5.3 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20
Identity = 55/141 (39.01%), Postives = 77/141 (54.61%), Query Frame = 1
Query:  292 HAGYYKLPHSHDAKMFYFFFESR-NSKKDPVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSY-TSDKRDIRHNEXGVSNDLYDFLQAFFE-EHPKLAENDFYITGESYAGHYIP 702
            ++GY     +   KM Y   ESR N   DP+++W  GGPGCSS   +F E GPF +  D  +L  N + W+  +N+LY++ P G G+SY T+     + N+   +   Y  L  FF    PK     FY++GESYAG YIP
Sbjct:   39 YSGYVDANANGTWKMHYMLTESRSNPDTDPLLVWFNGGPGCSSLGGLFEELGPFYVNFDGQTLYENPYAWNAKANVLYLESPIGVGYSYDTTTPGYFQANDDQSAAQNYQALTNFFNVAQPKYTNRTFYLSGESYAGIYIP 179          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: YXD2_CAEEL (Uncharacterized serine carboxypeptidase C08H9.1 OS=Caenorhabditis elegans GN=C08H9.1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.043e-19
Identity = 52/152 (34.21%), Postives = 81/152 (53.29%), Query Frame = 1
Query:  262 GGVSVEDLGHHAGYYKLPHSHDAKMFYFFFESRNSK--KDPVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDI-RHNEXGVSNDLYDFLQAFFE-EHPKLAENDFYITGESYAGHYIP 702
            G   + DL   +GY     +   KMFYF  E+R+    +  ++IW  GGPGCSS  A F E GP  +     SL  N H W   +N+L+++ P G GFSY +++ +  + N+  ++   ++ +  FF+ +H     +DF+I  ESY G Y P
Sbjct:   28 GNSDIPDLKLQSGYLNANENGTQKMFYFLLEARDIPVGEASLIIWFNGGPGCSSLSAFFEEFGPLYVNFGGKSLFENVHSWYHKANILFLESPIGVGFSYDTEQSNFTKVNDDSIAEQNFNSVIDFFQRKHSSYVNHDFFIAAESYGGVYGP 179          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: PEPS_ASPSA (Carboxypeptidase cpdS OS=Aspergillus saitoi GN=cpdS PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.720e-17
Identity = 53/147 (36.05%), Postives = 75/147 (51.02%), Query Frame = 1
Query:  280 DLGH-HAGYYKLPHSHDAKMFYFFFESRN-SKKDPVVIWLTGGPGCSSELAVFYENGPFS-IADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            D+G  +AG      + ++ +F++FF S+N    D + IWL GGPGCSS   +  ENGPF         V N + W   +N++Y+DQP GTGFS      +   +     N  +      F+ H +      YITGESYAG Y+P  A
Sbjct:   73 DVGESYAGLLPNTPTGNSSLFFWFFPSQNPDASDEITIWLNGGPGCSSLDGLLQENGPFLWQPGTYKPVPNPYSWTNLTNVVYIDQPAGTGFSPGPSTVNDEEDVAAQFNSWFKHFVDTFDLHGR----KVYITGESYAGMYVPYIA 215          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCPB_TRIRU (Carboxypeptidase S1 homolog B OS=Trichophyton rubrum GN=SCPB PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 64/218 (29.36%), Postives = 87/218 (39.91%), Query Frame = 1
Query:  208 GTGKRIVEKRINLLRESGGGVSVEDLGHHAGYYKLP----------HSHDAKMFYFFFESRNSKKD-PVVIWLTGGPGCSSELAVFYENGP-FSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSY-------------------------------------TSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKL--AENDFYITGESYAGHYIPAF 708
            G+G RI  K      E G   + E +  +AGY  LP            +    F++FFE+R   ++ P+ IW+ GGPG SS   +  ENGP F  AD+ S   N H W+   N+LY+DQP   G SY                                     + +     H     +  L+ F Q +F+E P      N   I  ESY G Y PAF
Sbjct:   38 GSGARITYK------EPGLCETTEGVKSYAGYVHLPPGTLRDFGVEQDYPINTFFWFFEARKDPENAPLGIWMNGGPGSSSMFGMMTENGPCFVNADSNSTRLNPHSWNNEVNMLYIDQPVQVGLSYDTLANFTRNLVTDEITKLKPGEPIPEQNATFLVGTYASRNMNTTAHGTRHAAMALWHFAQVWFQEFPGYHPRNNKISIATESYGGRYGPAF 249          
The following BLAST results are available for this feature:
BLAST of FC920505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
YUW5_CAEEL8.312e-2235.71Uncharacterized serine carboxypeptidase F41C3.5 OS... [more]
KEX1_YEAST1.852e-2137.97Carboxypeptidase KEX1 OS=Saccharomyces cerevisiae ... [more]
SCP23_ARATH4.125e-2138.46Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
SCP22_ARATH4.125e-2137.50Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
SCP38_ARATH1.200e-2034.73Serine carboxypeptidase-like 38 OS=Arabidopsis tha... [more]
SCP25_ARATH2.674e-2038.46Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
YPP3_CAEEL7.780e-2039.01Uncharacterized serine carboxypeptidase F32A5.3 OS... [more]
YXD2_CAEEL5.043e-1934.21Uncharacterized serine carboxypeptidase C08H9.1 OS... [more]
PEPS_ASPSA4.720e-1736.05Carboxypeptidase cpdS OS=Aspergillus saitoi GN=cpd... [more]
SCPB_TRIRU2.590e-1529.36Carboxypeptidase S1 homolog B OS=Trichophyton rubr... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32009C08EF RVDevelop1 Citrus clementina cDNA clone C32009C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920505 ID=FC920505; Name=FC920505; organism=Citrus clementina; type=EST; length=712bp
ACAGAAGATGGAGAAAATCAAATATTTTTCGGTCTAGTTCTCTCTCTGCT
ATTCGTCTCGCCATCGGCATTTCTATTAAACGACCGTCGTTTGGGTGCCT
CAACATTTCCGTCCTTACAGGCGGAGAAGCTGATCAGGCAGCTCAACTTG
TTCCCCAAGGAGGATGTCAACCTGGTCGACGGCCGTCAATCGGCTCCGTT
GTTGGCCGGAACTGGGAAGAGGATCGTCGAGAAGCGGATTAACTTGTTGA
GGGAGTCCGGTGGTGGAGTCTCCGTCGAGGATTTGGGGCATCATGCTGGA
TATTACAAGCTTCCCCACTCTCACGACGCTAAGATGTTTTACTTCTTCTT
CGAATCACGCAACAGCAAGAAGGATCCTGTTGTAATCTGGTTGACTGGAG
GGCCCGGGTGCAGTAGTGAATTGGCTGTATTTTATGAAAATGGTCCGTTC
AGTATTGCAGATAATATGTCTCTTGTTTGGAACGAGCATGGTTGGGATAA
GGCATCAAACCTTCTGTATGTTGATCAACCTACTGGGACTGGGTTTAGTT
ACACTTCTGATAAACGTGACATTCGTCACAATGAANATGGAGTTAGCAAT
GACCTCTATGACTTCTTACAGGCCTTCTTTGAGGAGCATCCTAAGCTTGC
AGAGAATGACTTCTATATAACTGGGGAATCATATGCTGGGCACTATATTC
CTGCATTTGCTG
back to top