FC920540

Overview
NameFC920540
Unique NameFC920540
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase yqkF OS=Bacillus subtilis GN=yqkF PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20
Identity = 64/186 (34.41%), Postives = 100/186 (53.76%), Query Frame = 2
Query:  149 KLGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKMLPREKVQIATKFGVVGLRDNGV---IVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITAVQMEWSLWTRDIEE 697
            KLGT  L++S++GLGCM+L +       +   +S++  A   GI + DTAD+Y +  NE ++G A +   R  + +ATK G     D+G        +  Y++   + SL RL  DYIDLY  H       I+ETI   ++L +EG I+Y G+S   P+ I+       I ++ M++SL+ R  EE
Sbjct:    5 KLGTSDLDISEVGLGCMSLGT------EKNKALSILDEAIELGINYLDTADLYDRGRNEEIVGDAIQNR-RHDIILATKAG--NRWDDGSEGWYWDPSKAYIKEAVKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYVKKSNIVSIMMQFSLFDRRPEE 181          
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18
Identity = 64/185 (34.59%), Postives = 103/185 (55.68%), Query Frame = 2
Query:  164 GLEVSKLGLGCMNLS-SGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN---ANETLLGKAFKMLPR--EKVQIATKFGVVGLRDNGVIVKGTPDYVRSCCEASLKRL-DVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITAVQMEWSLWTRDIEE 697
            G +V  +GLG M L+     +P+ +     ++ +A S+G  +++  + YG N   AN  LL   F+  P+  +KV ++ K G        +   G P+ V    + +L RL     +DL+   RVD  VPIE T+  +K  V+ G+I  +GLSEAS ++I+RA  + PI AV+ E+SL++RDIE+
Sbjct:    6 GFKVGPIGLGLMGLTWRPKQTPIKQ--AFELMNYALSQGSNYWNAGEFYGINPPTANLDLLADYFEKYPKNADKVFLSVKGGT---DFKTLAPHGDPESVTKSVKNALTRLRGKKKLDLFQCARVDHKVPIETTMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEK 185          
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18
Identity = 66/199 (33.17%), Postives = 103/199 (51.76%), Query Frame = 2
Query:  152 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHG-------VHPITAVQMEWSLWTR-DIEEEIIPL 712
            LG  GL VS+L  G       + + +  ++  ++++     G+ FFD A+VY     E ++G+A + L   R  V ++TK  +G  G  D G+  K   + +R     SLKRLD+DY+D+ Y HR D + P+EET+  M  +++ G   Y G SE S   I  A         V PI   Q E++L++R  +E E +PL
Sbjct:    6 LGRSGLRVSQLSYGAWVT---FGNQLDVKEAKALLQACRDAGVNFFDNAEVYANGRAEEIMGQAMRDLGWRRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLRG----SLKRLDMDYVDVVYCHRPDATTPVEETVRAMNWVIDHGMAFYWGTSEWSAQQITEAWSVANRLDLVGPIVE-QPEYNLFSRHKVESEFLPL 196          
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: KCAB_SCHPO (Putative voltage-gated potassium channel subunit beta OS=Schizosaccharomyces pombe GN=SPCC965.06 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.720e-17
Identity = 72/204 (35.29%), Postives = 106/204 (51.96%), Query Frame = 2
Query:  137 VPRVKLGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKML--PREKVQIATK--FGVVGLRDNGVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHG-------VHPITAVQMEWSLWTRD-IEEEIIPL 712
            VP   LG  GL+VS   LG   L+ G +     E   + +K A+  GI  FDTA++Y    +ET++GKA K L   R +  I TK  FG      N   +  +  ++     ASLKRL + Y+D+   HR D SVP+EE +    +L+++GK  Y G SE S   I  AH        + P+ A Q +++  TRD  E++++PL
Sbjct:   13 VPFRFLGRSGLKVSAFSLGGW-LTYG-NEGYDVEHTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVFFGAGTKLPNTTGL--SRKHIIEGLNASLKRLGLPYVDVIMAHRPDPSVPMEEVVRAFTQLIQDGKAFYWGTSEWSAFEIEHAHHIATKYNLIAPV-ADQPQYNYLTRDHFEKDLLPL 211          
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17
Identity = 67/201 (33.33%), Postives = 96/201 (47.76%), Query Frame = 2
Query:  152 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNAN----ETLLGKAFKM--LPREKVQIATKF--GVVGLRDNGVIVKGTPDY-VRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHG------VHPITAVQMEWSLWTRDIEEEIIP 709
