FC920529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_SYNY3 (NADP-specific glutamate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=gdhA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.354e-44 Identity = 92/200 (46.00%), Postives = 123/200 (61.50%), Query Frame = 3 Query: 141 AATSRNFRNAARILGLDSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGH-SPAVVTGKPIDLGGSLGREAATGRGVVYATELYLLNMDRH 737 A S+ A + + + L P + V + DDGSL + G+RV++DD RGP KGG+RYHP V DEV +LA MT+K A+ ++P+GGAKGGI +PKELS +ELERL+R + + I D IG DI APD+ TN M W++D+YS SPAVVTGKP+ +GGS GR ATG G Y + L D++ Sbjct: 7 ADASKRLEKALKYVAISDDAGERLKYPKTSLSVSIPVRMDDGSLKIFPGYRVRYDDTRGPGKGGVRYHPNVTMDEVQSLAFWMTFKCALLNLPFGGAKGGITLNPKELSRAELERLSRGYIEAIADFIGPDIDILAPDVYTNEMMMGWMMDQYSIIRRKISPAVVTGKPVTMGGSQGRNTATGTGAFYIMQGMLPKFDQY 206
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE3_PYRFU (Glutamate dehydrogenase OS=Pyrococcus furiosus GN=gdhA PE=1 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.425e-43 Identity = 92/186 (49.46%), Postives = 120/186 (64.52%), Query Frame = 3 Query: 153 RNFRNAARILGLDSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGREAATGRGVVY 701 + AA+ + + + L P R ++V + DDGS+ + GFRVQH+ ARGP KGGIR+HPE V ALA MTWKTAV D+PYGG KGGI PK+LS+ E ERL R + + I+D+I + DIPAPD+ TN Q MAW++DEY +PA ++TGKP+ +GGSLGR AT RG Y Sbjct: 12 KQLERAAQYMEISEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYDVISPYEDIPAPDVYTNPQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARGASY 197
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE3_THELI (Glutamate dehydrogenase OS=Thermococcus litoralis GN=gdhA PE=1 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 3.174e-43 Identity = 90/186 (48.39%), Postives = 120/186 (64.52%), Query Frame = 3 Query: 153 RNFRNAARILGLDSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEY---SKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVY 701 + AA+ + + + L P R ++V + DDGS+ + GFRVQ++ ARGP KGGIR+HPE V ALA MTWKTAV D+PYGG KGG+ C+PKE+S+ E ERL R + + I+D+I +TDIPAPD+ TN Q MAW++DEY S+ S V+TGKP +GG + R AT RG Y Sbjct: 12 KQLERAAQYMDISEEALEFLKRPQRIVEVSIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGVICNPKEMSDREKERLARGYVRAIYDVISPYTDIPAPDVYTNPQIMAWMMDEYETISRRKDPSFGVITGKPPSVGGIVARMDATARGASY 197
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE3_PYRAB (Glutamate dehydrogenase OS=Pyrococcus abyssi GN=gdhA PE=3 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 3.174e-43 Identity = 91/186 (48.92%), Postives = 120/186 (64.52%), Query Frame = 3 Query: 153 RNFRNAARILGLDSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGREAATGRGVVY 701 + AA+ + + + L P R ++V + DDGS+ + GFRVQ++ ARGP KGGIR+HPE V ALA MTWKTAV D+PYGG KGGI PK+LS+ E ERL R + + I+D+I + DIPAPD+ TN Q MAW++DEY +PA ++TGKP+ +GGSLGR AT RG Y Sbjct: 12 KQLERAAQYMKISEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYDVISPYEDIPAPDVYTNPQIMAWMMDEYETIARRKTPAFGIITGKPLSIGGSLGRNEATARGASY 197
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE3_AERPE (Glutamate dehydrogenase OS=Aeropyrum pernix GN=gdhA PE=3 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 3.174e-43 Identity = 87/185 (47.03%), Postives = 122/185 (65.95%), Query Frame = 3 Query: 162 RNAARILGLDSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKF-HGHSPAVVTGKPIDLGGSLGREAATGRGVVYATEL 713 R A +LG D + L P R ++V TI DDG++ +++G+R QH+ A GP KGG+RYHP V +EV AL+ MTWK ++A +PYGG KGG+ +PK LS ELE L+R + + I D++G+ DIPAPD+ T+ Q M+W LDEY++ G VVTGKP++LGG R +TG GV +T + Sbjct: 15 RRAVDLLGYDDYVYEVLANPDRVLQVRVTIKMDDGTVKTFLGWRSQHNSALGPYKGGVRYHPNVTMNEVIALSMWMTWKNSLAGLPYGGGKGGVRVNPKILSPRELELLSRKYFESISDIVGVDQDIPAPDVYTDPQVMSWFLDEYNRVKRGQFFGVVTGKPVELGGLNARIVSTGYGVAVSTRV 199
