FC920548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33 Identity = 75/178 (42.13%), Postives = 114/178 (64.04%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR IT+FSP+GRLFQVEYA +AVK G T++G++ + V +++ KKV +L++ S+ + I Y+ + +G+ ADAR LV AR A + + YG + ++ L K +AD+ Q YTQ+ +RP GV + ID + GPRLF CDPAG +KAT+ G + ++FLE++ K + Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKK-GSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKEN 183
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33 Identity = 73/179 (40.78%), Postives = 111/179 (62.01%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ KD V + +K++ KL++ +S +F I ++ +G+ ADAR LV +AR EA +R YG +P+ VL K I D Q +TQ+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+ E+ ++D Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33 Identity = 71/179 (39.66%), Postives = 109/179 (60.89%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I ++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + D Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDN-KPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.209e-33 Identity = 74/179 (41.34%), Postives = 108/179 (60.34%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K SV + ++K+ LLD S+ +F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQH +RP GV ++ ID+ P+LF +P+G + ++A + G A FLEK K D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED 185
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32 Identity = 72/179 (40.22%), Postives = 107/179 (59.78%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQH +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED 185
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32 Identity = 72/179 (40.22%), Postives = 107/179 (59.78%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQH +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED 185
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32 Identity = 72/179 (40.22%), Postives = 107/179 (59.78%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQH +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED 185
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32 Identity = 72/179 (40.22%), Postives = 107/179 (59.78%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQH +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED 185
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32 Identity = 72/179 (40.22%), Postives = 107/179 (59.78%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQH +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED 185
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32 Identity = 72/179 (40.22%), Postives = 107/179 (59.78%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQH +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED 185 The following BLAST results are available for this feature:
BLAST of FC920548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920548 ID=FC920548; Name=FC920548; organism=Citrus clementina; type=EST; length=722bpback to top |