FC920520

Overview
NameFC920520
Unique NameFC920520
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length752
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:30..780. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.254e-35
Identity = 81/195 (41.54%), Postives = 117/195 (60.00%), Query Frame = 2
Query:  170 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKIYP 739
            S++ + D  + A +  W   H + Y  + E+E R  ++++N + ID HN E       +++ +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I DNG +D+E+ YP
Sbjct:   16 SAAPKLDPNLDAHWHQWKATHRRLYG-MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYP 203          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.236e-34
Identity = 86/210 (40.95%), Postives = 121/210 (57.62%), Query Frame = 2
Query:  122 ALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKIYPTK 745
            A ++++ S++K H                F++W+V+H K Y+ L E   R ++F  N R I+ HN+ N T+K+GLN+F+D++ +E R  +L +          S     YL   G   P S+DWRKKG  V+ VK+QGSCGSCW FST  A+E    I TG ++SL+EQ+LVDC  ++ N GC GGL   AFE+I  N GI  E  YP K
Sbjct:   22 ASNLAVSSFEKLH----------------FKSWMVQHQKKYS-LEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSE-----PQNCSATKGNYLRGTGP-YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYK 208          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.698e-34
Identity = 79/188 (42.02%), Postives = 108/188 (57.45%), Query Frame = 2
Query:  188 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKIYP 739
            ++ +   +E W   HGK YN+  ++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G R    R+         Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC  S N GC GG M  AF+++  NGGID+E  YP
Sbjct:   19 EETLDTQWELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVPPSRSF---SNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC-VSENYGCGGGYMTTAFQYVQQNGGIDSEDAYP 202          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.136e-34
Identity = 81/183 (44.26%), Postives = 109/183 (59.56%), Query Frame = 2
Query:  209 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKIYP 739
            +E W   H K YN+  ++  R  I+++NL++I  HN E      TY++ +N   D+TNEE      G +  A  +     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E  YP
Sbjct:   26 WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYP 202          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.136e-34
Identity = 81/183 (44.26%), Postives = 109/183 (59.56%), Query Frame = 2
Query:  209 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKIYP 739
            +E W   H K YN+  ++  R  I+++NL++I  HN E      TY++ +N   D+TNEE      G +  A  +     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E  YP
Sbjct:   26 WELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYP 202          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 8.014e-34
Identity = 81/183 (44.26%), Postives = 110/183 (60.11%), Query Frame = 2
Query:  209 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKIYP 739
            +E W   + K YN+ G++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G +  A R+     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E  YP
Sbjct:   26 WELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASRS-----RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYP 202          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.047e-33
Identity = 79/184 (42.93%), Postives = 115/184 (62.50%), Query Frame = 2
Query:  203 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHL-GARF--GAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEKIYP 739
            A+FE +   +G+AY  L E+++R   F+ NL  + EH + N   + G+ +F DL+  E+ + +L GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV CD   N+GC+GGLM  AF++++   NG + TE  YP
Sbjct:   36 ALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYP 215          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.047e-33
Identity = 79/184 (42.93%), Postives = 115/184 (62.50%), Query Frame = 2
Query:  203 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHL-GARF--GAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEKIYP 739
            A+FE +   +G+AY  L E+++R   F+ NL  + EH + N   + G+ +F DL+  E+ + +L GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV CD   N+GC+GGLM  AF++++   NG + TE  YP
Sbjct:   36 ALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYP 215          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.367e-33
Identity = 82/190 (43.16%), Postives = 118/190 (62.11%), Query Frame = 2
Query:  185 TDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKIYP 739
            +D E+ A F+     H + Y +L E++ RF IF++ LR I EHN +      TY + +N+F+D+T+EE+R M +  +  A R +L+          VG A P+S+DWR KG V  V++QG CGSCWA ST AA+E  + I +GS + LS Q+LVDC TSY N GCNGG     FE++ DN G++++  YP
Sbjct:   18 SDQELWADFKK---THARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEFRDMLM--KNEASRPNLEGLEVADLT--VGAA-PESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYVKDN-GLESDADYP 198          
BLAST of FC920520 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.045e-33
Identity = 78/181 (43.09%), Postives = 104/181 (57.46%), Query Frame = 2
Query:  209 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKIYP 739
            +E W   H K YN+  ++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G R    R+         Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC T  N GC GG M  AF+++  NGGID+E  YP
Sbjct:   26 WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSRSY---SNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE-NYGCGGGYMTTAFQYVQQNGGIDSEDAYP 202          
The following BLAST results are available for this feature:
BLAST of FC920520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATL2_BOVIN3.254e-3541.54Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATH_PIG1.236e-3440.95Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATK_RAT4.698e-3442.02Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_MACMU6.136e-3444.26Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA6.136e-3444.26Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_BOVIN8.014e-3444.26Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
LMCPB_LEIME1.047e-3342.93Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI1.047e-3342.93Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CATLL_PHACE1.367e-3343.16Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATK_MOUSE3.045e-3343.09Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC32009E03EF RVDevelop1 Citrus clementina cDNA clone C32009E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920520 ID=FC920520; Name=FC920520; organism=Citrus clementina; type=EST; length=752bp
CCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAAGTTCTTTT
CTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGTTTTTACTT
TTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCTTATGA
TAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTA
TGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAACGCT
TTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTAGGTT
TATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACC
GGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGGTGCA
CGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCGTTA
TCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGA
AAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGG
GCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGG
TAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCAT
ATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATT
ATTGATAATGGAGGTATTGACACAGAGAAGATTTACCCTACAAAAGCATG
AT
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