FC920510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: DHSA_RICTY (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia typhi GN=sdhA PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 2.566e-57 Identity = 86/131 (65.65%), Postives = 102/131 (77.86%), Query Frame = 2 Query: 257 TGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGK 649 T Y I+ H +D +++ G NTACITK+FPTRSHTVAAQGGI+AALGNM EDDWRWHMYDTVKGSDWLGDQDAI+YMC+ AP A++ELE+YG+PFSRTEDGKIYQR FGG + ++GK Sbjct: 2 TKAYNIIHHKFDVVVVGAGGAGLRSAFGMAKEGLNTACITKIFPTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTEDGKIYQRPFGGMTTEYGK 132 HSP 2 Score: 50.8322 bits (120), Expect = 2.566e-57 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 1 Query: 640 FWKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQXFV 753 + KG A R AADRTGHA+LHTLY Q++KH Q F+ Sbjct: 130 YGKGKAAQRTCAAADRTGHAILHTLYQQSLKHKVQFFI 167
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: DHSA_RICFE (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia felis GN=sdhA PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.345e-57 Identity = 86/131 (65.65%), Postives = 102/131 (77.86%), Query Frame = 2 Query: 257 TGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGK 649 T Y I+ H +D +++ G NTACITKLFPTRSHTVAAQGGI+AALGNM EDDWRWHMYDTVKGSDWLGDQDAI+YMC+ AP A++ELE+YG+PFSRTE+GKIYQR FGG + ++GK Sbjct: 2 TKAYNIIHHKFDVVVVGAGGAGLRSAFGMAKEGLNTACITKLFPTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTEEGKIYQRPFGGMTTEYGK 132 HSP 2 Score: 51.2174 bits (121), Expect = 3.345e-57 Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 1 Query: 640 FWKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQXFV 753 + KG A R AADRTGHA+LHTLY Q++KH Q FV Sbjct: 130 YGKGKAAQRTCAAADRTGHAILHTLYQQSLKHKVQFFV 167
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: DHSA_RICCN (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia conorii GN=sdhA PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.345e-57 Identity = 86/131 (65.65%), Postives = 102/131 (77.86%), Query Frame = 2 Query: 257 TGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGK 649 T Y I+ H +D +++ G NTACITKLFPTRSHTVAAQGGI+AALGNM EDDWRWHMYDTVKGSDWLGDQDAI+YMC+ AP A++ELE+YG+PFSRTE+GKIYQR FGG + ++GK Sbjct: 2 TKAYNIIHHKFDVVVVGAGGAGLRSAFGMAKEGLNTACITKLFPTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTEEGKIYQRPFGGMTTEYGK 132 HSP 2 Score: 51.2174 bits (121), Expect = 3.345e-57 Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 1 Query: 640 FWKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQXFV 753 + KG A R AADRTGHA+LHTLY Q++KH Q FV Sbjct: 130 YGKGKAAQRTCAAADRTGHAILHTLYQQSLKHKVQFFV 167
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: DHSA_RICPR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia prowazekii GN=sdhA PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.643e-56 Identity = 85/131 (64.89%), Postives = 101/131 (77.10%), Query Frame = 2 Query: 257 TGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGK 649 T Y I+ H +D +++ G NTACITK+FPTRSHTVAAQGGI+AALGNM EDDWRWHMYDTVKGSDWLGDQDAI+YMC+ AP A++ELE+YG+PFSRT DGKIYQR FGG + ++GK Sbjct: 2 TKAYNIIHHKFDVVVVGAGGAGLRSAFGMAKEGLNTACITKIFPTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTVDGKIYQRPFGGMTTEYGK 132 HSP 2 Score: 50.8322 bits (120), Expect = 1.643e-56 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 1 Query: 640 FWKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQXFV 753 + KG A R AADRTGHA+LHTLY Q++KH Q F+ Sbjct: 130 YGKGKAAQRTCAAADRTGHAILHTLYQQSLKHKVQFFI 167
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: DHSA_RICBR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia bellii (strain RML369-C) GN=sdhA PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.141e-56 Identity = 85/131 (64.89%), Postives = 101/131 (77.10%), Query Frame = 2 Query: 257 TGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGK 649 T Y I+ H +D ++E G NTACI+KLFPTRSHTVAAQGGI+AALGNM DDWRWHMYDTVKGSDWLGDQDAI+YMC+ AP A++ELE+YG+PFSRTE+GKIYQR FGG + ++GK Sbjct: 2 TKSYNIIHHKFDVIVVGAGGAGLRAAFGMAEEGLNTACISKLFPTRSHTVAAQGGISAALGNMGADDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTEEGKIYQRPFGGMTTEYGK 132 HSP 2 Score: 50.8322 bits (120), Expect = 2.141e-56 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 1 Query: 640 FWKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQXFV 753 + KG A R AADRTGHA+LHTLY Q++KH Q F+ Sbjct: 130 YGKGKAAQRTCAAADRTGHAILHTLYQQSLKHKVQFFI 167
