FC920543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920543 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.193e-22 Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 158 ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 427 ++CG V +A CI YLR GP+P CCNGV++L +A TT DR+TAC CL A+ +I +N A GLP CGVSIPYKIS ST+C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAACCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of FC920543 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.659e-22 Identity = 53/114 (46.49%), Postives = 76/114 (66.67%), Query Frame = 2 Query: 89 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPV-PCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 427 A + L++ ++ ML P +A AI CG V + PC+ Y++ GGP P CC+GV++L+ AR+ DRQ+ACNCLK A I NLN +NA +P CGV++PY IS++ DCS+V Sbjct: 1 AQVMLMAVALVLMLAAVPRAAVAIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of FC920543 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.010e-21 Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 155 AITCGQVTGSLAPCIVYLRSGGPIPVPCC-NGVRSLNAAARTTPDRQTACNC-LKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 427 AI+CGQV+ ++ PC+ Y R G P C +GVRSLNAAARTT DR+ ACNC LK AA + LN A +P CGV +PY IS S DCS+V Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of FC920543 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.010e-21 Identity = 52/115 (45.22%), Postives = 72/115 (62.61%), Query Frame = 2 Query: 86 MAALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 427 MA + LV+ V+ V ++ A++CG VT S+APC+ Y+ P CC+GVR+LN A ++ DR+TAC+CLK A S NLN NA +P CGVS+ + IS S DCSK+ Sbjct: 8 MALVALVA--VVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of FC920543 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.010e-21 Identity = 52/115 (45.22%), Postives = 72/115 (62.61%), Query Frame = 2 Query: 86 MAALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 427 MA + LV+ V+ V ++ A++CG VT S+APC+ Y+ P CC+GVR+LN A ++ DR+TAC+CLK A S NLN NA +P CGVS+ + IS S DCSK+ Sbjct: 8 MALVALVA--VVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of FC920543 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21 Identity = 55/118 (46.61%), Postives = 71/118 (60.17%), Query Frame = 2 Query: 80 SQMAALKL-VSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIP-VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 427 ++ AA KL + ALV ML+ + AITCGQV+ +L PC Y + G P CC+GV+ L AR+T D+Q C CLK AG+ N A G+P CGVS+PY IS S DCSK+ Sbjct: 2 ARTAATKLALVALVAAMLLVA--ADAAITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAY---NAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of FC920543 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20 Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 2 Query: 113 LVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNP---NNAVGLPRACGVSIPYKISISTDCSKVR 430 L +C+++ A++C V L PC+ Y+ GGP+P CCNG+ +L + A+T+ DRQ C C+K A G + L+P NA+ LP CGV +PYK S STDC ++ Sbjct: 6 LAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGL-TLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113
BLAST of FC920543 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.245e-20 Identity = 54/119 (45.38%), Postives = 75/119 (63.03%), Query Frame = 2 Query: 86 MAALKLVSALVLCMLVT-GPLSAQA-ITCGQVTGSLAPCIVYLRSGG-PIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPY--KISISTDCS 421 MA L + LV ++ GP++A+A ++CG+V +L PC YL +GG P P CCNGVR LN TT DR+ AC C+K AA ++ P LN + A G+PR CG+ IPY +I +T C+ Sbjct: 1 MAGLMKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119
BLAST of FC920543 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.783e-18 Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 113 LVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 427 LV+ +L+ +AI C QV LA C+ YL++GG CCNG+ SL AAA DRQ ACNCLK A +IP +N + A LP CGV+I S + DC+ + Sbjct: 14 LVITILLGIAYHGEAIACPQVNMYLAQCLPYLKAGGNPSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of FC920543 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18 Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = 2 Query: 113 LVLCMLVTGPL---SAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAG--SIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 430 L LC+L+ S AI+C V +L PC+VY+ GG IP CCNG+R L+ A + D+Q C C+K G S ++ A LP CGV +PYKI ST+C+ ++ Sbjct: 6 LPLCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116 The following BLAST results are available for this feature:
BLAST of FC920543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920543 ID=FC920543; Name=FC920543; organism=Citrus clementina; type=EST; length=682bpback to top |