FC920521

Overview
NameFC920521
Unique NameFC920521
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 3.857e-74
Identity = 118/173 (68.21%), Postives = 146/173 (84.39%), Query Frame = 3
Query:   78 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 596
            A++ +G A + AIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAE+ +
Sbjct:   16 AKKLEGDAKIWAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDILVAEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNK 188          

HSP 2 Score: 49.6766 bits (117), Expect = 3.857e-74
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 2
Query:  590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715
            +KG RVLVVC+EIT   FRGP+    D+L+   LFGDGAAA+
Sbjct:  187 NKGGRVLVVCAEITINIFRGPSLEQDDNLLAQCLFGDGAAAM 228          
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: CHSA_IPOCO (Chalcone synthase A (Fragment) OS=Ipomoea cordatotriloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.857e-74
Identity = 121/173 (69.94%), Postives = 145/173 (83.82%), Query Frame = 3
Query:   78 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 596
            A+R +G A +LAIGTATP + V+QA YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ LTEE+LKENPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRL K LAEN +
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTEELLKENPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKGLAENNK 186          

HSP 2 Score: 48.521 bits (114), Expect = 3.857e-74
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 2
Query:  590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715
            +KGARVLVVCS IT   FRGP+    D+L+   LFGDG+AA+
Sbjct:  185 NKGARVLVVCSGITINIFRGPSLEQDDNLLAQCLFGDGSAAM 226          
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 6.560e-74
Identity = 122/177 (68.93%), Postives = 147/177 (83.05%), Query Frame = 3
Query:   72 RNAQR--ADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 596
            R A+R   +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR+M LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIK WG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAEN +
Sbjct:   14 RRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSNIRKRHMVLTEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKVWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAENNK 190          

HSP 2 Score: 50.447 bits (119), Expect = 6.560e-74
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 2
Query:  590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715
            +KGARVLVVCSE+    FRGP+    D+L+   LFGDG+AA+
Sbjct:  189 NKGARVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGSAAI 230          
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 1.898e-73
Identity = 118/175 (67.43%), Postives = 144/175 (82.29%), Query Frame = 3
Query:   72 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 596
            R  +R DG A +LAIGTA PA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCT+SGVDMPGAD+QL KL+GL  SV R MMYQQGC AG  +LRLAKDLAEN +
Sbjct:   14 RREKRFDGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEYKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQLAKLLGLSSSVNRLMMYQQGCNAGAVMLRLAKDLAENNK 188          

HSP 2 Score: 49.2914 bits (116), Expect = 1.898e-73
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 2
Query:  590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715
            +KG RVLVVCSE+    FRGP+    D+L+   LFGDG+AAV
Sbjct:  187 NKGGRVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGSAAV 228          
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTR (Chalcone synthase A (Fragment) OS=Ipomoea triloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 7.161e-73
Identity = 118/173 (68.21%), Postives = 144/173 (83.24%), Query Frame = 3
Query:   78 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 596
            A+R +G A +LAIGTATP + V+QA YPD+YFRIT SE + E KEKF+R+C+KS I+ R++ LTEE+LK++PN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRL KDLAEN +
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSERLLEHKEKFRRICNKSKIRFRHLVLTEELLKKSPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKDLAENNK 186          

HSP 2 Score: 51.2174 bits (121), Expect = 7.161e-73
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 2
Query:  590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715
            +KGARVLVVCSEIT   FRGP+    D+L+   LFGDG+AA+
Sbjct:  185 NKGARVLVVCSEITINIFRGPSLEQDDNLLAQCLFGDGSAAM 226          
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.589e-72
Identity = 117/175 (66.86%), Postives = 144/175 (82.29%), Query Frame = 3
Query:   72 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 596
            R  +R +G A +LAIGTA PA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCT+SGVDMPGAD+QL KL+GL  SV R MMYQQGC AG  +LRLAKDLAEN +
Sbjct:   11 RREKRIEGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNEASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQLAKLLGLSSSVNRLMMYQQGCNAGAAMLRLAKDLAENNK 185          

