FC920544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 50/173 (28.90%), Postives = 83/173 (47.98%), Query Frame = 2 Query: 11 NDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKG--ITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSI 523 N C +W GV+C + V + L G + G I P L +L SL + + ++G +P I S+P L + L N SG++P + R +L +L+++ N+ +G IP + NL L L L+NN++SGP+P N ++G+IPS++ Sbjct: 71 NHICKSWVGVTCTSDGTSVHALRLPGIG-------------LLGPIPPNT--LGKLESLRILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVSR--QLNILDLSFNSFTGKIPATFQNLKQLTGLSLQNNKLSGPVPNL--DTVSLRRLNLSNNHLNGSIPSAL 224
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 53/167 (31.74%), Postives = 83/167 (49.70%), Query Frame = 2 Query: 26 NWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVC-KLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSI 523 NW GV C E++RV + L G + ++G I + LT+L +L+L ++G +P+ +S+ LR L L GN+ SG+IP + L L LN+A N+ +G I NL+ L L L NN++SG IP N ++G+IP ++ Sbjct: 63 NWAGVKC--ESNRVTALRLPGVA-------------LSGDIPEGIFGNLTQLRTLSLR-LNALSGSLPKDLSTSSNLRHLYLQGNRFSGEIPEVLFSLSHLVRLNLASNSFTGEISSGFTNLTKLKTLFLENNQLSGSIP---DLDLPLVQFNVSNNSLNGSIPKNL 210
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12 Identity = 51/174 (29.31%), Postives = 86/174 (49.43%), Query Frame = 2 Query: 29 WYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADL 550 W GV C E+ RV + L G ++G + A+ LT+L +L+ + + G +P +++ LR L L GN SG+IP + L + +N+A NN G IP ++ + + L L L++N+++GPIP NQ++G+IP +S + + A L Sbjct: 55 WGGVQC--ESGRVTALRLPGVG-------------LSGPLPIAIGNLTKLETLSFR-FNALNGPLPPDFANLTLLRYLYLQGNAFSGEIPSFLFTLPNIIRINLAQNNFLGRIPDNVNSATRLATLYLQDNQLTGPIP---EIKIKLQQFNVSSNQLNGSIPDPLSGMPKTAFL 209
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12 Identity = 48/150 (32.00%), Postives = 74/150 (49.33%), Query Frame = 2 Query: 8 GNDCCHNWYGVSCDQ---ETHRVADINLRGESEDPI--FQRAHRTGYMTGYISPAVCKLTRLSSLTL-ADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPI 439 G+ C +W GV C+ ET + NL GE + F + +I ++ +S L TG IP +SS+ L ++ L N LSG IP L + ++++ NN+SG +PPS+ NLS+L L L+NN +SG + Sbjct: 61 GDPCGESWQGVLCNASQVETIILISANLGGELGVGLNMFTSLKAMDFSNNHIGGSIPSTLPVSLQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPSMQNLSTLTSLLLQNNHLSGEL 210
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 260 LDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIAN-LSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPASLGK 601 L L +L+G+IP + L L+++ N++SG+IP I + L L+ LDL N++ G IP + N++SG+IPS +S + RL L L+ N +SG IP+ L + Sbjct: 77 LQLQSMQLAGEIPESLKLCRSLQSLDLSGNDLSGSIPSQICSWLPYLVTLDLSGNKLGGSIPTQIVECKFLNALILSDNKLSGSIPSQLSRLDRLRRLSLAGNDLSGTIPSELAR 191 HSP 2 Score: 67.3958 bits (163), Expect = 8.306e-11 Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 2 Query: 62 RVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISS-IPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSV 451 ++ ++ E E+ I ++ + G I ++ L SL L+ ++G IP I S +P+L LDL GNKL G IP I L L ++DN +SG+IP ++ L L L L N +SG IP + Sbjct: 60 KLTGVSCWNEKENRIISLQLQSMQLAGEIPESLKLCRSLQSLDLSG-NDLSGSIPSQICSWLPYLVTLDLSGNKLGGSIPTQIVECKFLNALILSDNKLSGSIPSQLSRLDRLRRLSLAGNDLSGTIPSEL 189
