FC920560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 2.912e-47 Identity = 88/142 (61.97%), Postives = 114/142 (80.28%), Query Frame = 1 Query: 229 KEVSAVEDAESQQETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 KE D E ++ G K H++++F+GHVDAGKST GG IL+L+G VD RT++KYE+EAKD R+ WY++++MDTN+EER GKT+EVG+A+FET+ R+TILDAPGHK YV MI GASQAD+G+LVISARKGE+ETGF Sbjct: 269 KEQEDEVDEEVVKDMFGG-KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETDKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGF 409
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3_SCHPO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Schizosaccharomyces pombe GN=sup35 PE=1 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 3.804e-47 Identity = 88/123 (71.54%), Postives = 106/123 (86.18%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 K H+N+VFIGHVDAGKST GG ILFL+G VD RT++K E+EAK+ +ESWY+++ +D+ EER KGKTVEVGRA+FETE RF++LDAPGHK YV NMI+GASQADIGVLVISAR+GEFE GF Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGF 358
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3_CANAL (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida albicans GN=SUP35 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.804e-47 Identity = 83/123 (67.48%), Postives = 107/123 (86.99%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 K H++++F+GHVDAGKST GG IL+L+G VD RT++KYE+EAKD R+ WY++++MDTN+EER GKT+EVG+A+FET+ R+TILDAPGHK YV MI GASQAD+G+LVISARKGE+ETGF Sbjct: 290 KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVEKYEREAKDAGRQGWYLSWVMDTNKEERNDGKTIEVGKAYFETDKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGF 412
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: ERF3_PICPI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Pichia pinus GN=SUP2 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.492e-46 Identity = 81/123 (65.85%), Postives = 106/123 (86.18%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 K H++++F+GHVDAGKST GG +LFL+G VD RT++KYE+EAKD R+ WY+++IMDTN+EER GKT+EVG+++FET+ R+TILDAPGHK Y+ MI GASQAD+GVLVIS+RKGE+E GF Sbjct: 316 KDHMSIIFMGHVDAGKSTMGGNLLFLTGAVDKRTVEKYEREAKDAGRQGWYLSWIMDTNKEERNDGKTIEVGKSYFETDKRRYTILDAPGHKLYISEMIGGASQADVGVLVISSRKGEYEAGF 438
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.697e-35 Identity = 71/149 (47.65%), Postives = 102/149 (68.46%), Query Frame = 1 Query: 208 PEPKVKHKEVSAVEDAESQQETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 P P K ++ D +++ E K+ LN+V IGHVDAGKST G +L+L G V+ RT+ KYE+E+K + S+ A+++D EER +G T++VG FET+T T++DAPGHK ++PNMI+GA+QAD+ VLV+ A +GEFE GF Sbjct: 234 PTPVKKSGKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGF 382
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34 Identity = 70/149 (46.98%), Postives = 101/149 (67.79%), Query Frame = 1 Query: 208 PEPKVKHKEVSAVEDAESQQETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 P P K ++ D +++ E K+ LN+V IGHVDAGKST G +L+L G ++ RT+ KYE+E+K + S+ A+++D EER +G T++VG FET T T++DAPGHK ++PNMI+GA+QAD+ VLV+ A +GEFE GF Sbjct: 232 PAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGF 380
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34 Identity = 71/149 (47.65%), Postives = 101/149 (67.79%), Query Frame = 1 Query: 208 PEPKVKHKEVSAVEDAESQQETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 P P K ++ D +++ E K+ LN+V IGHVDAGKST G +L+L G V+ RT+ KYE+E+K + S+ A+++D EER +G T++VG FET T T++DAPGHK ++PNMI+GA+QAD+ VLV+ A +GEFE GF Sbjct: 230 PTPVRKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGF 378
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34 Identity = 70/149 (46.98%), Postives = 101/149 (67.79%), Query Frame = 1 Query: 208 PEPKVKHKEVSAVEDAESQQETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 P P K ++ D +++ E K+ LN+V IGHVDAGKST G +L+L G ++ RT+ KYE+E+K + S+ A+++D EER +G T++VG FET T T++DAPGHK ++PNMI+GA+QAD+ VLV+ A +GEFE GF Sbjct: 232 PAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGF 380
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.823e-34 Identity = 71/149 (47.65%), Postives = 100/149 (67.11%), Query Frame = 1 Query: 208 PEPKVKHKEVSAVEDAESQQETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 P P K ++ D ++ E K+ LN+V IGHVDAGKST G +L+L G V+ RT+ KYE+E+K + S+ A+++D EER +G T++VG FET T T++DAPGHK ++PNMI+GA+QAD+ VLV+ A +GEFE GF Sbjct: 227 PTPLRKSGKLRQQIDVKAGLEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGF 375
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.833e-33 Identity = 67/122 (54.92%), Postives = 93/122 (76.23%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 K HLN+V IGH+D GKST G++L+ G VD R IQ+YE+EAK RE+W A+++D +EER KG T+++G FET+ FT++DAPGH+ +V NMI+GASQAD+ +LV+SA++GEFE G Sbjct: 5 KPHLNLVVIGHIDHGKSTLMGRLLYEIGAVDPRLIQQYEEEAKKMGRETWKYAWVLDKLKEEREKGITIDLGFYKFETKKYFFTLIDAPGHRDFVKNMITGASQADVALLVVSAKEGEFEAG 126 The following BLAST results are available for this feature:
BLAST of FC920560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920560 ID=FC920560; Name=FC920560; organism=Citrus clementina; type=EST; length=654bpback to top |