HSP 2 Score: 47.7506 bits (112), Expect = 1.589e-72
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 2
Query:  590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715
            +KG RVLVVCSE+    FRGP+    D L+   LFGDG+AAV
Sbjct:  184 NKGGRVLVVCSEVMLNVFRGPSLEQEDYLLAQCLFGDGSAAV 225          
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.523e-72
Identity = 118/177 (66.67%), Postives = 148/177 (83.62%), Query Frame = 3
Query:   72 RNAQR--ADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 596
            R A+R   +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+L++NP++C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD++LTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAE+ +
Sbjct:   14 RRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLQKNPSLCTYNETSLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFRLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNK 190          

HSP 2 Score: 49.2914 bits (116), Expect = 3.523e-72
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 2
Query:  590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715
            +KG R+LVVCSEIT   FRGP+    D+L+   LFGDG+AA+
Sbjct:  189 NKGGRILVVCSEITINIFRGPSLEQDDNLLAQCLFGDGSAAM 230          
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: VPS_PSINU (Phloroisovalerophenone synthase OS=Psilotum nudum GN=VPS PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.018e-71
Identity = 111/175 (63.43%), Postives = 139/175 (79.43%), Query Frame = 3
Query:   72 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 596
            R  +RA GP +VLAIG+A P +  +Q+ +PD+YF IT+S HM E+K KF RMC KS IKKR M++ E+IL+ +P++ +Y   SLD RQD++V EVPKLGK AA  AI EWGQPKS ITHLIFCT+SG+DMPGAD+ L KL+GLRP+V R M+YQQGCFAG TVLR+AKDLAEN +
Sbjct:   15 RKKERASGPVSVLAIGSANPPNVFHQSLFPDFYFNITQSNHMAEVKAKFTRMCAKSGIKKRRMHINEDILEAHPSIRSYHDNSLDVRQDMLVEEVPKLGKVAADNAIAEWGQPKSNITHLIFCTSSGIDMPGADWALMKLLGLRPTVNRVMVYQQGCFAGCTVLRIAKDLAENNK 189          

HSP 2 Score: 61.6178 bits (148), Expect = 1.018e-71
Identity = 26/42 (61.90%), Postives = 36/42 (85.71%), Query Frame = 2
Query:  590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715
            +KG+R+LVVCSE+T ++FRGP + H ++LVG  LFGDGAAA+
Sbjct:  188 NKGSRILVVCSELTLISFRGPTEDHPENLVGQALFGDGAAAL 229          
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: BBS_PHASS (Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 5.012e-71
Identity = 106/182 (58.24%), Postives = 146/182 (80.22%), Query Frame = 3
Query:   51 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 596
            M +++ I+ A RADG A++LAIG A P + + Q+ YPD+YFR+T SEH+ +LK+KF+R+C+K+ I+KR+    EE L  NP    +M  SL+ RQ++ + E+PKLG +AATKAI++WGQPKS+ITHLIFCTTSG+D+PGADYQLT+++GL P+V+R M+YQQGCFAGGT LRLAK LAE+ +
Sbjct:    1 MLSLESIKKAPRADGFASILAIGRANPDNIIEQSAYPDFYFRVTNSEHLVDLKKKFQRICEKTAIRKRHFVWNEEFLTANPCFSTFMDKSLNVRQEVAISEIPKLGAKAATKAIEDWGQPKSRITHLIFCTTSGMDLPGADYQLTQILGLNPNVERVMLYQQGCFAGGTTLRLAKCLAESRK 182          

