FC920529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE3_RHISN (Probable glutamate dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=NGR_a01340 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.649e-23 Identity = 60/154 (38.96%), Postives = 90/154 (58.44%), Query Frame = 3 Query: 264 GSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIG-IHTDIPAPDMGTNAQTMAWILDEYSKFHG----HSPAVVTGKPIDLGGSLGREAATGRGVVYATE 710 G + S++G+R + P+KG IRY D +EV ALA LMT K ++ D+P+GG+KG + P+ + ELE +TR FTQ+++ D+GT + MAW++DE+ + + S A VTGKP+ GG GR +TGRGV +A + Sbjct: 31 GRMYSFIGWRSVREHCE-PVKGDIRYASNADAEEVEALAALMTLKCSLVDVPFGGSKGALKIDPRGWTPQELEHITRRFTQEMNKRPDRARRQCVGSDIGTGEREMAWMMDEFRRANPTDVVTSGACVTGKPLSKGGIAGRAESTGRGVQFAIQ 183
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_EMENI (NADP-specific glutamate dehydrogenase OS=Emericella nidulans GN=gdhA PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.224e-23 Identity = 60/165 (36.36%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 216 IPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVYATE 710 +P R I+ D G + G+RVQ + A GP KGG+R+HP V+ + L +K A+ + GG KGG PK S+SE+ R F ++ IG TD+PA D+G + + ++ +Y + V+TGK GGSL R ATG GVVY E Sbjct: 42 VPERVIQFRVVWENDKGEVQINRGYRVQFNSALGPYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLNMGGGKGGSDFDPKGKSDSEIRRFCTAFMTELCKHIGADTDVPAGDIGVTGREVGFLFGQYRRIRNQWEGVLTGKGGSWGGSLIRPEATGYGVVYYVE 206
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_HEBCY (NADP-specific glutamate dehydrogenase OS=Hebeloma cylindrosporum PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.129e-23 Identity = 59/165 (35.76%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 216 IPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVYATE 710 +P R ++ D G GFRVQ++ A GP KGG+R HP V+ + L T+K A+ + GG KGG PK S+SE+ R F ++ IG TD+PA D+GT + + ++ Y K ++TGK + GGS R ATG G++Y E Sbjct: 39 VPERVLQFRVVWEDDQGVAQVNHGFRVQYNSALGPYKGGLRLHPSVNLSILKFLGFEQTFKNALTGLSMGGGKGGSDFDPKGKSDSEIRRFCFSFMGELFRHIGSDTDVPAGDIGTGGREIGFLFGAYKKLRNEFTGMLTGKGLTWGGSFIRPEATGYGLIYFVE 203
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_HELPY (NADP-specific glutamate dehydrogenase OS=Helicobacter pylori GN=gdhA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.062e-22 Identity = 62/171 (36.26%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 198 LERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVYATE 710 LER L+ P REI D+ + G RV+ + A GP KGG+R+HP V+ + L K ++ + GGAKGG PK S E+ R + F +++ IG TD+PA D+G + + ++ +Y K V+TGK + GGSL R+ ATG G VY E Sbjct: 47 LER-LIEPEREIFFRVCWLDDNNQIQVNRGCRVEFNSAIGPYKGGLRFHPSVNESVIKFLGFEQVLKNSLTTLAMGGAKGGSDFDPKGKSEHEIMRFCQAFMNELYRHIGATTDVPAGDIGVGEREIGYLFGQYKKLVNRFEGVLTGKGLTYGGSLCRKEATGYGCVYFAE 216
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_GIALA (NADP-specific glutamate dehydrogenase OS=Giardia lamblia PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.062e-22 Identity = 59/167 (35.33%), Postives = 87/167 (52.10%), Query Frame = 3 Query: 210 LLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVYATE 710 +L P R I D G + GFRVQ++ A GP KGG+R+HP V+ + L K ++ +P GG KGG PK S++E+ R + F ++ +G TD+PA D+G A+ + ++ +Y + V+TGK + GGS R ATG G VY E Sbjct: 51 MLEPERVIIFRVPWMDDAGRINVNRGFRVQYNSALGPYKGGLRFHPSVNLSILKFLGFEQILKNSLTTLPMGGGKGGSDFDPKGKSDNEVMRFCQSFMTELQRHVGADTDVPAGDIGVGAREIGYLYGQYKRLRNEFTGVLTGKNVKWGGSFIRPEATGYGAVYFLE 217
