FC920559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: GCP4_ARATH (Gamma-tubulin complex component 4 homolog OS=Arabidopsis thaliana GN=At3g53760 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 47/216 (21.76%), Postives = 91/216 (42.13%), Query Frame = 1 Query: 70 IALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIKTSSDG-VDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQ--VHQG--------ARAFNASGTAISRSSL-----LCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQY 669 +A T A D ++ + + R + V K S G +L S+ G + +L Y V WP+ + +++ L+KY VF+ L K + +L +W +HQ N S + R + + M I +L Y+ +V+E W V+ + ++ E++ H +L + + L + + + ++ + LCLQ+ Sbjct: 450 LAATKTIAEEDKYFSRVSLRMPSFGVTVRSSQADMVRSKVSLTGKANLTSDTSVDGWDAIALEYSVDWPMQLFFTQEVLSKYLKVFQYLIRLKRTQMELEKSWASVMHQDHIESAQHRKDGLNGSTSQQRRQGIRPMWRVREHMAFLIRNLQFYIQVDVIESQWKVLQTHIHDSQDFTELVGFHQEYLSALISQSFLDIGSVSRILDSIMKLCLQF 665
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: GCP4_HUMAN (Gamma-tubulin complex component 4 OS=Homo sapiens GN=TUBGCP4 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 40/155 (25.81%), Postives = 73/155 (47.10%), Query Frame = 1 Query: 211 EQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAA 675 E P S G LSYKVQWPL I+ + L KY +VF+ L + V+ +L W + + ++ T + L M +++L +YL +VLE + + +++ + + + + HD FL L + + L + + + LC + + Sbjct: 444 EAPAS--GWAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQTDAIKWRLR-NHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFCS 595
BLAST of FC920559 vs. ExPASy Swiss-Prot
Match: GCP4_MOUSE (Gamma-tubulin complex component 4 OS=Mus musculus GN=Tubgcp4 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 37/149 (24.83%), Postives = 71/149 (47.65%), Query Frame = 1 Query: 229 TGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAA 675 +G LSYKVQWPL I+ + L KY +VF+ L + V+ +L W + + ++ T + L M +++L +YL +VLE + + +++ + + + + HD FL L + + L + + + LC + + Sbjct: 448 SGWAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQTDAVKWRLR-NHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFCS 595 The following BLAST results are available for this feature:
BLAST of FC920559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920559 ID=FC920559; Name=FC920559; organism=Citrus clementina; type=EST; length=707bpback to top |