FC920548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32 Identity = 74/178 (41.57%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR IT+FSP+GRLFQVEYA +AVK G T++G++ KD V ++++KKV +L++ TS+ + I + + +G+ ADAR L+ AR + + YG M ++ L K +AD+ Q YTQ+ +RP GV + +D GPRLF CDPAG +K S G + + +LEK+ K + Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKK-GSTALGIKFKDGVALISEKKVRSRLVEKTSLEKIQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQYGGVRPYGVSIIFAGLD-SIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKEN 183
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.076e-32 Identity = 70/179 (39.11%), Postives = 110/179 (61.45%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ + V + +K++ +L++ S +F I ++ ++G+ ADAR LV +AR EA +R YG PV V+ K I D Q++TQ+ +RP G ++ I++ P L++ DP+G +F KA + G A+ E+K ++D Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGINDR--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDD 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.076e-32 Identity = 70/179 (39.11%), Postives = 110/179 (61.45%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ KD V + +K++ +L++ S +F I ++ ++G+ ADAR LV +AR EA R YG P+ V+ K I D Q++TQ+ +RP G ++ ++++ P L++ DP+G +F KA + G A+ E K ++D Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKCKDGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDD 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.185e-31 Identity = 70/179 (39.11%), Postives = 110/179 (61.45%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ + V + +K++ +L++ S +F I ++ ++G+ ADAR LV +AR EA R YG P+ V+ K I D Q++TQ+ +RP G ++ ++E+ P L++ DP+G +F KA + G A+ E+K K+D Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDD 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.022e-31 Identity = 70/179 (39.11%), Postives = 109/179 (60.89%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ K V + +K++ +L++ +S +F I ++ +G+ ADAR LV +AR EA +R YG +P+ VL K I D Q +TQ+ +RP G ++ ++E+ P L++ DP+G +F KA + G A+ E+ +D Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDD 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.641e-31 Identity = 69/179 (38.55%), Postives = 109/179 (60.89%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ K+ V + +K++ KL++ +S +F I ++ +G+ ADAR LV +AR EA +R YG +P+ VL K I D Q +TQ+ +RP G ++ ++++ P L++ DP+G +F +A + G A+ E +D Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDD 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31 Identity = 70/181 (38.67%), Postives = 109/181 (60.22%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 639 GYDR IT+FSP+GRL+QVEYA +AVK G T++G++ D V ++ K+V KLL+ +S+ +F I +++G+ ++G+ DAR LV +AR E R Y + V+ LAK + D Q TQ+ +RP G ++ + + RLF+ DP+G +KAT G+ A+ E++ D A Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKR-GTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTLTQYGGIRPYGTALLIAGVSDG-ESRLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADLA 186
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.003e-30 Identity = 71/179 (39.66%), Postives = 109/179 (60.89%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR ITIFSP+G L+QV+YAF+AVK G T++GV+ K++V ++ +KK +LLD S+ +F + ++G G+ +D R L+ AR + + R Y + +D L K I+D Q+YTQH +RP GV +V +D +LF +P+G F ++A + G A ++LEK K D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTTLGVKTKNAVVILGEKKKASQLLDVDSIEKVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGGVDRGV-TKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKED 185
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30 Identity = 72/180 (40.00%), Postives = 111/180 (61.67%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSI-DEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR IT+FSP+GRLFQVEYA +AVK G TSIG++ + + + K+ L++ TS+ +F I +++G +G+ ADAR LV++AR EA + Y + VD L+K + D Q+YTQ+ +RP G ++ + D C +LF+ DP+G +KAT+ G A++ E + K+D Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNGGVRPFGSALIIGGVYDGIC--KLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDD 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.712e-30 Identity = 70/179 (39.11%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR ITIFSP+G L+QV+YAF+AVK G T++GV+ K V ++ +K+ +LLD + +F + ++G G+ +D R L+ AR +A + R Y + ++ L K I+D Q YTQH +RP GV +V ID+ P+L +P+G F + A + G A +LEK K D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKR-GWTTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLEKNYKED 186 The following BLAST results are available for this feature:
BLAST of FC920548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920548 ID=FC920548; Name=FC920548; organism=Citrus clementina; type=EST; length=722bpback to top |