FC920541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_HHV1K (Ribonucleoside-diphosphate reductase small chain OS=Human herpesvirus 1 (strain KOS) GN=UL40 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16 Identity = 59/205 (28.78%), Postives = 98/205 (47.80%), Query Frame = 3 Query: 102 PNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETV--PCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 P+P+R+ + Q P I + + + W E+ D L+ E F + AF +A+D +V ENL G + + +Y Q IE HS +Y+++ ++D+ R + A T+ P + K W + + E+ I +EGIFF+ SF AI +L+ L+ SN+LISRDE +H +C +Y+ Sbjct: 32 PDPERY-FYTSQCPDINHLRSLSILNRWLETELVFVGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTENLGG-LSGLFEQKDILHYYVEQECIEVAHSRVYNIIQLVLFHNNDQARREYVA-GTINHPAIRAKVDWLEARVRECASVPEKFILMILIEGIFFAASFAAIAYLRTNNLLRVTCQSNDLISRDEAVHTTASCYIYN 233
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_EHV1B (Ribonucleoside-diphosphate reductase small chain OS=Equine herpesvirus 1 (strain Ab4p) GN=20 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.261e-16 Identity = 56/191 (29.32%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 141 PQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL-LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 P I + + A+ W ++ +S DL+ LT E+ F + AF +A+D +V NL G + +Y Q +IE HS +YS + L + D+ + R +I + +K W + + AE+ I +EG+FF+ SF +I +L+ L SN+LISRDE +H +C +Y+ Sbjct: 28 PDIEHLRSLSVANRWLDTDLPISDDLKDVAKLTPAEREFYRFLFAFLSAADDLVNLNL-GDLSALFTQKDILHYYIEQESIEVTHSRVYSAIQLMLFGNDAAARARYVASIIGDAAIGRKVAWLQAKVRECGSVAEKYILMILIEGLFFASSFASIAYLRTHNLFVVTCQSNDLISRDEAIHTRASCCIYN 217
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_BHV1C (Ribonucleoside-diphosphate reductase small chain OS=Bovine herpesvirus 1.1 (strain Cooper) GN=UL40 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.172e-15 Identity = 55/197 (27.92%), Postives = 93/197 (47.21%), Query Frame = 3 Query: 126 FPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLA--GRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL-LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY 707 + + P + + + A+ W E L+ D + L+ E F + AF +A+D +V NL T+ + +Y Q +IE +HS +YS + L + D+ + P V +K W + +E+ AE+ + +EGIFFS SF AI +L+ L +N+LISRDE +H +C ++ Sbjct: 18 YETECPDLDHLRSLSVANRWLETEFPLADDAKDVARLSGAELEFYRFLFAFLSAADDLVNVNLGDLSELFTQKDILH---YYIEQESIEVVHSRVYSAIQLLLFRNDAVARAGYVEGALGDPAVRRKVDWLERRVAAAESVAEKYVLMILIEGIFFSSSFAAIAYLRTHNLFVVTCQTNDLISRDEAVHTAASCCIF 211
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_EHV4 (Ribonucleoside-diphosphate reductase small chain OS=Equine herpesvirus 4 (strain 1942) PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15 Identity = 54/191 (28.27%), Postives = 94/191 (49.21%), Query Frame = 3 Query: 141 PQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL-LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 P I + + A+ W ++ +S DL+ L E+ F + AF +A+D +V NL G + +Y Q +IE HS +YS + L + D+ + R ++ + K +W + ++ AE+ I +EG+FF+ SF +I +L+ L SN+LISRDE +H + +C +Y+ Sbjct: 27 PDIEHLRLLSVANRWLDTDLPISDDLKDVAKLAPAEREFYRFLFAFLSAADDLVNLNL-GDLSALFTQKDILHYYIEQESIEVTHSRVYSAIQLMLFGNDATARARYVASVVKDVAIDLKVSWLQAKVRECKSVAEKYILMILIEGVFFASSFASIAYLRTHNLFVVTCQSNDLISRDEAIHTNASCCIYN 216
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_SUHVK (Ribonucleoside-diphosphate reductase small chain OS=Suid herpesvirus 1 (strain Kaplan) GN=RR2 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15 Identity = 54/195 (27.69%), Postives = 92/195 (47.18%), Query Frame = 3 Query: 135 QYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAG--RFMTEVQVAEARAFYGFQIAIENIHSEMYSLL-LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 710 Q P + + + A+ W ++ L D + AL+ E F + AF +A+D +V NL T+ + +Y Q IE +HS +YS + L + D+ + R A + +K W + + + AE+ + +EGIFF+ SF +I +L+ L SN+ ISRDE +H +C +Y+ Sbjct: 8 QCPDMDHLRSLSVANRWLETDLPLGDDAKDVAALSEPELEFYRFLFAFLSAADDLVNVNLGSLSELFTQKDILH---YYIEQECIEVVHSRVYSAIQLMLFRGDAAARERYVRAALRDEAIRRKVEWLDSRVAECASVAEKYLLMILIEGIFFASSFASISYLRTHNLFVVTCQSNDFISRDEAIHTSASCCIYN 199
