FC920549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920549 vs. ExPASy Swiss-Prot
Match: P4HA2_HUMAN (Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13 Identity = 50/186 (26.88%), Postives = 87/186 (46.77%), Query Frame = 3 Query: 150 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRCEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFF 695 +I P K + P Y ++D E + + +AK +L R+ V D +G ++ R S +++ + D ++A + ++ T L + E +QV G +YEPH+D+ D + G+R+AT L Y+SDV GG TVFP+ G A+ P++G A+ ++ Sbjct: 323 LIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPDL---------------------GAAIWPKKGTAVFWY 487
BLAST of FC920549 vs. ExPASy Swiss-Prot
Match: P4HA3_RAT (Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11 Identity = 47/149 (31.54%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 150 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLS-DVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKEN--GEDIQVLRCEHGQKYEPHYDYF---SDKVNIVRGGHRLATVLMYLSDVAKGGETVF 578 ++ P++ + I +P +Y F++D E + LA+ L+RS VA SGE +L + R S ++ D ++ ++ +IA T L + E +QV+ G YEPH+D+ S + ++ G+R AT+++YLS V GG T F Sbjct: 333 LLQPARKEVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVA---SGEKQLQVEYRISKSAWLKDTVDPVLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYKMKSGNRAATLMIYLSSVEAGGATAF 478
BLAST of FC920549 vs. ExPASy Swiss-Prot
Match: P4HA3_MOUSE (Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.855e-11 Identity = 46/149 (30.87%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 150 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLS-DVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKEN--GEDIQVLRCEHGQKYEPHYDYF---SDKVNIVRGGHRLATVLMYLSDVAKGGETVF 578 ++ P++ + + +P +Y F++D E + LA+ L+RS VA SGE +L + R S ++ D ++ ++ +IA T L + E +QV+ G YEPH+D+ S + ++ G+R+AT ++YLS V GG T F Sbjct: 331 LLQPARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVA---SGEKQLQVEYRISKSAWLKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAF 476
BLAST of FC920549 vs. ExPASy Swiss-Prot
Match: P4HA3_BOVIN (Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.855e-11 Identity = 47/149 (31.54%), Postives = 78/149 (52.35%), Query Frame = 3 Query: 150 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLS-DVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKEN--GEDIQVLRCEHGQKYEPHYDYF---SDKVNIVRGGHRLATVLMYLSDVAKGGETVF 578 ++ P + + I +P +Y F++D E + LA+ L+RS VA SGE +L + R S ++ D ++ ++ +IA T L + E +QV+ G YEPH+D+ S + + G+R+AT ++YLS V GG T F Sbjct: 333 LLQPVRKEVIHLEPYVVLYHDFVSDAEAQTIRGLAEPWLQRSVVA---SGEKQLPVEYRISKSAWLKDTVDPVLVTLDHRIAALTGLDVQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMNSGNRVATFMIYLSSVEAGGATAF 478 The following BLAST results are available for this feature:
BLAST of FC920549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920549 ID=FC920549; Name=FC920549; organism=Citrus clementina; type=EST; length=695bpback to top |