HSP 2 Score: 54.6842 bits (130), Expect = 5.012e-71
Identity = 26/41 (63.41%), Postives = 30/41 (73.17%), Query Frame = 2
Query:  593 KGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715
            KGARVLVVC+E T V FR P++ H D LV   LF DGA+AV
Sbjct:  182 KGARVLVVCAETTTVLFRAPSEEHQDDLVTQALFADGASAV 222          
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: TBSYN_HYPAN (Trihydroxybenzophenone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 8.524e-71
Identity = 114/164 (69.51%), Postives = 132/164 (80.49%), Query Frame = 3
Query:   99 ATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 590
            A+VLAIGT  P H + Q DYPD+YFR T SEHMTELKEKFKR+C KS I+KR+ YLTEEILKEN  +  Y A SLDARQ I+  EVPKLG+EAA KAI EWGQP SKITH++F TTSG  MPGADY +T+L+GL  +V+R M+Y QGCFAGGT LR+AKDLAEN
Sbjct:   20 ASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRHFYLTEEILKENQGIATYGAGSLDARQRILETEVPKLGQEAALKAIAEWGQPISKITHVVFATTSGFMMPGADYVITRLLGLNRTVRRVMLYNQGCFAGGTALRVAKDLAEN 183          

HSP 2 Score: 56.225 bits (134), Expect = 8.524e-71
Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 2
Query:  590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715
            ++GARVLVVC+E TA+TF  P ++HLD +VG  +F DGAAA+
Sbjct:  184 NEGARVLVVCAENTAMTFHAPNESHLDVIVGQAMFSDGAAAL 225          
The following BLAST results are available for this feature:
BLAST of FC920521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSB_IPONI3.857e-7468.21Chalcone synthase B (Fragment) OS=Ipomoea nil GN=C... [more]
CHSA_IPOCO3.857e-7469.94Chalcone synthase A (Fragment) OS=Ipomoea cordatot... [more]
CHSB_IPOTF6.560e-7468.93Chalcone synthase B (Fragment) OS=Ipomoea trifida ... [more]
CHSC_IPOPU1.898e-7367.43Chalcone synthase C (Fragment) OS=Ipomoea purpurea... [more]
CHSA_IPOTR7.161e-7368.21Chalcone synthase A (Fragment) OS=Ipomoea triloba ... [more]
CHSA_IPONI1.589e-7266.86Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]
CHSB_IPOTR3.523e-7266.67Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
VPS_PSINU1.018e-7163.43Phloroisovalerophenone synthase OS=Psilotum nudum ... [more]
BBS_PHASS5.012e-7158.24Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 ... [more]
TBSYN_HYPAN8.524e-7169.51Trihydroxybenzophenone synthase OS=Hypericum andro... [more]

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Properties
Property NameValue
Genbank descriptionC32009E04EF RVDevelop1 Citrus clementina cDNA clone C32009E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920521 ID=FC920521; Name=FC920521; organism=Citrus clementina; type=EST; length=716bp
AACTCACCAAGCACGAGCCACCAACATATTCATTAAGGGTTCAACTTGAA
ATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCCGACGGCCCGGC
CACCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAGTGTCAACCAGG
CTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGAGCATATGACG
GAGCTTAAAGAGAAGTTCAAGCGCATGTGTGACAAGTCGATGATTAAGAA
GCGTTACATGTACTTAACGGAAGAGATTTTGAAGGAAAACCCCAACATGT
GCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACATTGTGGTGGTC
GAAGTGCCGAAGCTCGGGAAAGAAGCTGCTACAAAGGCCATCAAAGAATG
GGGCCAGCCCAAGTCTAAGATCACCCACCTCATCTTCTGCACCACCTCCG
GCGTCGACATGCCCGGCGCCGACTACCAGCTCACCAAACTGATCGGCCTG
CGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATGTTTCGCCGG
CGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACACAAGGGCGC
TCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCAGTCACTTTCCGCGGCC
CTGCCGATACTCATCTTGATTCTCTTGTGGGCCCAGGCTTGTTCGGTGAT
GGTGCTGCTGCTGTGA
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