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_SHV21 (Ribonucleoside-diphosphate reductase small chain OS=Saimiriine herpesvirus 2 (strain 11) GN=60 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15 Identity = 51/189 (26.98%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 153 EMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHA-IETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 716 E+ K+ + W +V L D+ + L + F + F ++ +V N+ +++ + +Y Q+A+ENIH ++Y+ +L K++ + + I + +K W + + AE+++ F VEGIFF SF +I + RG+M G+ +N+ I+RDE LH A LLY+ + Sbjct: 18 ELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINIED-LLSQFDSHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYACDIMNDSALQEKLRWLNGRVTEASDKAEKILLFLLVEGIFFISSFFSIGLFRVRGIMNGICLANDYIARDEMLHTSAAALLYNTM 205
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: YVFB_VACCC (Uncharacterized 8.3 kDa protein OS=Vaccinia virus (strain Copenhagen) GN=F ORF B PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13 Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = -3 Query: 542 NKLYN-RHAKSQWRPSSREINSFENVNPGINPRFLSQNIAQKLPEKKIPSTQANAINLS 715 NK N +HAKSQ RPSS I+S ENV+PGI PRFLSQN+ PEKKIPST A AI+LS Sbjct: 19 NKCLNIKHAKSQCRPSSLLISSLENVSPGIRPRFLSQNMEANDPEKKIPSTAAKAISLS 77
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_TREPA (Ribonucleoside-diphosphate reductase subunit beta OS=Treponema pallidum GN=nrdB PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12 Identity = 51/191 (26.70%), Postives = 89/191 (46.60%), Query Frame = 3 Query: 132 IQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENL--AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKK---ATWALNWIDGSETFAERLIAFA--CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH 683 ++YP + + Y++A +FW EE+++S D++ + L+A EK +L+F D I NL G+++T ++ FQ E +HS+ YS +L+T + + L+ + +A+ + D A +A A +EGI+F F + L + MPG I+RDE H Sbjct: 41 MKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYRNLSAIEKTAYDKILSFLIFLDSIQTANLPNIGQYITANEINLCLTIQAFQ---EAVHSQSYSYMLDTICSPEERNDILYQWKDDEHLLARNKFIGNLYNEFQDDKSVLALLKVAIANYVLEGIYFYSGFMFFYNLGRNNKMPGSVQEIRYINRDENTH 228
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_CHLTR (Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia trachomatis GN=nrdB PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12 Identity = 50/206 (24.27%), Postives = 92/206 (44.66%), Query Frame = 3 Query: 123 MFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA--LTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWAL-------------NWIDGSETFAERLIAFACV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 692 + PI+Y WE Y A+ W E+ + +D+ W++ L+ DE+ + L FF+ ++ +V N+ V EAR + Q E +H+ + + E+ D E +F+A + K + + + ++G + F + L+ + + EGIFF F I ++ M G+ + I RDE +H +F Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE---IFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLNF 233
BLAST of FC920541 vs. ExPASy Swiss-Prot
Match: RIR2_CHLMU (Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia muridarum GN=nrdB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12 Identity = 50/206 (24.27%), Postives = 92/206 (44.66%), Query Frame = 3 Query: 123 MFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA--LTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWAL-------------NWIDGSETFAERLIAFACV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 692 + PI+Y WE Y A+ W E+ + +D+ W++ L+ DE+ + L FF+ ++ +V N+ V EAR + Q E +H+ + + E+ D E +F+A + K + + + ++G + F + L+ + + EGIFF F I ++ M G+ + I RDE +H +F Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEISMGKDIELWKSNVLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE---IFNAYNERASIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFIKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMVGIGEQYQYILRDETIHLNF 233 The following BLAST results are available for this feature:
BLAST of FC920541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920541 ID=FC920541; Name=FC920541; organism=Citrus clementina; type=EST; length=717bpback to top |