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 48/150 (32.00%), Postives = 72/150 (48.00%), Query Frame = 2 Query: 149 SPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIAN-LSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPASL 595 S ++CKLT +S W I L L +LSG IP + L L+++ N+ SG IP I + L L+ LDL N++SG IP + N+++G+IPS ++ + RL L L+ N +SG IP+ L Sbjct: 48 SSSICKLTGVSC-----WNAKENRILS----------LQLQSMQLSGQIPESLKLCRSLQSLDLSFNDFSGLIPSQICSWLPYLVTLDLSGNKLSGSIPSQIVDCKFLNSLALNQNKLTGSIPSELTRLNRLQRLSLADNDLSGSIPSEL 182
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: Y1143_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 50/155 (32.26%), Postives = 77/155 (49.68%), Query Frame = 2 Query: 140 GYISPAVCKLTRLSS----LTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPAS 592 G P ++ RLSS L L+ I+G IP+ ISS+ LR L L N +G +P D+ L L LN+ N + + PS+A S+L+ + L+NN IP + N+ +G+IP + + L +L L+ N +SG +P S Sbjct: 118 GISGPLPSQIIRLSSSLQSLNLSS-NFISGNIPKEISSLKNLRSLVLANNLFNGSVP-DLRGLSNLQELNLGGNKLGPEVVPSLA--SNLITISLKNNSFGSKIPEQIKKLNKLQSLDLSSNKFTGSIPRFLLSLPSLQNLSLAQNLLSGSLPNS 268
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 42/120 (35.00%), Postives = 61/120 (50.83%), Query Frame = 2 Query: 233 ISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPAS 592 +S + LR+L L N L G IP D+ L L L ++ N SGA PPSI +L LM L + +N SG IP + N+ +GT+PS L ++S N ++G+IP + Sbjct: 93 LSRLDQLRVLSLENNSLFGPIP-DLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPSLNQSF--LTSFNVSGNNLTGVIPVT 209
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 61/220 (27.73%), Postives = 94/220 (42.73%), Query Frame = 2 Query: 2 WT---GNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMIYRLADLDLSMNQISGMIPASLGKMAVLATLNLDFNKYRVP 652 WT G+ C NW GV+C RV I L G +G + GY+ + KLT L+ L L+ + G++P P L+ L+L N+ +G + ++ L LN+ N G I + L SL LD N + +P + NQ SGT+ + L L+++ N +G IP+SL + ++ N FN P Sbjct: 51 WTAAAGDPCGQNWRGVTCSGS--RVTQIKLSG---------LELSGTLGGYM---LDKLTSLTELDLSS-NNLGGDLP--YQFPPNLQRLNLANNQFTGAASYSLSQITPLKYLNLGHNQFKGQIAIDFSKLDSLTTLDFSFNSFTNSLPATFSSLTSLKSLYLQNNQFSGTVDVLAGL--PLETLNIANNDFTGWIPSSLKGITLIKDGN-SFNTGPAP 250
BLAST of FC920544 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 56/183 (30.60%), Postives = 82/183 (44.81%), Query Frame = 2 Query: 8 GNDCCHNWYGVSC---DQETHRVADINLRGESEDPIFQRAHRTGY-----MTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNNRISGPIPGSVGXXXXXXXXXXXXNQISGTIPSSISMI 532 G+ C W G+ C D + V NL+GE D + + G G P+ +T A+ TG IP + ++ FL + L N LSG++P L L L+I+ NNISG +PPS+ NL +L L ++NN++SG + V N SG IP + I Sbjct: 59 GDPCGEAWQGIICNVSDIISITVNAANLQGELGDNLAKFTSIRGIDFSNNRIGGSIPSTLPVTLQHFFLSANQ--FTGSIPESLGTLSFLNDMSLNDNLLSGELPDVFQNLVGLINLDISSNNISGTLPPSMENLLTLTTLRVQNNQLSGTL--DVLQGLPLQDLNIENNLFSGPIPDKLLSI 237 The following BLAST results are available for this feature:
BLAST of FC920544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920544 ID=FC920544; Name=FC920544; organism=Citrus clementina; type=EST; length=696bpback to top |