FC920521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: THS2_ARAHY (Putative stilbene synthase 2 (Fragment) OS=Arachis hypogaea PE=5 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 4.079e-58 Identity = 85/106 (80.19%), Postives = 96/106 (90.57%), Query Frame = 3 Query: 279 LKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 596 LKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L L+GL PSVKR+MMY QGCFAGGTVLRLAKDLAEN + Sbjct: 1 LKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNK 106 HSP 2 Score: 64.3142 bits (155), Expect = 4.079e-58 Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = 2 Query: 590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715 +K ARVL+VCSE TAVTFRGP++T +DSLVG LF DGAAA+ Sbjct: 105 NKDARVLIVCSENTAVTFRGPSETDMDSLVGQALFADGAAAI 146
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.218e-53 Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 3 Query: 363 LGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 596 LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAEN + Sbjct: 1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 78 HSP 2 Score: 77.0258 bits (188), Expect = 6.218e-53 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715 +KGARVLVVCSE+TAVTFRGP+DTHLDSLVG LFGDGAAA+ Sbjct: 77 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAAL 118
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: CHS7_MEDSA (Chalcone synthase (Fragment) OS=Medicago sativa GN=CHSII PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 3.037e-39 Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 3 Query: 420 ITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 596 ITHLI CTTS VDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAEN + Sbjct: 1 ITHLIVCTTS-VDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 58 HSP 2 Score: 77.0258 bits (188), Expect = 3.037e-39 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715 +KGARVLVVCSE+TAVTFRGP+DTHLDSLVG LFGDGAAA+ Sbjct: 57 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAAL 98
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: CHSY_MALDO (Chalcone synthase (Fragment) OS=Malus domestica GN=CHS PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.035e-23 Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 590 HKGARVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAAV 715 +KGARVLVVCSEITAVTFRGP+DTHLDSLVG LFGDGAAAV Sbjct: 24 NKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAV 65 HSP 2 Score: 51.6026 bits (122), Expect = 2.035e-23 Identity = 23/25 (92.00%), Postives = 24/25 (96.00%), Query Frame = 3 Query: 522 MMYQQGCFAGGTVLRLAKDLAENTR 596 MMYQQGCFAGGTVLRLAKDLAEN + Sbjct: 1 MMYQQGCFAGGTVLRLAKDLAENNK 25
BLAST of FC920521 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.458e-18 Identity = 58/199 (29.15%), Postives = 98/199 (49.25%), Query Frame = 3 Query: 18 PPTYSLRV-QLEMATVQEIRNAQ--------RADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 587 PP S++ Q + VQ I+ Q +++ + VL IG + P ++Q D + E EK KR+ ++S IK R++ + + EN ++ D V VP L ++A +A+K+WG K ITH++ T++G+ +P +++L L+GL V+R + GC AG + LR A LA+ Sbjct: 2751 PPIQSVQQHQKQQQKVQVIQQQQQPLSRLSYKSNNNSFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKTRHL-VRDYTKPENSIKFRHLETITDVNNQFKKV-VPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAK 2945 HSP 2 Score: 28.8758 bits (63), Expect = 3.458e-18 Identity = 14/37 (37.84%), Postives = 22/37 (59.46%), Query Frame = 2 Query: 602 RVLVVCSEITAVTFRGPADTHLDSLVGPGLFGDGAAA 712 R+LVVC+E+ ++ F D +V +F DG+AA Sbjct: 2951 RILVVCTEVCSLHFSNTDGG--DQMVASSIFADGSAA 2985 The following BLAST results are available for this feature:
BLAST of FC920521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920521 ID=FC920521; Name=FC920521; organism=Citrus clementina; type=EST; length=716bpback to top |