FC920511
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920511 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33 Identity = 67/109 (61.47%), Postives = 82/109 (75.23%), Query Frame = 3 Query: 384 KIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GKYY 701 KIISR MF+ +L++RN+ CPA+ FYTYDAF+ AAK+FP+FG +G+ +RKRE+AAF QT HETTGGWP AP G YAWGYCF +E SS+YC P YPC GK Y Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERN-PSSNYCAPSPRYPCAPGKSY 111
BLAST of FC920511 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.526e-31 Identity = 65/113 (57.52%), Postives = 80/113 (70.80%), Query Frame = 3 Query: 372 GELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GKYY 701 G + I+SR F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ +KRE+AAF AQT HETTGGW AP G +AWGYCF +E G ASSDYC P+ +PC GK Y Sbjct: 23 GSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ASSDYCTPSAQWPCAPGKRY 134
BLAST of FC920511 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.308e-31 Identity = 69/172 (40.12%), Postives = 88/172 (51.16%), Query Frame = 3 Query: 198 GGSAGNCGSGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP----NYPCRGKYY 701 G AGN CP CCS G+CGLT+ +CC GC S C + MFE +L RN+ CP + FYTYDA+ A + +P FG +G++ RKRE+AAFFAQT ET+G + WGYC E+ +SDYCDP +YPC YY Sbjct: 27 GSQAGNA----TCPNDLCCSSGGYCGLTVAYCCAGCVSQCRNC--------------------FFTESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELN-PNSDYCDPKTKSSYPCVADYY 173
BLAST of FC920511 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.637e-30 Identity = 64/113 (56.64%), Postives = 79/113 (69.91%), Query Frame = 3 Query: 372 GELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GKYY 701 G + IIS F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ RKR++AAF AQT HETTGGW AP G +AWGYCF +E GAA +DYC P+ +PC GK Y Sbjct: 23 GSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAA-ADYCTPSAQWPCAPGKRY 134
BLAST of FC920511 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.878e-29 Identity = 60/111 (54.05%), Postives = 76/111 (68.47%), Query Frame = 3 Query: 378 LGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GKYY 701 + +IS+ +FE +L +RND+ C A+ FYTY+AFI A K F AFG +G+ R +EIAAF AQT HETTGGW AP G Y+WGYC+NRE G + DYC +PC GK Y Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQG-SPGDYCASSQQWPCAPGKKY 114
BLAST of FC920511 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 59/113 (52.21%), Postives = 73/113 (64.60%), Query Frame = 3 Query: 354 GTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG 692 G +G +G II+R MFE +L +R D+ C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF QT HETTGGW AP G +AWGYC E+ + DP Y RG Sbjct: 19 GASGQQAGVGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPS-----DPPYYGRG 125
BLAST of FC920511 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 3 Query: 375 ELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDY 665 ++G I++ ++F ++L+ RND RCPA+ FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG A G +A GYCF RE S + Sbjct: 18 DVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSGF 113
BLAST of FC920511 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.753e-24 Identity = 57/125 (45.60%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 354 GTAGDGG------ELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASS--DYCDPNYPC-RGKYY 701 G G GG + I+S +++ L +++D CPAR FYTY +F+ AA FP F +G RKRE+AAF AQ HETTGGW AP G YAWG C+ E+ SS D D +PC GK Y Sbjct: 35 GGGGGGGYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSY 159
BLAST of FC920511 vs. ExPASy Swiss-Prot
Match: CHIC_POPTR (Acidic endochitinase WIN6.2C (Fragment) OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.700e-24 Identity = 57/105 (54.29%), Postives = 67/105 (63.81%), Query Frame = 3 Query: 201 GSAGNCG---SGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGE-CDPDDGTAGDG--GELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAF 497 GSA CG +CPGG CCS +GWCG T+D+C DGCQS C+ G+ CD G GDG G L II + F+ LL++RND RC A FYTYDAFI AAK F Sbjct: 20 GSAEQCGRQAGDALCPGGLCCSFYGWCGTTVDYCGDGCQSQCDG---GDGCDGGGGGGGDGDDGYLSDIIPKSTFDALLKFRNDPRCHAVGFYTYDAFISAAKEF 121
BLAST of FC920511 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 53/96 (55.21%), Postives = 68/96 (70.83%), Query Frame = 3 Query: 378 LGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDY 665 +G I++ ++F+ +L+ RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG +P G YA GYCF RE + Y Sbjct: 26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNGY 120 The following BLAST results are available for this feature:
BLAST of FC920511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920511 ID=FC920511; Name=FC920511; organism=Citrus clementina; type=EST; length=703bpback to top |