FC920548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.065e-56 Identity = 105/186 (56.45%), Postives = 137/186 (73.66%), Query Frame = 1 Query: 70 STMSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK 627 S + S GYDRHITIFSPEGRL+QVEYAFKA + S+ VRGKD V++QKKVPDKLLD T+V+++F I++ +G++ G DAR +A+ EAAEFR+KYGY+MP DVLAK +A+ SQ+YTQ AYMRPLGV+ +S+DEE GP ++K DPAG++ G+KAT+ G K+QE LE K Sbjct: 2 SGAAAASAAGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFK 187
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA6_DICDI (Proteasome subunit alpha type-6 OS=Dictyostelium discoideum GN=psmA6 PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.391e-56 Identity = 110/212 (51.89%), Postives = 151/212 (71.23%), Query Frame = 1 Query: 76 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQKLCRLQF--HPASVLQKILG 705 MSR GYD I IFSP+G+L+Q+EYAFKA+K G+TS+G+RGKD V V TQKK+PDKL+D SVT L+ +T Y+G + TG+ D+++ +A E A F K+GY++P +VLAK +AD +Q+ TQHA RPLGV +++ ID+E GP+LFK DPAG F G+KAT+AG KEQE+ NFLEKK K++P + + ++ S LQ +LG Sbjct: 1 MSRSGTAGYDMSI-IFSPQGKLYQIEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKLIDPKSVTSLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNVLAKRMADIAQLSTQHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLEKKFKSNPQLSKDETIQVSLIVMAISTLQSVLG 211
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 9.013e-56 Identity = 108/184 (58.70%), Postives = 136/184 (73.91%), Query Frame = 1 Query: 76 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK 627 MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ +T++ ++ D V TQKKV +K + +VTHLF ITK +G TG AD+R+ VQ+ARYEAA FR+KYGYEMPVDVL + IAD +QVYTQ+A MRPLG ++++ D E GP ++K DPAG+F G KA S G K EA ++LEKK K Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYK 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.105e-48 Identity = 95/210 (45.24%), Postives = 141/210 (67.14%), Query Frame = 1 Query: 76 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQKLCRLQFHPASVLQKILG 705 MSRGS G+DRHITIFSPEGR++QVEYAFKA+ + +T++ V+G D+ + QK+VPD L+ +VT ++ I++ +G A GM DA+ +++A+ EAA +++K GY+MP ++LAK +AD +Q YTQ+A MR LG + +S D+E GP +++ DPAG++ G K S G+K+ A +FLEKK+K T + L LQ LG Sbjct: 1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAI---EALQTSLG 207
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.888e-37 Identity = 92/212 (43.40%), Postives = 129/212 (60.85%), Query Frame = 1 Query: 88 SGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID--EECG---PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQKLCRLQFHPASVLQKILGE 708 S G+D++IT+FSPEG L+QVEYAFKAV AG+ ++ +R KD+V V TQ VPDKL+ ++T L+ + G+ TG D + LVQ+AR EA+E++++YG M V VLAK D +QV TQ A MR +G + + ++ +E G P+++ DPAG H A + G K+ EA FLEKK KN P T + + LQ LGE Sbjct: 2 SRAGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGGAAVH-ACAVGKKQIEACAFLEKKQKNAPFHTLSQK-EAAMIALAALQSALGE 211
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.221e-37 Identity = 79/178 (44.38%), Postives = 116/178 (65.17%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR IT+FSP+GRLFQVEYA +AVK G T++G++ ++ V + K+V KL++ S+ ++ I ++G G+ ADAR LV++AR EA +R+ YG + VDVL K I D QVYTQH +RP G ++ +D + G RLF+ DP+G HKAT+ G QEA++ E++ + D Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKR-GTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYRED 185
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.333e-34 Identity = 77/179 (43.02%), Postives = 108/179 (60.34%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR ITIFSPEGRL+QVEYA +AV+ G T++G++ KD V + +++ KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K D Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSED 185
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34 Identity = 76/179 (42.46%), Postives = 112/179 (62.57%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQVEYA +AVK G TS+GV+ K+ + +V K+ KL++ S+ +F I +++G +G+ ADAR ++++AR EA R Y + V+ LAK I D Q+YTQH +RP G ++ ++ G RLF+ DP+G +KAT+ G A+ EKK +D Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGR-GCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDD 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.425e-34 Identity = 75/178 (42.13%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR IT+FSPEGRL+QVEYA +AV+ G T+IG+ KD V + +++ KL+ S+ +F I ++ +G+ ADAR L+ +AR EA +R YG E+ +++LAK I D Q YTQH +RP GV ++ ID+ RLF+ DP+G +KAT+ G + LEK+ ++D Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRR-GTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKN-EARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDD 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.697e-34 Identity = 74/179 (41.34%), Postives = 114/179 (63.69%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQV+YA +AVK G T++GV+ KD V + +K+V KL++ S +F I ++ ++G+ ADAR LV +AR EA +R YG +P+ VL K I D Q++TQ+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+ E+K +++ Sbjct: 9 GYDRAITVFSPDGRLFQVQYAREAVKR-GATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDE 184 The following BLAST results are available for this feature:
BLAST of FC920548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920548 ID=FC920548; Name=FC920548; organism=Citrus clementina; type=EST; length=722bpback to top |