FC920540
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: KCAB2_BOVIN (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.884e-14 Identity = 60/196 (30.61%), Postives = 94/196 (47.96%), Query Frame = 2 Query: 152 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH------PITAVQMEWSLWTRDIEEEIIP 709 LG GL VS LGLG G +++E ++ A+ GI FDTA+VY E +LG K R + I TK +G + G+ K ++ +ASL+RL ++Y+D+ + +R D + P+EET+ M ++ +G Y G S S I A+ V P Q E+ ++ R+ E +P Sbjct: 42 LGKSGLRVSCLGLGTWVTFGGQ---ITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRK----HIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLP 230
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: KCAB2_RAT (Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14 Identity = 60/196 (30.61%), Postives = 94/196 (47.96%), Query Frame = 2 Query: 152 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH------PITAVQMEWSLWTRDIEEEIIP 709 LG GL VS LGLG G +++E ++ A+ GI FDTA+VY E +LG K R + I TK +G + G+ K ++ +ASL+RL ++Y+D+ + +R D + P+EET+ M ++ +G Y G S S I A+ V P Q E+ ++ R+ E +P Sbjct: 42 LGKSGLRVSCLGLGTWVTFGGQ---ITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRK----HIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLP 230
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14 Identity = 60/196 (30.61%), Postives = 94/196 (47.96%), Query Frame = 2 Query: 152 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH------PITAVQMEWSLWTRDIEEEIIP 709 LG GL VS LGLG G +++E ++ A+ GI FDTA+VY E +LG K R + I TK +G + G+ K ++ +ASL+RL ++Y+D+ + +R D + P+EET+ M ++ +G Y G S S I A+ V P Q E+ ++ R+ E +P Sbjct: 42 LGKSGLRVSCLGLGTWVTFGGQ---ITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRK----HIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLP 230
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13 Identity = 59/196 (30.10%), Postives = 93/196 (47.45%), Query Frame = 2 Query: 152 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH------PITAVQMEWSLWTRDIEEEIIP 709 LG GL VS LGLG G +S+E ++ A+ G+ FDTA+VY E +LG K R + I TK +G + G+ K ++ + SL+RL ++Y+D+ + +R D++ P+EE + M ++ +G Y G S S I A+ V P Q E+ L+ R+ E +P Sbjct: 76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRK----HIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLP 264
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13 Identity = 59/196 (30.10%), Postives = 93/196 (47.45%), Query Frame = 2 Query: 152 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH------PITAVQMEWSLWTRDIEEEIIP 709 LG GL VS LGLG G +S+E ++ A+ G+ FDTA+VY E +LG K R + I TK +G + G+ K ++ + SL+RL ++Y+D+ + +R D++ P+EE + M ++ +G Y G S S I A+ V P Q E+ L+ R+ E +P Sbjct: 83 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRK----HIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLP 271
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13 Identity = 59/196 (30.10%), Postives = 93/196 (47.45%), Query Frame = 2 Query: 152 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH------PITAVQMEWSLWTRDIEEEIIP 709 LG GL VS LGLG G +S+E ++ A+ G+ FDTA+VY E +LG K R + I TK +G + G+ K ++ + SL+RL ++Y+D+ + +R D++ P+EE + M ++ +G Y G S S I A+ V P Q E+ L+ R+ E +P Sbjct: 76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRK----HIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLP 264
