FC920505

Overview
NameFC920505
Unique NameFC920505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SPCA_NANOT (Carboxypeptidase S1 homolog A OS=Nannizzia otae (strain CBS 113480) GN=SCPA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15
Identity = 51/171 (29.82%), Postives = 76/171 (44.44%), Query Frame = 1
Query:  319 SHDAKMFYFFFESRNSKKD-PVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSY-------------------------------------TSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAEND--FYITGESYAGHYIPAF 708
            ++    F++FFE+R   K+ P+ IWL GGPG SS + +F ENGP  +  D+ S   N + W+   N+LY+DQP   GFSY                                     + +     +N    +  ++ F Q +F+E P+   N+    I  ESY G Y PAF
Sbjct:   77 NYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGPCMVNNDSNSTTNNPYSWNNKVNMLYIDQPNQVGFSYDVPTNVTVNPINDEVTVADFSNGVPEQNNTLLVGTLGSQNPYATANNTQNAARSIWHFAQVWFQEFPEYKPNNDKVSIWTESYGGRYGPAF 247          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SXA2_SCHPO (Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe GN=sxa2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 46/141 (32.62%), Postives = 73/141 (51.77%), Query Frame = 1
Query:  292 HAGYYKLPHSHDAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNM-SLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            ++GY  L  + D  +FY +  +     +  ++WL GGPGC+  L  F ENGP  I+ +  S   N   W   +N+L++DQP GTG+S           E   S+D  + L++F+++ P L +   Y+ GESY   +   FA
Sbjct:   75 YSGY--LEANSDKSLFYTYAPAVVDS-ETFIVWLQGGPGCAGTLGFFSENGPIEISQSSPSPSLNPESWTNFANMLWLDQPFGTGYSQGQAAYTTTIEE--ASSDFVNALKSFYQKFPHLMKKKLYLVGESYGSIWSANFA 210          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SPCA_TRIRU (Carboxypeptidase S1 homolog A OS=Trichophyton rubrum GN=SCPA PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 52/172 (30.23%), Postives = 75/172 (43.60%), Query Frame = 1
Query:  319 SHDAKMFYFFFESRNSKKD-PVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSY-------------------------------------TSDKRDIRHNEXGVSNDLYDFLQAFFEEHP--KLAENDFYITGESYAGHYIPAFA 711
            ++    F++FFE+R   K+ P+ IWL GGPG SS + +F ENGP  +  D+ S   N   W+   N+LY+DQP   GFSY                                     + +     +N    +  ++ F Q +F+E P  K   N   I  ESY G Y P+FA
Sbjct:   77 NYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGPCWVNEDSKSTTNNSFSWNNKVNMLYIDQPNQVGFSYDVPTNITYSTINDTISVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFA 248          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SPCA_TRIEQ (Carboxypeptidase S1 homolog A OS=Trichophyton equinum GN=SCPA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 58/196 (29.59%), Postives = 84/196 (42.86%), Query Frame = 1
Query:  247 LRESGGGVSVEDLGHHAGYYKLPHSHDAKMFYFFFESRNSKKD-PVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSY-------------------------------------TSDKRDIRHNEXGVSNDLYDFLQAFFEEHP--KLAENDFYITGESYAGHYIPAFA 711
            +R   G V +    +  G Y+   ++    F++FFE+R   K+ P+ IWL GGPG SS + +F ENGP  I  D+ S   N   W+   N+LY+DQP   GFSY                                     + +     +N    +  ++ F Q +F+E P  K   N   I  ESY G Y P+FA
