FC920531
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: 3HIDH_PONAB (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Pongo abelii GN=HIBADH PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16 Identity = 57/211 (27.01%), Postives = 105/211 (49.76%), Query Frame = 2 Query: 77 MASK--VGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHPWXLYDI 703 +ASK VGF+GL MA +L++ GY + +++ +F G +SP D + ++ ++ + + G G+LK ++KG+++I STI P+ ++L K + A +DA VS G+ +G G + A+ L M + ++ G +G G K+ N++L + +I + EA++LG++ G+ P L I Sbjct: 36 VASKTPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMG--AVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNV-VYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKI 243
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: 3HIDH_HUMAN (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=HIBADH PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16 Identity = 57/211 (27.01%), Postives = 105/211 (49.76%), Query Frame = 2 Query: 77 MASK--VGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHPWXLYDI 703 +ASK VGF+GL MA +L++ GY + +++ +F G +SP D + ++ ++ + + G G+LK ++KG+++I STI P+ ++L K + A +DA VS G+ +G G + A+ L M + ++ G +G G K+ N++L + +I + EA++LG++ G+ P L I Sbjct: 36 VASKTPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMG--AVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNV-VYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKI 243
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: MMSB_PSEAE (3-hydroxyisobutyrate dehydrogenase OS=Pseudomonas aeruginosa GN=mmsB PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15 Identity = 52/205 (25.37%), Postives = 101/205 (49.27%), Query Frame = 2 Query: 89 VGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHPWXLYDI 703 + F+GL MAA+L+++G++V F++ V G + S + + ++ ++ ++ ++ G +G+L + ++I STI P +K+ + T ++DA VS G+ G G + RARP L M + ++ G+ GAG K+ N++L G+ + + EA++LGV+ G+ P L ++ Sbjct: 4 IAFLGLGNMGGPMAANLLKAGHRVNVFDLQPKAVLGLVEQGAQGADSALQCCEGAEVVISMLPAGQHVESLYLGDDGLLARVAGKPLLIDCSTIAPETARKVAEAAAAKGLT--LLDAPVSGGVGGARAGTLSFIVGGPAEGFARARPVLENMGRNIF-HAGDHGAGQVAKICNNMLLGILMAGTAEALALGVKNGLDPAVLSEV 205
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: YIHU_SALTY (Uncharacterized oxidoreductase yihU OS=Salmonella typhimurium GN=yihU PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 49/201 (24.38%), Postives = 96/201 (47.76%), Query Frame = 2 Query: 89 VGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVND----LLEGVHLIASVEAISLGVQFGI 679 + F+GL + MA++L++ G+++ F+++ V + G ++SP A ++ ++ + D + + FG +GV + L + A++I STI P L + ++D + R G ++ G + +ERA P L AM L + G G G ++K++N+ L + A+V +LG+ F + Sbjct: 4 IAFIGLGQMGSPMASNLLKQGHQLSVFDVNPDAVQRLVDKGAQPASSPAQATIGAEFVITMLPNGDLVRSVLFGEQGVCETLSREALVIDMSTIHPLQTDNLIADM--QSKGFSMMDVPIGRTSDNAITGTLLLLAGGTAEQVERATPVLMAMGNEL-VNTGGPGMGIRVKLINNYMSIALNALSAEAAVLCEALGLSFDV 201
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: GARR_ECOLI (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) GN=garR PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 43/204 (21.08%), Postives = 101/204 (49.51%), Query Frame = 2 Query: 86 KVGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHPWXLY 697 KVGF+GL M+ +L+++GY + + + + G +++ + ++ ++ + + ++ G G+++G + G V+I S+I P +++ + + ++DA VS G + +G + G ++ + AM ++ + GE+GAG+ K+ N ++ +++ A EA++L + G++P +Y Sbjct: 2 KVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEAL--KAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSV-VHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVY 202
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: GARR_ECOL6 (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli O6 GN=garR PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 43/204 (21.08%), Postives = 101/204 (49.51%), Query Frame = 2 Query: 86 KVGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHPWXLY 697 KVGF+GL M+ +L+++GY + + + + G +++ + ++ ++ + + ++ G G+++G + G V+I S+I P +++ + + ++DA VS G + +G + G ++ + AM ++ + GE+GAG+ K+ N ++ +++ A EA++L + G++P +Y Sbjct: 2 KVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEAL--KAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSV-VHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVY 202
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: 3HIDH_CAEEL (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=B0250.5 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.127e-13 Identity = 52/200 (26.00%), Postives = 96/200 (48.00%), Query Frame = 2 Query: 83 SKVGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKF-MITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGI 679 S GF+GL MA +LI++G K+ ++++ +V +F G +A P D ++ V+ + ++ G G+ K +Q G + + STI + LE A +DA +S G++ + +G +RA LS M K + + G +G G+ K+ N++L G+ ++A E ++LG+ G+ Sbjct: 2 SLTGFIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVLPSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTI--DQIVSLEVAQAAALLKAEYIDAPISGGVTGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNI-VNLGAVGNGTAAKICNNMLLGIQMVAVAETMNLGISMGL 198
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: GLXR_ECOLI (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) GN=glxR PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13 Identity = 49/200 (24.50%), Postives = 88/200 (44.00%), Query Frame = 2 Query: 86 KVGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGIHP 685 K+GF+GL MA +L R+G+++ I P+ D+ LG + + + + +++ Q++++ FG G K KG I+ S+I P ++ + N+ +DA VS G G I G ER +P + K + + G G G K+ N ++ +++ A EA+ + G P Sbjct: 2 KLGFIGLGIMGTPMAINLARAGHQLHVTTIG-PVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQV--NELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGN-GDGQTCKVANQIIVALNIEAVSEALLFASKAGADP 197
BLAST of FC920531 vs. ExPASy Swiss-Prot
Match: 3HIDH_DROME (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Drosophila melanogaster GN=CG15093 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12 Identity = 52/200 (26.00%), Postives = 91/200 (45.50%), Query Frame = 2 Query: 80 ASKVGFVGLDEYSVDMAASLIRSGYKVQAFEISDPLVDKFFMLGGIRSASPMDAGKDVSALVVVISHVDQIDDIFFGHEGVLKGLQKGAVIILQSTILPSHMQKLEKTFTENDETACVVDAYVSRGMSEVFNGKFMITTSGRSNAIERARPFLSAMCKTLYIFEGELGAGSKIKMVNDLLEGVHLIASVEAISLGVQFGI 679 A +GFVGL +MA++LI++G+K+ F+IS P D G A + K+ ++ ++ + +D + E G+ K + I STI P ++ L+K + + A +DA VS G+ G + L M K + G G G K+ N+++ + +I EA++L V+ G+ Sbjct: 28 AKNIGFVGLGNMGANMASNLIKAGHKLHVFDISKPACDGLAAKGATVYAKTSELAKNSDFVITMLPNNAIVDASY--DEMTADGVNKDTIFIDSSTISPDLVKSLQKKISA--KGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKI-THCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQGL 222 The following BLAST results are available for this feature:
BLAST of FC920531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920531 ID=FC920531; Name=FC920531; organism=Citrus clementina; type=EST; length=703bpback to top |