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE3_PYRHO (Glutamate dehydrogenase OS=Pyrococcus horikoshii GN=gdhA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.415e-43 Identity = 90/186 (48.39%), Postives = 120/186 (64.52%), Query Frame = 3 Query: 153 RNFRNAARILGLDSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGREAATGRGVVY 701 + AA+ + + + L P R ++V + DDGS+ + GFRVQ++ ARGP KGGIR+HPE V ALA MTWKTAV D+PYGG KGGI PK+LS+ E ERL R + + ++D+I + DIPAPD+ TN Q MAW++DEY +PA ++TGKP+ +GGSLGR AT RG Y Sbjct: 12 KQLERAAQHMKISEEALEFLKRPQRIVEVTIPVEMDDGSVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAVYDIISPYEDIPAPDVYTNPQIMAWMMDEYETIARRKTPAFGIITGKPLSIGGSLGRNEATARGASY 197
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE3_PYREN (Glutamate dehydrogenase OS=Pyrococcus endeavori GN=gdhA PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.072e-43 Identity = 90/186 (48.39%), Postives = 120/186 (64.52%), Query Frame = 3 Query: 153 RNFRNAARILGLDSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGREAATGRGVVY 701 + AA+ + + + L P R ++V + DDG++ + GFRVQ++ ARGP KGGIR+HPE V ALA MTWKTAV D+PYGG KGGI PK+LS+ E ERL R + + I+D+I + DIPAPD+ TN Q MAW++DEY +PA ++TGKP+ +GGSLGR AT RG Y Sbjct: 12 KQLERAAQYMKISEEALEFLKRPQRIVEVTIPVEMDDGTVKVFTGFRVQYNWARGPTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYDVISPYEDIPAPDVYTNPQIMAWMMDEYEAISRRKTPAFGIITGKPLSIGGSLGRNEATARGASY 197
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE2_SULSO (Glutamate dehydrogenase 2 OS=Sulfolobus solfataricus GN=gdhA-2 PE=1 SV=3) HSP 1 Score: 172.94 bits (437), Expect = 1.575e-42 Identity = 87/174 (50.00%), Postives = 118/174 (67.82%), Query Frame = 3 Query: 177 ILGLDSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSP-AVVTGKPIDLGGSLGREAATGRGV 695 +LGLD++ +L P R I+V+ I DG L +++G+R QH+ A GP KGG+RYHP V DEV AL+ +MTWK ++ +PYGG KGG+ PK+L+ ELE+L+R + Q I+ +G DIPAPD+ T++QTMAW LDEY K G AV TGKP++LGG R +TG GV Sbjct: 24 LLGLDNETLETLSQPERIIQVKIQIRGSDGKLKTFMGWRSQHNSALGPYKGGVRYHPNVTQDEVEALSMIMTWKNSLLLLPYGGGKGGVRVDPKKLTREELEQLSRKYIQAIYKYLGSELDIPAPDVNTDSQTMAWFLDEYIKITGKVDFAVFTGKPVELGGIGVRLYSTGLGV 197
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: GUDB_BACSU (NAD-specific glutamate dehydrogenase OS=Bacillus subtilis GN=gudB PE=1 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 2.687e-42 Identity = 86/193 (44.56%), Postives = 122/193 (63.21%), Query Frame = 3 Query: 129 MNALAATSRNFRNAARILGLDSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTW---KTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKF-HGHSPAVVTGKPIDLGGSLGREAATGRGV 695 ++ L +T A LG ++ L P R + V+ + DDGS+ + G+R QH+D+ GP KGGIR+HP V EV A+ L W K + D+PYGG KGGI C P+++S ELERL+R + + I ++G D+PAPD+ TN+Q MAW++DEYS+ +SP +TGKP+ LGGS GRE+AT +GV Sbjct: 15 LDVLKSTQTVIHKALEKLGYPEEVYELLKEPMRLLTVKIPVRMDDGSVKIFTGYRAQHNDSVGPTKGGIRFHPNVTEKEVKAVKALSIWMSLKCGIIDLPYGGGKGGIVCDPRDMSFRELERLSRGYVRAISQIVGPTKDVPAPDVFTNSQIMAWMMDEYSRIDEFNSPGFITGKPLVLGGSHGRESATAKGV 207
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE3_PYRKO (Glutamate dehydrogenase OS=Pyrococcus kodakaraensis GN=gdhA PE=1 SV=4) HSP 1 Score: 167.162 bits (422), Expect = 8.645e-41 Identity = 86/186 (46.24%), Postives = 115/186 (61.83%), Query Frame = 3 Query: 153 RNFRNAARILGLDSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYS---KFHGHSPAVVTGKPIDLGGSLGREAATGRGVVY 701 + AA+ + + + L P R ++V + DDGS+ + GFRVQH+ ARGP KGGIR+HP V ALA MTWK AV D+PYGG KGGI PK+LS E ERL R + + ++D+IG TDIPAPD+ TN + MAW++DEY + G + V+TGKP +GG + R AT RG + Sbjct: 12 QQLERAAQFMDISEEALEWLKRPMRIVEVSVPVEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPAETLSTVKALATWMTWKVAVVDLPYGGGKGGIIVDPKKLSEREQERLARSYIRAVYDVIGPWTDIPAPDVYTNPKIMAWMMDEYETIMRRKGPAFGVITGKPPGVGGIVARMDATARGAAF 197 The following BLAST results are available for this feature:
BLAST of FC920529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920529 ID=FC920529; Name=FC920529; organism=Citrus clementina; type=EST; length=743bpback to top |