Sbjct:   56 VRSFTGHVHLPPDDNDFGVYR---NYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGPCWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFSYDELTNITYSTINDTVYVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFA 248          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCPA_TRITO (Carboxypeptidase S1 homolog A OS=Trichophyton tonsurans GN=SCPA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 58/196 (29.59%), Postives = 84/196 (42.86%), Query Frame = 1
Query:  247 LRESGGGVSVEDLGHHAGYYKLPHSHDAKMFYFFFESRNSKKD-PVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSY-------------------------------------TSDKRDIRHNEXGVSNDLYDFLQAFFEEHP--KLAENDFYITGESYAGHYIPAFA 711
            +R   G V +    +  G Y+   ++    F++FFE+R   K+ P+ IWL GGPG SS + +F ENGP  I  D+ S   N   W+   N+LY+DQP   GFSY                                     + +     +N    +  ++ F Q +F+E P  K   N   I  ESY G Y P+FA
Sbjct:   56 VRSFTGHVHLPPDDNDFGVYR---NYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGPCWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFSYDELTNITYSTINDTVYVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFA 248          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCPB_NANOT (Carboxypeptidase S1 homolog B OS=Nannizzia otae (strain CBS 113480) GN=SCPB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14
Identity = 61/204 (29.90%), Postives = 83/204 (40.69%), Query Frame = 1
Query:  250 RESGGGVSVEDLGHHAGYYKLP----------HSHDAKMFYFFFESRNSKKD-PVVIWLTGGPGCSSELAVFYENGP-FSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSY----------------------------------TSDKRDIRHNEXGVSN---DLYDFLQAFFEEHPKLAEND--FYITGESYAGHYIPAF 708
            +E G   + E +  +AGY  LP            +    F++FFE+R   ++ P+ IW+ GGPG SS   +  ENGP F   D+ S   N H W+   N+LY+DQP   G SY                                  T   R++     G  N    L+ F Q +F+E P     D    I  ESY G Y PAF
Sbjct:   46 KEPGLCETTEGVKSYAGYVHLPPGTLKDLGVEQDYPINTFFWFFEARKDPENAPLSIWMNGGPGSSSMFGMMTENGPCFVNPDSNSTRLNPHSWNNEVNMLYLDQPVQVGLSYDTLANFTRNLVTDEITKLEPGDPIPEQNATFLVGTYASRNMDTTAKGTRNAAIALWHFAQVWFQEFPGYHPRDSRISIATESYGGRYGPAF 249          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: PEPF_ASPNG (Serine-type carboxypeptidase F OS=Aspergillus niger GN=pepF PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 49/144 (34.03%), Postives = 73/144 (50.69%), Query Frame = 1
Query:  280 DLGH-HAGYYKLPHSHDAKMFYFFFESRNSKK-DPVVIWLTGGPGCSSELAVFYENGPFS-IADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIP 702
            DLG  ++G   +   + ++  +F F+    +  D + IWL GGPGCSS  A   ENG F         V N + W   +N+L+VDQP GTGFS          +E  ++ D   F +  +++   +     Y+TGESYAG Y+P
Sbjct:   79 DLGEMYSGLVPIEKGNVSRSLFFVFQPTIGEPVDEITIWLNGGPGCSSLEAFLQENGRFVWQPGTYQPVENPYSWVNLTNVLWVDQPVGTGFSLGVPTAT---SEEEIAEDFVKFFKN-WQQIFGIKNFKIYVTGESYAGRYVP 218          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: RISC_HUMAN (Retinoid-inducible serine carboxypeptidase OS=Homo sapiens GN=SCPEP1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 48/127 (37.80%), Postives = 68/127 (53.54%), Query Frame = 1
Query:  325 DAKMFYFFFESRNSKKD----PVVIWLTGGPGCSSE-LAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAG 690
            DA MF++ + + NS K+    P+V+WL GGPG SS     F E GP     +  L   +  W +A++LL+VD P GTGFSY +       +   V++D+   L+ FF  H +     FYI  ESY G
Sbjct:   48 DAYMFWWLYYATNSCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPL----DSDLKPRKTTWLQAASLLFVDNPVGTGFSYVNGSGAYAKDLAMVASDMMVLLKTFFSCHKEFQTVPFYIFSESYGG 170          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: RISC_RAT (Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12
