FC920548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA3_DROME (Proteasome subunit alpha type-3 OS=Drosophila melanogaster GN=Prosalpha7 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.771e-27 Identity = 66/176 (37.50%), Postives = 106/176 (60.23%), Query Frame = 1 Query: 91 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 618 G GYD + FSP+GR+FQ++YA KAV+ +G T IG+RGKD+V + +K + KL + + +F I K +G+ G+ AD + AR EAA +R ++ +P+ L +A YT ++ +RP G+ ++ S DE GP+L+K +P+G FG+ A ++G +Q A +EK Sbjct: 5 GTGYDLSASQFSPDGRVFQIDYASKAVEKSG-TVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSIILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEK 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.771e-27 Identity = 68/178 (38.20%), Postives = 112/178 (62.92%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 Y +T FSP G+L Q+E+A +A A+G ++IG++ K+ V ++T+KK+ L+D TSV + IT+ +GL+ GM D+R L+++AR E+ ++ +Y ++PV L + +A Q +TQ +RP GV +V DE+ GP L++ DP+G +F KAT+ G + FLEK+ +D Sbjct: 5 YSFSLTTFSPSGKLVQIEHALQAA-ASGGSAIGIKAKNGVVLITEKKL-HSLVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEK-GPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDD 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7B_ARATH (Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.313e-27 Identity = 67/177 (37.85%), Postives = 97/177 (54.80%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK 627 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D S + + ++ L G+ ADAR L+ +AR E R + V+ + ++IA Q YTQ +RP G+ +++ D P L++ DP+G F KA + G FLEK K Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYK 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.313e-27 Identity = 67/177 (37.85%), Postives = 97/177 (54.80%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK 627 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D S + + ++ L G+ ADAR L+ +AR E R + V+ + ++IA Q YTQ +RP G+ +++ D P L++ DP+G F KA + G FLEK K Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYK 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.021e-27 Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 97 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 GY +T FSP G+L Q+EYA AV AAG S+G++ + V + T+KK L D S + PITK++G++ +GM D R LV++AR A ++ Y +P L + +A Q YTQ +RP GV ++ DE P LF+ DP+G +F KAT+ G FLEK+ D Sbjct: 5 GYSFSLTTFSPSGKLVQIEYALAAV-AAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEG-RPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNED 181
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA3_MOUSE (Proteasome subunit alpha type-3 OS=Mus musculus GN=Psma3 PE=1 SV=3) HSP 1 Score: 121.709 bits (304), Expect = 3.946e-27 Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 1 Query: 91 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 618 G GYD + FSP+GR+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G+ ADAR+L AR EA+ FR +GY +P+ LA +A YT ++ +RP G M+ S G +L+ DP+G +G+ + G Q A +EK Sbjct: 5 GTGYDLSASTFSPDGRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEK 179
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27 Identity = 69/178 (38.76%), Postives = 102/178 (57.30%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 633 YDR ITIFSP+GRL+QVEYA +AVK G SIGVR + V + K+ L++ TSV + ++G+ + G ADAR L+ AR+++ R +YG + ++ L K + D Q YTQ RP GV ++ + E PRL++ DP+G + KA S G + LE+ ++D Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKR-GTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKIHKADDHIGIASAGHVADARQLIDFARHQSQVNRLRYGEPIGIETLTKEVTDHIQQYTQVGGARPFGVALLIGGV-ENGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRDD 185
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSJ (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica GN=Os08g0548900 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27 Identity = 67/178 (37.64%), Postives = 99/178 (55.62%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEEC-GPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKN 630 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D S+ + + ++ L G+ ADAR L+ +AR E R + V+ + ++IA Q YTQ +RP G+ +++ D P L++ DP+G F KA + G FLEK K+ Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKD 180
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSI (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica GN=OsI_029135 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27 Identity = 67/178 (37.64%), Postives = 99/178 (55.62%), Query Frame = 1 Query: 100 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEEC-GPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKN 630 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D S+ + + ++ L G+ ADAR L+ +AR E R + V+ + ++IA Q YTQ +RP G+ +++ D P L++ DP+G F KA + G FLEK K+ Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKD 180
BLAST of FC920548 vs. ExPASy Swiss-Prot
Match: PSA3_RAT (Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27 Identity = 69/176 (39.20%), Postives = 101/176 (57.39%), Query Frame = 1 Query: 91 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 618 G GYD + FSP+GR+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G+ ADAR+L AR EA+ FR +GY +P+ LA +A YT ++ +RP G M+ S G +L+ DP+G +G+ + G Q A +EK Sbjct: 5 GTGYDLSASTFSPDGRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEK 179 The following BLAST results are available for this feature:
BLAST of FC920548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920548 ID=FC920548; Name=FC920548; organism=Citrus clementina; type=EST; length=722bpback to top |