            LG  GL VS+L LG MN    +     E+    ++  A   GI FFDTA++YG   N    E+++GK F      REKV +ATK    +    D    ++G   Y +R   E SLKRL  D+I+LY  H +D   P +E     +  V  GK+ YIG S  +   + +A           +   Q ++SL  R  E E++P
Sbjct:    6 LGRTGLRVSRLCLGTMN----FGVDTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTPWDEIWEAFETQVRSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMGLVTEQHKYSLLERTAEMEVLP 202          
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: NORA_ASPFL (Norsolorinic acid reductase OS=Aspergillus flavus GN=norA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.059e-16
Identity = 61/209 (29.19%), Postives = 100/209 (47.85%), Query Frame = 2
Query:  143 RVKLGTQGLEVSKLGLGCMNLSSGYSSPVSEED---GISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKMLP-REKVQIATK-------FGVVGLRDN--GVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP------DTIRRAHGVHPITAVQMEWSLWTRDIEEEIIPL 712
            R+   + G+ VS L LG M+  +G+   + E D     +M+   +  G  F D A+ Y     E  +G+       R+++ ++TK       FG   ++ N  G   K     +R   +ASL++L  DYIDL Y H  D +  +EE +  +  LV  GK+ Y+G+S+         +   RA+G+ P +  Q  WS   RD E +I+P+
Sbjct:   17 RILSSSAGVRVSPLCLGTMSFGNGWKGVMGECDQATSFNMLDTFYESGGNFIDVANFYQGGDTERWVGEWMAQRQNRDEIVLSTKYTMGYTMFGPQKIKSNYQGNHAKS----LRLSVKASLQKLQTDYIDLLYVHMWDFTTSVEEVMRSLNHLVANGKVLYLGVSDTPAWLVVKCNAFARANGLTPFSVYQGHWSCAFRDFERDILPM 221          
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: YI7E_SCHPO (Putative aryl-alcohol dehydrogenase C977.14c OS=Schizosaccharomyces pombe GN=SPAC977.14c PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.995e-16
Identity = 71/220 (32.27%), Postives = 99/220 (45.00%), Query Frame = 2
Query:  152 LGTQGLEVSKLGLGCMNLSSG--YSSPV--SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKM--LPREKVQIATK------------FGVVGLRDNGVIVKGTPDYVRSC----------CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHGVHPITAVQMEWSLWTRDIEEEIIP 709
            LG  GL+VSKL LGCM+      +   V   EE+   ++K A+  GI  FDTA+ Y    +E L+GK  +   +PR  + I +K            FG   L   GV    +P+    C           E S+KRL   YID+   HR D  V  EE +  +  +VE GK++YIG S                HG H   ++Q   +L  R+ E E+IP
Sbjct:   12 LGNSGLKVSKLILGCMSYGKKEYWEDWVLEDEEEVFKIMKAAYDAGIRTFDTANCYSAGVSEELVGKFIRKYEIPRSSIVILSKCFFPVRKDLIKIFG--DLSSRGVHFLDSPELANQCGLSRKHIFDAVEDSVKRLGT-YIDVLQIHRYDPHVSAEEVMRALNDVVESGKVRYIGASTMRCYQFIELQNTAEKHGWHKFISMQNYHNLLYREEEREMIP 228          
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: YEZB_SCHPO (Uncharacterized oxidoreductase C3A11.11c OS=Schizosaccharomyces pombe GN=SPAC3A11.11c PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.218e-16
Identity = 64/185 (34.59%), Postives = 98/185 (52.97%), Query Frame = 2
Query:  173 VSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQN---ANETLLGKAFKMLPR--EKVQIATKFGVVGLRDNGVI-VKGTPDYVRSCCEASLKRL-----DVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITAVQMEWSLWTRDIE 694
            V  +GLG  +L+    +PV +E+   ++ +A S G +F+D  + YG +   AN  LL + F+  P   +KV ++ K    G  D     V GT    R C   S+K +      V  IDLY    +D   PIEET+  +K+ V+ G I+ IGL E S + I+RAH V  I A+++ +S+  R+IE
Sbjct:    9 VGPIGLGLKSLT-WTENPVPDEEAFRIMNYALSHGCSFWDAGEFYGLSEPLANLQLLSRYFQKFPDSIDKVFLSVK----GAFDPETHRVHGT----RECITKSIKTVRETLKKVKTIDLYQCAAIDPDTPIEETMACLKEFVDSGDIRCIGLCEPSVEEIKRAHSVVRIAAIEVHYSMLFREIE 184          
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: NORA_ASPPA (Norsolorinic acid reductase OS=Aspergillus parasiticus GN=norA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.815e-16
Identity = 59/207 (28.50%), Postives = 98/207 (47.34%), Query Frame = 2
