FC920548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.951e-28 Identity = 68/178 (38.20%), Postives = 103/178 (57.87%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR IT+FSP+G LFQVEYA +AVK G T++GVRG+D V + +KK KL D +V + + + + G+TADAR ++ +AR E R + V+ + ++IA Q YTQ RP G+ A+++ D + PRL++ DP+G + KA + G + FLEK ++ Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKK-GSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDE 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.951e-28 Identity = 68/173 (39.31%), Postives = 102/173 (58.96%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 618 YDR IT+FSP+G LFQVEYA +AVK G T++GVRGK+ V + +KK KL D +V + + + + + G+TADAR ++ +AR E R + V+ + ++IA Q YTQ RP G+ A+++ D + PRL++ DP+G + KA + G + FLEK Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKK-GSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEK 174
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.951e-28 Identity = 68/173 (39.31%), Postives = 102/173 (58.96%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 618 YDR IT+FSP+G LFQVEYA +AVK G T++GVRGK+ V + +KK KL D +V + + + + + G+TADAR ++ +AR E R + V+ + ++IA Q YTQ RP G+ A+++ D + PRL++ DP+G + KA + G + FLEK Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKK-GSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEK 174
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27 Identity = 66/178 (37.08%), Postives = 105/178 (58.99%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR ITIFSP+G LFQVEYA +AVK G T++GVRGKD + + +KK L D ++ + I ++ L G++ADAR LV +AR E ++ + V ++++IA+ Q +TQ RP G+ ++ D + PRLFK +P+G ++ + A + G E+ +LE++ + Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKK-GSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEE 180
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27 Identity = 66/178 (37.08%), Postives = 103/178 (57.87%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR IT+FSP+G LFQVEYA +AVK G T++G+RG + V + +KK KL D +V + + ++ + G+TADAR ++ +AR E + + V+ + ++IA Q YTQ RP G+ A+++ D++ PRL++ DP+G + KA + G + FLEK D Sbjct: 5 YDRAITVFSPDGHLFQVEYAQEAVKK-GSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTED 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27 Identity = 66/178 (37.08%), Postives = 103/178 (57.87%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR IT+FSP+G LFQVEYA +AVK G T++G+RG + V + +KK KL D +V + + ++ + G+TADAR ++ +AR E + + V+ + ++IA Q YTQ RP G+ A+++ D++ PRL++ DP+G + KA + G + FLEK D Sbjct: 5 YDRAITVFSPDGHLFQVEYAQEAVKK-GSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTED 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7_RAT (Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.356e-27 Identity = 70/184 (38.04%), Postives = 105/184 (57.07%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLL------ATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR IT+FSP+G LFQVEYA +AVK G T++GVRG+D V + +KK KL D +V + + + + +G+TADAR ++ +AR E R G + V+ + ++IA Q YTQ RP G+ A+++ D + PRL++ DP+G + KA + G + FLEK +D Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKK-GSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAVVASVSGLTADARIVINRARVECQSHRLTVGDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDD 185
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA3_DICDI (Proteasome subunit alpha type-3 OS=Dictyostelium discoideum GN=psmA3 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.356e-27 Identity = 67/176 (38.07%), Postives = 106/176 (60.23%), Query Frame = 1 Query: 91 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 618 G GYD +++ +SP+G+LFQV+YA KAV+ +G T + ++ KD V + +K VP K+L S + I ++G+ G ADAR L+ +AR EA ++ YG +P+ VL++ IA + ++T + +RP G + ID + GP+LF +P+G G+ S G +Q A N LEK Sbjct: 5 GSGYDLYVSTYSPDGKLFQVDYANKAVENSG-TLVAIKAKDGVVLGVEKLVPSKMLCSGSNRRVHHIDTHVGVAIAGFLADARQLITRARSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLYGSVRPFGCSIAITGID-QYGPQLFLVEPSGSCVGYFGASLGKGKQAAKNELEK 178
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.771e-27 Identity = 68/177 (38.42%), Postives = 98/177 (55.37%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK 627 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D SV + + ++ L G+ ADAR L+ +AR E R + V+ + ++IA Q YTQ +RP G+ +++ D P L++ DP+G F KA + G FLEK K Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.771e-27 Identity = 68/177 (38.42%), Postives = 98/177 (55.37%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK 627 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D SV + + ++ L G+ ADAR L+ +AR E R + V+ + ++IA Q YTQ +RP G+ +++ D P L++ DP+G F KA + G FLEK K Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK 179 The following BLAST results are available for this feature:
BLAST of FC920548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920548 ID=FC920548; Name=FC920548; organism=Citrus clementina; type=EST; length=722bpback to top |