Identity = 46/127 (36.22%), Postives = 68/127 (53.54%), Query Frame = 1
Query:  325 DAKMFYFFFESRNSKKD----PVVIWLTGGPGCSSE-LAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAG 690
            DA+MF++ + + N  K+    P+V+WL GGPG SS     F E GP     +  L      W + ++LL+VD P GTGFSY +       +   V++D+   L++FF+ H +     FYI  ESY G
Sbjct:   48 DARMFWWLYYATNPCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPL----DTRLKPRNTTWLQWASLLFVDNPVGTGFSYVNTTDAYAKDLDTVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGG 170          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: RISC_MOUSE (Retinoid-inducible serine carboxypeptidase OS=Mus musculus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12
Identity = 46/127 (36.22%), Postives = 67/127 (52.76%), Query Frame = 1
Query:  325 DAKMFYFFFESRNSKKD----PVVIWLTGGPGCSSE-LAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAG 690
            DA MF++ + + N  K+    P+V+WL GGPG SS     F E GP     +  L      W + ++LL+VD P GTGFSY +       +   V++D+   L++FF+ H +     FYI  ESY G
Sbjct:   48 DAHMFWWLYYATNPCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPL----DTQLKPRNTTWLQWASLLFVDNPVGTGFSYVNTTDAYAKDLDTVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGG 170          
The following BLAST results are available for this feature:
BLAST of FC920505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
SPCA_NANOT7.535e-1529.82Carboxypeptidase S1 homolog A OS=Nannizzia otae (s... [more]
SXA2_SCHPO9.841e-1532.62Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe... [more]
SPCA_TRIRU9.841e-1530.23Carboxypeptidase S1 homolog A OS=Trichophyton rubr... [more]
SPCA_TRIEQ9.841e-1529.59Carboxypeptidase S1 homolog A OS=Trichophyton equi... [more]
SCPA_TRITO9.841e-1529.59Carboxypeptidase S1 homolog A OS=Trichophyton tons... [more]
SCPB_NANOT3.740e-1429.90Carboxypeptidase S1 homolog B OS=Nannizzia otae (s... [more]
PEPF_ASPNG1.088e-1334.03Serine-type carboxypeptidase F OS=Aspergillus nige... [more]
RISC_HUMAN1.856e-1337.80Retinoid-inducible serine carboxypeptidase OS=Homo... [more]
RISC_RAT1.203e-1236.22Retinoid-inducible serine carboxypeptidase OS=Ratt... [more]
RISC_MOUSE2.052e-1236.22Retinoid-inducible serine carboxypeptidase OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionC32009C08EF RVDevelop1 Citrus clementina cDNA clone C32009C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920505 ID=FC920505; Name=FC920505; organism=Citrus clementina; type=EST; length=712bp
ACAGAAGATGGAGAAAATCAAATATTTTTCGGTCTAGTTCTCTCTCTGCT
ATTCGTCTCGCCATCGGCATTTCTATTAAACGACCGTCGTTTGGGTGCCT
CAACATTTCCGTCCTTACAGGCGGAGAAGCTGATCAGGCAGCTCAACTTG
TTCCCCAAGGAGGATGTCAACCTGGTCGACGGCCGTCAATCGGCTCCGTT
GTTGGCCGGAACTGGGAAGAGGATCGTCGAGAAGCGGATTAACTTGTTGA
GGGAGTCCGGTGGTGGAGTCTCCGTCGAGGATTTGGGGCATCATGCTGGA
TATTACAAGCTTCCCCACTCTCACGACGCTAAGATGTTTTACTTCTTCTT
CGAATCACGCAACAGCAAGAAGGATCCTGTTGTAATCTGGTTGACTGGAG
GGCCCGGGTGCAGTAGTGAATTGGCTGTATTTTATGAAAATGGTCCGTTC
AGTATTGCAGATAATATGTCTCTTGTTTGGAACGAGCATGGTTGGGATAA
GGCATCAAACCTTCTGTATGTTGATCAACCTACTGGGACTGGGTTTAGTT
ACACTTCTGATAAACGTGACATTCGTCACAATGAANATGGAGTTAGCAAT
GACCTCTATGACTTCTTACAGGCCTTCTTTGAGGAGCATCCTAAGCTTGC
AGAGAATGACTTCTATATAACTGGGGAATCATATGCTGGGCACTATATTC
CTGCATTTGCTG
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