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: DHSA_PARDE (Succinate dehydrogenase flavoprotein subunit OS=Paracoccus denitrificans GN=sdhA PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.603e-50 Identity = 78/128 (60.94%), Postives = 94/128 (73.44%), Query Frame = 2 Query: 266 YTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGK 649 Y H YD ++E G TAC+TK+FPTRSHTVAAQGGI A+L NM D+W+WHMYDTVKGSDWLGD DA++Y+ REAPKAV ELE+YG+PFSRTE+GKIYQR FGG + +FG+ Sbjct: 4 YKYETHEYDVVVVGAGGAGLRATLGMAEQGLRTACVTKVFPTRSHTVAAQGGIAASLSNMGPDNWQWHMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEEGKIYQRPFGGHTTEFGE 131 HSP 2 Score: 47.7506 bits (112), Expect = 4.603e-50 Identity = 20/38 (52.63%), Postives = 26/38 (68.42%), Query Frame = 1 Query: 640 FWKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQXFV 753 F +G R AADRTGHA+LHTLYGQ++K + F+ Sbjct: 129 FGEGPPVQRTCAAADRTGHAILHTLYGQSLKEKAEFFI 166
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: DHSA_SALTY (Succinate dehydrogenase flavoprotein subunit OS=Salmonella typhimurium GN=sdhA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.400e-45 Identity = 68/102 (66.67%), Postives = 86/102 (84.31%), Query Frame = 2 Query: 341 LSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFG 646 +S+ G A ++K+FPTRSHTV+AQGGI ALGN ED+W WHMYDTVKGSD++GDQDAI+YMC+ P+A++ELE+ GLPFSR +DG+IYQR FGGQS +FG Sbjct: 26 ISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFG 127 HSP 2 Score: 47.7506 bits (112), Expect = 2.400e-45 Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 1 Query: 649 GGQAYRCACAADRTGHALLHTLYGQAMKHNTQXF 750 G QA R A AADRTGHALLHTLY Q +K++T F Sbjct: 128 GEQAARTAAAADRTGHALLHTLYQQNLKNHTTIF 161
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: DHSA_ECOLI (Succinate dehydrogenase flavoprotein subunit OS=Escherichia coli (strain K12) GN=sdhA PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.400e-45 Identity = 68/102 (66.67%), Postives = 86/102 (84.31%), Query Frame = 2 Query: 341 LSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFG 646 +S+ G A ++K+FPTRSHTV+AQGGI ALGN ED+W WHMYDTVKGSD++GDQDAI+YMC+ P+A++ELE+ GLPFSR +DG+IYQR FGGQS +FG Sbjct: 26 ISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFG 127 HSP 2 Score: 47.7506 bits (112), Expect = 2.400e-45 Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 1 Query: 649 GGQAYRCACAADRTGHALLHTLYGQAMKHNTQXF 750 G QA R A AADRTGHALLHTLY Q +K++T F Sbjct: 128 GEQAARTAAAADRTGHALLHTLYQQNLKNHTTIF 161
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: DHSA_ECOL6 (Succinate dehydrogenase flavoprotein subunit OS=Escherichia coli O6 GN=sdhA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.400e-45 Identity = 68/102 (66.67%), Postives = 86/102 (84.31%), Query Frame = 2 Query: 341 LSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFG 646 +S+ G A ++K+FPTRSHTV+AQGGI ALGN ED+W WHMYDTVKGSD++GDQDAI+YMC+ P+A++ELE+ GLPFSR +DG+IYQR FGGQS +FG Sbjct: 26 ISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFG 127 HSP 2 Score: 47.7506 bits (112), Expect = 2.400e-45 Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 1 Query: 649 GGQAYRCACAADRTGHALLHTLYGQAMKHNTQXF 750 G QA R A AADRTGHALLHTLY Q +K++T F Sbjct: 128 GEQAARTAAAADRTGHALLHTLYQQNLKNHTTIF 161
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: DHSA_ECO57 (Succinate dehydrogenase flavoprotein subunit OS=Escherichia coli O157:H7 GN=sdhA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.400e-45 Identity = 68/102 (66.67%), Postives = 86/102 (84.31%), Query Frame = 2 Query: 341 LSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFG 646 +S+ G A ++K+FPTRSHTV+AQGGI ALGN ED+W WHMYDTVKGSD++GDQDAI+YMC+ P+A++ELE+ GLPFSR +DG+IYQR FGGQS +FG Sbjct: 26 ISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFG 127 HSP 2 Score: 47.7506 bits (112), Expect = 2.400e-45 Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 1 Query: 649 GGQAYRCACAADRTGHALLHTLYGQAMKHNTQXF 750 G QA R A AADRTGHALLHTLY Q +K++T F Sbjct: 128 GEQAARTAAAADRTGHALLHTLYQQNLKNHTTIF 161 The following BLAST results are available for this feature:
BLAST of FC920510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920510 ID=FC920510; Name=FC920510; organism=Citrus clementina; type=EST; length=754bpback to top |