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_CORGL (NADP-specific glutamate dehydrogenase OS=Corynebacterium glutamicum GN=gdh PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.062e-22 Identity = 62/172 (36.05%), Postives = 90/172 (52.33%), Query Frame = 3 Query: 189 DSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKF-HGHSPAVVTGKPIDLGGSLGREAATGRGVVY 701 D L + L P R++ D G + GFRVQ + A GP KGG+R+HP V+ V L +K ++ +P GG KGG PK S+ E+ R + F ++H IG + D+PA D+G + + ++ Y + + H V+TGK + GGSL R ATG G VY Sbjct: 47 DYGLIQRLCEPERQLIFRVPWVDDQGQVHVNRGFRVQFNSALGPYKGGLRFHPSVNLGIVKFLGFEQIFKNSLTGLPIGGGKGGSDFDPKGKSDLEIMRFCQSFMTELHRHIGEYRDVPAGDIGVGGREIGYLFGHYRRMANQHESGVLTGKGLTWGGSLVRTEATGYGCVY 218
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_COREF (NADP-specific glutamate dehydrogenase OS=Corynebacterium efficiens GN=gdh PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.062e-22 Identity = 62/172 (36.05%), Postives = 90/172 (52.33%), Query Frame = 3 Query: 189 DSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKF-HGHSPAVVTGKPIDLGGSLGREAATGRGVVY 701 D L + L P R++ D+G + GFRVQ + A GP KGG+R+HP V+ V L +K ++ +P GG KGG PK S E+ R + F ++H IG + D+PA D+G + + ++ Y + + H V+TGK + GGSL R ATG G VY Sbjct: 47 DYGLIQRLCEPERQLIFRVPWVDDNGQVHVNRGFRVQFNSALGPYKGGLRFHPSVNLGIVKFLGFEQIFKNSLTGLPIGGGKGGSDFDPKGKSELEIMRFCQSFMTELHRHIGEYRDVPAGDIGVGGREIGYLFGHYRRLANQHESGVLTGKGLTWGGSLVRTEATGFGTVY 218
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_HAEIN (NADP-specific glutamate dehydrogenase OS=Haemophilus influenzae GN=gdhA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.811e-22 Identity = 60/177 (33.90%), Postives = 92/177 (51.98%), Query Frame = 3 Query: 189 DSKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVYATELYL 719 ++ LER L+ P R + D G + FRVQ + A GP KGG+R+HP V+ + L +K A+ +P GGAKGG PK S++E+ R + +++ +G TD+PA D+G + + ++ K S V TG+ + GGSL R ATG G++Y + L Sbjct: 48 EALLER-LVEPERAFQFRVAWTDDKGQVQVNRAFRVQFNSAIGPFKGGMRFHPSVNLSILKFLGFEQIFKNALTTLPMGGAKGGSDFDPKGKSDAEVMRFCQALMAELYRHVGADTDVPAGDIGVGGREVGYLAGYMKKLSNQSACVFTGRGLSFGGSLIRPEATGYGLIYFAQAML 223
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_SALTY (NADP-specific glutamate dehydrogenase OS=Salmonella typhimurium GN=gdhA PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 4.034e-22 Identity = 64/176 (36.36%), Postives = 91/176 (51.70%), Query Frame = 3 Query: 192 SKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVYATELYL 719 S LER L+ P R I+ D + +RVQ + A GP KGG+R+HP V+ + L T+K A+ +P GG KGG PK S E+ R + +++ +G TD+PA D+G + + ++ K +S V TGK + GGSL R ATG G+VY TE L Sbjct: 49 SLLER-LVEPERVIQFRVVWLDDKNQVQVNRAWRVQFNSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGPDTDVPAGDIGVGGREVGFMAGMMRKLSNNSSCVFTGKGLSFGGSLIRPEATGYGLVYFTEAML 223
BLAST of FC920529 vs. ExPASy Swiss-Prot
Match: DHE4_SALTI (NADP-specific glutamate dehydrogenase OS=Salmonella typhi GN=gdhA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.034e-22 Identity = 64/176 (36.36%), Postives = 91/176 (51.70%), Query Frame = 3 Query: 192 SKLERSLLIPFREIKVECTIPKDDGSLVSYVGFRVQHDDARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPKELSNSELERLTRVFTQKIHDLIGIHTDIPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVYATELYL 719 S LER L+ P R I+ D + +RVQ + A GP KGG+R+HP V+ + L T+K A+ +P GG KGG PK S E+ R + +++ +G TD+PA D+G + + ++ K +S V TGK + GGSL R ATG G+VY TE L Sbjct: 49 SLLER-LVEPERVIQFRVVWLDDKNQVQVNRAWRVQFNSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGPDTDVPAGDIGVGGREVGFMAGMMRKLSNNSACVFTGKGLSFGGSLIRPEATGYGLVYFTEAML 223 The following BLAST results are available for this feature:
BLAST of FC920529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920529 ID=FC920529; Name=FC920529; organism=Citrus clementina; type=EST; length=743bpback to top |