Query:  143 RVKLGTQGLEVSKLGLGCMNLSSGYSSPVSEED---GISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKMLP-REKVQIATK-------FGVVGLRDNGVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP------DTIRRAHGVHPITAVQMEWSLWTRDIEEEIIPL 712
            R+   + G+ VS L LG M+  +G+   + E D     +M+   +  G  F D A+ Y     E  +G+       R+++ ++TK       FG   ++ N          +R   +ASL++L  DYIDL Y H  D +  +EE +  +  LV  GK+ Y+G+S+         +   RA+G+ P +  Q  WS   RD E +I+P+
Sbjct:   17 RILSPSAGVRVSPLCLGTMSFGNGWKGVMGECDQATSFNMLDTFYESGGNFIDVANFYQGGDTERWVGEWMAQRQNRDEIVLSTKYTMGYTMFGPQKIKSN--FQGNHAKSLRLSVKASLQKLQTDYIDLLYVHMWDFTTSVEEVMRSLNHLVANGKVLYLGVSDTPAWLVVKCNAFARANGLTPFSVYQGHWSSAFRDFERDILPM 221          
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: AAD_PHACH (Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.901e-16
Identity = 61/219 (27.85%), Postives = 107/219 (48.86%), Query Frame = 2
Query:  140 PRVKLGTQ-------GLEVSKLGLGCMNLSSGYS----SPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKMLP-REKVQIATKFGVVGLRDNGVIVKGTPD---YVRSCCEA-------SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH------GVHPITAVQMEWSLWTRDIEEEIIPL 712
            P  KLG         GL VS + LG M++   +       + +E    ++   ++ G  F DTA+VY    +E  +G+  +    R+++ +ATK+ +V  R  G   +  P    YV +  ++       SL++L   YID++Y H  D +  IEE +  +  LV +GK+ Y+G+S+     + +A+      G  P    + EW++  RD+E +IIP+
Sbjct:   10 PPTKLGRHRQLAPGCGLHVSPIQLGAMSIGDKWHPYGMGTMDKEASFKLLDAFYNAGGNFIDTANVYQDETSEEFIGEWMEARGNRDQMVVATKYSLVYKR--GASFEEIPQKTQYVGNSLKSMHISVHDSLRKLRTSYIDIFYVHFWDYTCTIEEVMNGLHNLVAQGKVLYLGVSDTPAWVVSKANNYARMAGKTPFVIYEGEWNITMRDMERDIIPM 226          
The following BLAST results are available for this feature:
BLAST of FC920540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
YQKF_BACSU1.200e-2034.41Uncharacterized oxidoreductase yqkF OS=Bacillus su... [more]
PLR2_SCHPO3.269e-1834.59Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]
KCAB_ORYSJ7.281e-1833.17Probable voltage-gated potassium channel subunit b... [more]
KCAB_SCHPO4.720e-1735.29Putative voltage-gated potassium channel subunit b... [more]
YRPG_BACSU8.051e-1733.33Uncharacterized oxidoreductase yrpG OS=Bacillus su... [more]
NORA_ASPFL3.059e-1629.19Norsolorinic acid reductase OS=Aspergillus flavus ... [more]
YI7E_SCHPO3.995e-1632.27Putative aryl-alcohol dehydrogenase C977.14c OS=Sc... [more]
YEZB_SCHPO5.218e-1634.59Uncharacterized oxidoreductase C3A11.11c OS=Schizo... [more]
NORA_ASPPA6.815e-1628.50Norsolorinic acid reductase OS=Aspergillus parasit... [more]
AAD_PHACH8.901e-1627.85Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaet... [more]

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Properties
Property NameValue
Genbank descriptionC32009G01EF RVDevelop1 Citrus clementina cDNA clone C32009G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920540 ID=FC920540; Name=FC920540; organism=Citrus clementina; type=EST; length=712bp
GNAACCAGAATCCTGTCTCATTCTGCTCATTGCTGGAGTTGGAGTCAACT
GTCTCCCTACTTATTGAAACTTGAAAGACACCCAAAACAAAGAAACCAAA
ACTACAGCTTCAAAAATGGCAGAAGAGAAACTCCAAGTTCCAAGGGTGAA
ACTTGGTACCCAAGGCCTCGAGGTTTCAAAGTTGGGGCTGGGATGCATGA
ACCTGAGTTCTGGTTATAGCTCTCCAGTCTCAGAAGAGGATGGCATCTCC
ATGATAAAACATGCTTTCAGTAAAGGAATCACTTTCTTTGATACTGCTGA
TGTGTACGGACAAAATGCTAATGAAACTCTTCTGGGAAAGGCCTTCAAGA
TGTTGCCCAGAGAAAAGGTACAAATAGCCACAAAGTTTGGGGTTGTAGGA
CTAAGAGATAATGGCGTGATCGTGAAGGGCACCCCTGATTACGTGCGCTC
GTGTTGTGAAGCTAGCTTGAAGCGACTTGATGTGGATTACATTGATTTGT
ATTATCAACATAGAGTGGACACATCAGTCCCTATCGAAGAAACCATTGGC
GAAATGAAGAAGCTGGTGGAGGAGGGTAAAATCAAGTACATTGGTTTGTC
TGAGGCTAGCCCAGACACAATTAGGAGAGCACATGGTGTTCATCCCATCA
CAGCTGTACAAATGGAATGGTCCCTCTGGACTCGTGATATCGAGGAAGAG
ATAATACCCCTC
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