FC920538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAA2 (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain JH1) GN=SaurJH1_0937 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19 Identity = 54/144 (37.50%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRES 673 +I I+ ++V V ++G +E ++ A +K++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+++GT F+ S++S A R++ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPNESIIERLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDA 257
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAW (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain MW2) GN=MW0803 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.740e-19 Identity = 54/144 (37.50%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 269 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRES 673 +I + ++V V ++G SE ++ A +K++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+++GT F+ S++S A R++ Sbjct: 117 HIDTTIKKQVPVCCFTFGIPSESIIKRLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDA 257
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_BACSU (Probable 2-nitropropane dioxygenase OS=Bacillus subtilis GN=yrpB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 71/246 (28.86%), Postives = 111/246 (45.12%), Query Frame = 2 Query: 71 IVQAPLGPDISGPEXXXXXXXXXXXXXXRAPDWEAPDYLRDLIRKTRSLTERPFGVGVV----LAFPHNENIK------------------------------AILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH------VIGQD--GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRESWLK 682 I+QAP+ I+ P A + PD L I++ LT+ PF + V L P + IK IL KV ++ E+ V E +AG ++ + +EA G+D +++QG EAGGH G+ GL++L+P D + +P+IAAGG++D RG AAL+LGAQG+++G+ F+ ES AHP +++ L+ Sbjct: 14 IIQAPMAGGITKPRLASAVSNQGALGSL-ASGYLTPDLLEQQIKEIFELTDAPFQINVFVPLGLEMPPKDQIKKWKENIPLANQVNQFTSVQEEWDDFYQKIDLILKYKVKACSFTFDLPPEDAVKELKTAGCCLIGTASTVEEALLMEERGMDIVVLQGSEAGGHRGAFLPSKGESAVGLMALIPQAADAL---SVPVIAAGGMIDHRGVKAALTLGAQGVQIGSAFLICHESNAHPVHKQKILE 255
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAHJ (Probable 2-nitropropane dioxygenase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2032 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.379e-16 Identity = 50/146 (34.25%), Postives = 87/146 (59.59%), Query Frame = 2 Query: 272 IKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH------VIGQD----GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRESWL 679 I+ ++ +V V ++G S+E++ + A + ++ + DEA +AG+D ++ QG EAGGH Q G +SL+P +VD + IP++AAGG++D RG +A+ LGAQG+++GT F+ +EES A+ +++ L Sbjct: 118 IQTVIKYRVPVCCFTFGIPSKEIIEQLKGAKITLIGTATTVDEAIANEHAGMDIVVAQGSEAGGHRGSFLTTNNQREPLIGTMSLIPQIVDHVS---IPVVAAGGVMDGRGILASQILGAQGVQMGTAFLTTEESGANQLVKQAVL 260
BLAST of FC920538 vs. ExPASy Swiss-Prot
Match: 2NPD_STAS1 (Probable 2-nitropropane dioxygenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1854 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16 Identity = 49/144 (34.03%), Postives = 84/144 (58.33%), Query Frame = 2 Query: 272 IKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH----------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIRLGTRFVASEESYAHPEYRES 673 I ++ + V + ++G + ++ + +K++ S +EA +AG+D +I QG EAGGH + G +SL+P +VD I +IP++AAGGI+D RG VA++ LGA+G+++GT F+ S+ES A Y+ + Sbjct: 118 IDLVIEKGVPAVSFTFGIPEQTVIEKLKERHIKLIGTATSVEEAIANESAGMDMVIAQGSEAGGHRGAFSETASQLTPLIGTMSLVPQMVDQI---NIPVVAAGGIMDGRGLVASMVLGAEGVQMGTAFLTSDESGASQLYKHA 258 The following BLAST results are available for this feature:
BLAST of FC920538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920538 ID=FC920538; Name=FC920538; organism=Citrus clementina; type=EST; length=709bpback to top |