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13 Identity = 59/196 (30.10%), Postives = 93/196 (47.45%), Query Frame = 2 Query: 152 LGTQGLEVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKAFKMLP--REKVQIATK--FGVVGLRDNGVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH------PITAVQMEWSLWTRDIEEEIIP 709 LG GL VS LGLG G +S+E ++ A+ G+ FDTA+VY E +LG K R + I TK +G + G+ K ++ + SL+RL ++Y+D+ + +R D++ P+EE + M ++ +G Y G S S I A+ V P Q E+ L+ R+ E +P Sbjct: 76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRK----HIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLP 264
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: YP088_YEAST (Putative aryl-alcohol dehydrogenase YPL088W OS=Saccharomyces cerevisiae GN=YPL088W PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13 Identity = 62/218 (28.44%), Postives = 102/218 (46.79%), Query Frame = 2 Query: 137 VPRVKLGTQGLEVSKLGLGCMNLSSGYSSPVSEEDG---ISMIKHAFSKGITFFDTADVYGQNANETLLGK--AFKMLPREKVQIATKF-----GVVGLRDNGVIVKG-----------TPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHGVHPITAVQMEWSLWTRDIEEEIIP 709 V +V+LG GL++S + +GCM+ S + ED ++KH + KG+ FDTAD Y +E ++ + + + RE V I TK + L N + + + ++ + E S+KRL YIDL HR+D P++E + + +VE G ++YIG S A +G + Q ++L R+ E E+IP Sbjct: 4 VKQVRLGNSGLKISPIVIGCMSYGSKKWADWVIEDKTQIFKIMKHCYDKGLRTFDTADFYSNGLSERIIKEFLEYYSIKRETVVIMTKIYFPVDETLDLHHNFTLNEFEELDLSNQRGLSRKHIIAGVENSVKRLGT-YIDLLQIHRLDHETPMKEIMKALNDVVEAGHVRYIGASSMLATEFAELQFTADKYGWFQFISSQSYYNLLYREDERELIP 220
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: ARK74_HUMAN (Aflatoxin B1 aldehyde reductase member 4 OS=Homo sapiens GN=AKR7L PE=2 SV=5) HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13 Identity = 63/184 (34.24%), Postives = 90/184 (48.91%), Query Frame = 2 Query: 188 LGCMNLSSGYSSPVSEEDGISMIKHAF-SKGITFFDTADVYGQNANETLLGKAFKMLPRE--KVQIATKFGV-VGLRDNGVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHGVHPITAVQMEWSLWTRDIEEEIIP 709 LG M + +P S + + AF +G T DTA +Y +ET+LG + +V+IATK +G N + PD VRS E SLKRL +DL+Y H D S P+EET+ +L +EGK +GLS A T+ +++G T Q +S TR +E E+ P Sbjct: 14 LGAMEMGRRMDAPTS-----AAVTRAFLERGHTEIDTAFLYSDGQSETILGGLGLRMGSSDCRVKIATKANPWIG---NSL----KPDSVRSQLETSLKRLQCPUVDLFYLHAPDHSAPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYSATTRQVETELFP 185
BLAST of FC920540 vs. ExPASy Swiss-Prot
Match: ARK73_HUMAN (Aflatoxin B1 aldehyde reductase member 3 OS=Homo sapiens GN=AKR7A3 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13 Identity = 57/181 (31.49%), Postives = 85/181 (46.96%), Query Frame = 2 Query: 188 LGCMNLSSGYSSPVSEEDGISMIKHAF-SKGITFFDTADVYGQNANETLLGKAFKMLPREKVQIATKFGVVGLRDNGVIVKGTPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHGVHPITAVQMEWSLWTRDIEEEIIP 709 LG M + +P S + + AF +G T DTA VY + +ET+LG L ++ + L N + PD +R E SLKRL +DL+Y H D S P+EET+ +L +EGK +GLS A T+ +++G T Q ++ TR +E E+ P Sbjct: 14 LGAMEMGRRMDAPTS-----AAVTRAFLERGHTEIDTAFVYSEGQSETILGGLGLRLGGSDCRVKIDTKAIPLFGNSL----KPDSLRFQLETSLKRLQCPRVDLFYLHMPDHSTPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYNAITRQVETELFP 185 The following BLAST results are available for this feature:
BLAST of FC920540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920540 ID=FC920540; Name=FC920540; organism=Citrus clementina; type=EST; length=712bpback to top |