FC920510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: DHSA_COXBU (Succinate dehydrogenase flavoprotein subunit OS=Coxiella burnetii GN=sdhA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.801e-37 Identity = 75/119 (63.03%), Postives = 92/119 (77.31%), Query Frame = 2 Query: 356 FNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGK-VGRRTVVHVLLTELVMLYCI 709 + A ++K+FPTRSHTV+AQGGI AALGN+ D WHM+DTVKGSD+LGDQDAIQYMC +AP +V ELE+YGLPFSR +DG+IYQRAFGG + DFGK + RRT T ML+ + Sbjct: 33 YKVAVVSKVFPTRSHTVSAQGGIAAALGNVVPDKPIWHMFDTVKGSDYLGDQDAIQYMCEQAPPSVYELEHYGLPFSRLDDGRIYQRAFGGHTRDFGKEMARRTCACADRTGHAMLHTL 151
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: FRDA_MYCTU (Fumarate reductase flavoprotein subunit OS=Mycobacterium tuberculosis GN=frdA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.161e-19 Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 359 NTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGG 628 + A ++K++P RSHTV+A+GG A G+ +D H +DTV G DWL DQDA++ EAPK +++LE++G P+SR DG++ R FGG Sbjct: 31 DVAIVSKVYPMRSHTVSAEGGAAAVTGD--DDSLDEHAHDTVSGGDWLCDQDAVEAFVAEAPKELVQLEHWGCPWSRKPDGRVAVRPFGG 118 HSP 2 Score: 25.7942 bits (55), Expect = 1.161e-19 Identity = 12/30 (40.00%), Postives = 19/30 (63.33%), Query Frame = 1 Query: 649 GGQAYRCACAADRTGHALLHTLYGQAMKHN 738 G + R AAD+TG LLHTL+ + + ++ Sbjct: 118 GMKKLRTWFAADKTGFHLLHTLFQRLLTYS 147
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: FRDA_MYCBO (Fumarate reductase flavoprotein subunit OS=Mycobacterium bovis GN=frdA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.161e-19 Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 359 NTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGG 628 + A ++K++P RSHTV+A+GG A G+ +D H +DTV G DWL DQDA++ EAPK +++LE++G P+SR DG++ R FGG Sbjct: 31 DVAIVSKVYPMRSHTVSAEGGAAAVTGD--DDSLDEHAHDTVSGGDWLCDQDAVEAFVAEAPKELVQLEHWGCPWSRKPDGRVAVRPFGG 118 HSP 2 Score: 25.7942 bits (55), Expect = 1.161e-19 Identity = 12/30 (40.00%), Postives = 19/30 (63.33%), Query Frame = 1 Query: 649 GGQAYRCACAADRTGHALLHTLYGQAMKHN 738 G + R AAD+TG LLHTL+ + + ++ Sbjct: 118 GMKKLRTWFAADKTGFHLLHTLFQRLLTYS 147
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: FRDA_PROVU (Fumarate reductase flavoprotein subunit OS=Proteus vulgaris GN=frdA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.527e-18 Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 365 ACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLD 640 A I+K++P RSHTVAA+GG +A D + +H DTV G DWL +QD + Y P + +LE +G P+SR EDG + R FGG ++ Sbjct: 34 ALISKVYPMRSHTVAAEGG--SAAVTQAHDSYDFHFNDTVSGGDWLCEQDVVDYFVEHCPTEMTQLELWGCPWSRKEDGSVNVRRFGGMKIE 123 HSP 2 Score: 26.5646 bits (57), Expect = 3.527e-18 Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 1 Query: 676 AADRTGHALLHTLYGQAMKH 735 AAD+TG +LHTL+ ++K+ Sbjct: 128 AADKTGFHMLHTLFQTSLKY 147
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: FRDA_HAEIN (Fumarate reductase flavoprotein subunit OS=Haemophilus influenzae GN=frdA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.214e-17 Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 2 Query: 365 ACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLD 640 A ++K++P R+HTVAA+GG A + ED + H DTV G DWL +QD ++Y + +P + +LE +G P+SR DG + R FGG ++ Sbjct: 34 ALVSKVYPMRTHTVAAEGGAAAVIKE--EDSYDKHFQDTVAGGDWLCEQDVVEYFVQHSPVEMTQLERWGCPWSRKADGDVNVRRFGGMKIE 123 HSP 2 Score: 25.409 bits (54), Expect = 2.214e-17 Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 1 Query: 676 AADRTGHALLHTLYGQAMKH 735 AAD+TG LLHTL+ ++++ Sbjct: 128 AADKTGFHLLHTLFQTSIQY 147
