FC920548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.227e-28 Identity = 70/178 (39.33%), Postives = 103/178 (57.87%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR IT+FSP+G LFQVEYA +AVK G T++GVRGKD V + +KK KL D +V + + + + G+TADAR ++ +AR E R + V+ + ++IA Q YTQ RP G+ A+++ D + PRL++ DP+G + KA + G + FLEK +D Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKK-GSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDD 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.227e-28 Identity = 66/177 (37.29%), Postives = 101/177 (57.06%), Query Frame = 1 Query: 88 SGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 618 S YDR IT+FSP+G LFQVEYA +AV+ G ++GVRGKD + + +KK KL D S+ + + ++ L G+TAD+R L+ +A E +R V+ ++K+IA Q YTQ +RP G+ +++ D + P L++ DP+G + KA + G + FLEK Sbjct: 2 SSARYDRAITVFSPDGHLFQVEYAMEAVRK-GTVAVGVRGKDVIVLGVEKKATAKLQDARSIRKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQRYTQSGGVRPFGISTLIVGFDTDGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEK 177
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.227e-28 Identity = 73/181 (40.33%), Postives = 105/181 (58.01%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDH-TSVTH-LFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATS-AGLKEQEAINFLEKKMKND 633 YD+ TIFSPEGR++QVEYA A++ AG T +G+ KD + + +KK KLLD TS++ +F I +++ G+T+DA L+ AR + F ++Y MPV+ L I D Q YTQ+ +RP GV + D G +L++ DP+G+F G KATS G Q A + L K D Sbjct: 5 YDQRTTIFSPEGRVYQVEYAMTAIRHAGAT-VGILAKDGIVLAAEKKTTAKLLDSSTSISEKMFKIDEHVVCAVAGITSDANILINYARLSSQRFFYQYQEPMPVEQLVSQICDTKQGYTQYGGLRPFGVSFLYAGWDRHYGFQLYQSDPSGNFAGWKATSIGGENSQVAQSVLRSNYKPD 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 2.092e-28 Identity = 71/179 (39.66%), Postives = 102/179 (56.98%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GY +T FSP G+L Q+EYA AV AAG S+G++ + V + T+KK L D SV + PITK++G++ +GM D R LV++AR A ++ Y +P L + +A Q YTQ +RP GV ++ DE+ P LF+ DP+G +F KAT+ G FLEK+ D Sbjct: 5 GYSFSLTTFSPSGKLVQIEYALAAV-AAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDED-RPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNED 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.733e-28 Identity = 70/179 (39.11%), Postives = 104/179 (58.10%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GYDR ITIFSPEG+++QVEYA +AVK G ++GV+ K V + +K+ L D +S+ ++ I +++ +G+ ADAR L+ AR A RF Y + V+ L K + + Q YTQ RP GV ++ +D G RL++ DP+G + G+ AT+ G + FLEK K D Sbjct: 8 GYDRAITIFSPEGKIYQVEYAGEAVKR-GWPTVGVKCKAGVVLTAEKRKISALFDSSSLEKIYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGVDRH-GARLYQTDPSGVYIGYFATAIGAESGTITEFLEKNYKFD 184
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.733e-28 Identity = 67/178 (37.64%), Postives = 105/178 (58.99%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR IT+FSP+G LFQVEYA +AVK G T++G+RGKD V + +KK KL + +V + + +++ + G+TADAR ++ +AR E R + V+ + ++IA Q YTQ RP G+ A+++ D + PRL++ DP+G + KA + G + FLEK ++ Sbjct: 5 YDRAITVFSPDGHLFQVEYAQEAVKK-GSTAVGIRGKDIVVLGVEKKSVAKLQEERTVRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDE 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.569e-28 Identity = 69/178 (38.76%), Postives = 103/178 (57.87%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR IT+FSP+G LFQVEYA +AVK G T++GVRGKD V + +KK KL D +V + + + + G+TADAR ++ +AR E R + V+ + ++IA Q YTQ RP G+ A+++ D + PRL++ DP+G + KA + G + FLEK ++ Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKK-GSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDE 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.661e-28 Identity = 64/177 (36.16%), Postives = 106/177 (59.89%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKN 630 YDR IT+FSP+G LFQVEYA +AV+ G+ ++GV+GKDS+ +KK KL D + ++ + +++ L + G++ADAR +V A+ E FR Y + VD+L +++A Q TQ + RP GV ++ +E P+L+K +P+G A + G ++ + F+EK ++ Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVRK-GLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNENGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQD 178
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7_CICAR (Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.661e-28 Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK 627 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D SV + + ++ L G+ ADAR L+ +AR E R + V+ + ++IA Q YTQ +RP G+ +++ D G P L++ DP+G F KA + G FLEK K Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDNVVLGVEKKSTAKLQDTRSVRKIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNFK 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.951e-28 Identity = 67/178 (37.64%), Postives = 103/178 (57.87%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR IT+FSP+G LFQVEYA +A+K G T++GVRG+D V + +KK KL D +V + + + + G+TADAR ++ +AR E R + V+ + ++IA Q YTQ RP G+ A+++ D + PRL++ DP+G + KA + G + FLEK ++ Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAIKK-GSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDE 179 The following BLAST results are available for this feature:
BLAST of FC920548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920548 ID=FC920548; Name=FC920548; organism=Citrus clementina; type=EST; length=722bpback to top |