FC920548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.712e-30 Identity = 69/183 (37.70%), Postives = 108/183 (59.02%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFT 645 GYDR IT+FSP+GRL+QVEYA +AVK G T++G++ + V ++ K+V +LL+ S+ +F I ++G+ ++G+ DAR+LV +AR E+ R Y + V++LAK + D Q YTQ RP G ++ + + RLF+ DP+G +KAT G I E + + D F+ Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKR-GTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTYTQFGGARPYGTALLIAGVSDG-EARLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQEDADFS 188
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.980e-30 Identity = 67/175 (38.29%), Postives = 108/175 (61.71%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKK 621 GYDR IT+FSP+GRL+QVEYA +AVK G T++G++ D + ++ K+V KLL+ +S+ +F I ++G+ ++G+ DAR+LV +AR E+ R Y ++ V++L+K + D Q YTQ RP G ++ I + RLF+ DP+G +KAT G+ + E++ Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKR-GTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQFGGARPYGTALLIAGISDG-QFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEE 180
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.980e-30 Identity = 67/178 (37.64%), Postives = 101/178 (56.74%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR TIFSPEG L+QV YAF+AVK G TS+G++ + V + +K+ L+D + ++ I ++G+ GM D R L+ AR R YG PV+++AK +AD Q YTQH +RP GV + ++ + ++++ DP G +F KA + G EQ A EK ++D Sbjct: 12 YDRAATIFSPEGDLYQVRYAFEAVKK-GWTSLGIKTNEGVVIAAEKRFIGPLVDIDDIDKIYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSD 188
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 8.495e-30 Identity = 68/179 (37.99%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR ITIFSP+G L+QV+YAF+AVK G T++GV+ K V ++ +K+ +LLD S+ +F + ++G G+ +D R L+ AR +A + R Y + +D L K ++D Q+YTQH +RP GV ++ ID P+L +P+G F + A + G A + EK + D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTTLGVKTKAGVVLIGEKRKATQLLDVDSIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYRED 186
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.109e-29 Identity = 71/179 (39.66%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YD TIFSPEGRL+QVEYA +A+ AG ++IG+ KD V ++ +KKV KLL TS ++ I ++ G+ +DA L+ AR +A + F Y MPV+ L + + D Q YTQ +RP GV + D+ G +L+ DP+G++ G KAT+ G Q A + L++ K+D Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILAKDGVVLIGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKDD 182
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA4_CAEEL (Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.472e-29 Identity = 68/178 (38.20%), Postives = 107/178 (60.11%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH-LFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKN 630 YD TIFSPEGRL+QVEYA +A+ AG T +G+ + + V ++K KLLD + +T ++ ++ + G+TADA L+ R+ AA +R YG EMPV+ L + + ++ Q YTQ RP GV + + D+ G +L++ DP+G++ G KAT G Q A+ L+++ K+ Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAG-TCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKS 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.216e-29 Identity = 71/179 (39.66%), Postives = 104/179 (58.10%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YD TIFSPEGRL+QVEYA +A+ AG ++IG+ KD V +V +KKV KLL TS ++ I ++ G+ +DA L+ AR +A + F Y MPV+ L + + D Q YTQ+ + P GV + D+ G +LF DP+G++ G KA + G Q A + L++ K+D Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKDD 182
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.506e-29 Identity = 70/179 (39.11%), Postives = 104/179 (58.10%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YD TIFSPEGRL+QVEYA +A+ AG ++IG+ KD V ++ +KKV KLL TS ++ I ++ G+ +DA L+ AR +A + F Y MPV+ L + + D Q YTQ +RP GV + D+ G +L+ DP+G++ G KA + G Q A + L++ K+D Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDD 182
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.392e-29 Identity = 70/177 (39.55%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK 627 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D SV + + ++ L G+ ADAR LV +AR E R + V+ + ++IA Q YTQ +RP G+ +++ D G P L++ DP+G F KA + G FLEK K Sbjct: 4 YDRAITVFSPDGHLFQVEYAMEAVRK-GNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYK 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA4_YEAST (Proteasome component Y13 OS=Saccharomyces cerevisiae GN=PRE9 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.392e-29 Identity = 66/179 (36.87%), Postives = 102/179 (56.98%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDH-TSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YD TIFSPEGRL+QVEYA +++ AG T+IG+ D + + ++KV LL+ TS L+ + + + G+TADA L+ AR A + Y ++PV++L + ++D Q YTQH +RP GV + D+ G +L+ +P+G++ G KA S G A L+ K+D Sbjct: 6 YDSRTTIFSPEGRLYQVEYALESISHAG-TAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDD 183 The following BLAST results are available for this feature:
BLAST of FC920548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920548 ID=FC920548; Name=FC920548; organism=Citrus clementina; type=EST; length=722bpback to top |