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: FRDA_ECOLI (Fumarate reductase flavoprotein subunit OS=Escherichia coli (strain K12) GN=frdA PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 4.864e-17 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 365 ACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLD 640 A I+K++P RSHTVAA+GG A + D + +H +DTV G DWL +QD + Y P + +LE +G P+SR DG + R FGG ++ Sbjct: 34 ALISKVYPMRSHTVAAEGGSAAVAQD--HDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIE 123 HSP 2 Score: 24.2534 bits (51), Expect = 4.864e-17 Identity = 9/19 (47.37%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 676 AADRTGHALLHTLYGQAMK 732 AAD+TG +LHTL+ +++ Sbjct: 128 AADKTGFHMLHTLFQTSLQ 146
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: Y033_METJA (Uncharacterized FAD-dependent oxidoreductase MJ0033 OS=Methanocaldococcus jannaschii GN=MJ0033 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 380 LFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLD 640 LF TV A+GG NA +D ++ H YDTVKG ++ + ++ + + APK ++ LE +G F RTEDG I QR FGGQS + Sbjct: 33 LFGKSGCTVMAEGGYNAVFN--PKDSFKKHFYDTVKGGGFINNPKLVEILVKNAPKELLNLERFGALFDRTEDGFIAQRPFGGQSFN 117
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: DHSA_BACSU (Succinate dehydrogenase flavoprotein subunit OS=Bacillus subtilis GN=sdhA PE=3 SV=4) HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-11 Identity = 36/80 (45.00%), Postives = 48/80 (60.00%), Query Frame = 2 Query: 392 RSHTVAAQGGINAALGNMTEDDWRW-HMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGG 628 RSH+V AQGGIN A+ E D W H DTV G D+L +Q ++ MC AP + L+ G+ F+RT +G + R FGG Sbjct: 39 RSHSVCAQGGINGAVNTKGEGDSPWEHFDDTVYGGDFLANQPPVKAMCEAAPSIIHLLDRMGVMFNRTPEGLLDFRRFGG 118
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: FRDA_HELPY (Fumarate reductase flavoprotein subunit OS=Helicobacter pylori GN=frdA PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.310e-11 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 347 EHGFNTACITKLFPTRSHTVAAQGGINAALGNMTE---DDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDG 601 + G NT ++ + RSH+ AAQGG+ A+L N + D+ H DTVKGSDW DQ + APKA+ EL ++G+P++R + G Sbjct: 26 QKGLNTIVLSLVPVRRSHSAAAQGGMQASLANAKKSEGDNEDLHFLDTVKGSDWGCDQQVARMFVTTAPKAIRELASWGVPWTRIKKG 113
BLAST of FC920510 vs. ExPASy Swiss-Prot
Match: FRDA_HELPJ (Fumarate reductase flavoprotein subunit OS=Helicobacter pylori J99 GN=frdA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.310e-11 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 347 EHGFNTACITKLFPTRSHTVAAQGGINAALGNMTE---DDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDG 601 + G NT ++ + RSH+ AAQGG+ A+L N + D+ H DTVKGSDW DQ + APKA+ EL ++G+P++R + G Sbjct: 26 QKGLNTIVLSLVPVRRSHSAAAQGGMQASLANAKKSEGDNEDLHFLDTVKGSDWGCDQQVARMFVTTAPKAIRELASWGVPWTRIKKG 113 The following BLAST results are available for this feature:
BLAST of FC920510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920510 ID=FC920510; Name=FC920510; organism=Citrus clementina; type=EST; length=754bpback to top |