FC920560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_DICDI (Elongation factor 1-alpha OS=Dictyostelium discoideum GN=eef1a1 PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.313e-31 Identity = 63/125 (50.40%), Postives = 88/125 (70.40%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K H+N+V IGHVDAGKSTT G +++ G +D R I+KYEKEA + ++S+ A++MD + ER +G T+++ FET FTI+DAPGH+ ++ NMI+G SQAD VLVI++ GEFE G Sbjct: 2 GKEKTHINIVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKYEKEASEMGKQSFKYAWVMDKLKAERERGITIDIALWKFETSKYYFTIIDAPGHRDFIKNMITGTSQADCAVLVIASPTGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.715e-31 Identity = 68/124 (54.84%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 280 NNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 + K HLN+V IGHVD GKST G IL+ G VD +TIQ E+EAK + +ES+ A+++D +EER +G T+ + FET FTI+DAPGH+ +V NMI+GASQAD +LV+SARKGEFE G Sbjct: 3 SGKPHLNLVVIGHVDHGKSTLVGHILYRLGLVDQKTIQMLEEEAKKRGKESFKFAWLLDKLKEERERGVTIALTYMKFETRRYIFTIIDAPGHRDFVKNMITGASQADAALLVVSARKGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.926e-31 Identity = 65/122 (53.28%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 K H+N+V IGHVD GKST G +L+ G VD++TI+ E+EAK K +ES+ A+++D +EER +G T+++ FET+ FTI+DAPGH+ +V NMI+GASQAD +LV+SAR+GEFE G Sbjct: 5 KPHINLVVIGHVDHGKSTLVGHLLYRLGFVDEKTIKMLEEEAKKKGKESFKYAWLLDRLKEERERGVTIDLTFVKFETKKYYFTIIDAPGHRDFVKNMITGASQADAAILVVSARRGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.821e-31 Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 K HLN+V IGHVD GKST G IL+ G D++T++ E+E+K +ES+ A+++D +EER +G T+ + FET+ FTI+DAPGH+ +V NMI+GASQAD +LV+SARKGEFE G Sbjct: 6 KPHLNIVIIGHVDHGKSTMTGHILYRLGYFDEKTVKMIEEESKKMGKESFKFAWLLDRMKEERERGVTISLSYMKFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAG 127
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A1_EUPCR (Elongation factor 1-alpha 1 OS=Euplotes crassus GN=EFA1 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.452e-30 Identity = 59/125 (47.20%), Postives = 89/125 (71.20%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K HLN+V IGHVD+GKSTT G +++ G +D RTI+K+EKE+ + + S+ A+++D + ER +G T+++ FETE +TI+DAPGH+ ++ NMI+G SQAD +L+I++ GEFE G Sbjct: 2 GKEKEHLNLVVIGHVDSGKSTTTGHLIYKLGGIDARTIEKFEKESAEMGKASFKYAWVLDKLKAERERGITIDIALWKFETENRHYTIIDAPGHRDFIKNMITGTSQADAAILIIASGTGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_ABSGL (Elongation factor 1-alpha OS=Absidia glauca GN=TEF-1 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.477e-30 Identity = 60/125 (48.00%), Postives = 88/125 (70.40%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K H+NVV IGHVD+GKSTT G +++ G +D RTI+K+EKEA + + S+ A+++D + ER +G T+++ FET T++DAPGH+ ++ NMI+G SQAD G+L+I+A GEFE G Sbjct: 2 GKEKTHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYHVTVIDAPGHRDFIKNMITGTSQADCGILIIAAGTGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_ENTHI (Elongation factor 1-alpha OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.225e-30 Identity = 57/122 (46.72%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 K H+N+V IGHVD+GKSTT G +++ G +D RTI+K+EKE+ + + S+ A+++D + ER +G T+++ FET FTI+DAPGH+ ++ NMI+G SQAD+ +L+++A GEFE G Sbjct: 5 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDQRTIEKFEKESAEMGKGSFKYAWVLDNLKAERERGITIDISLWKFETSKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVAAGTGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.225e-30 Identity = 61/122 (50.00%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 K H+N+V IGHVD GKST G +L+ G ++++ +++ E++AK + +ES+ A+I+D +EER +G T+++ FET+ FTI+DAPGH+ +V NMI+GASQAD +LV+SARKGEFE G Sbjct: 4 KPHMNLVVIGHVDHGKSTLVGHLLYRLGYIEEKKLKELEEQAKSRGKESFKFAWILDKMKEERERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAG 125
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1AC_PORPU (Elongation factor 1-alpha C OS=Porphyra purpurea GN=TEF-C PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.225e-30 Identity = 58/125 (46.40%), Postives = 90/125 (72.00%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K+H+++V IGHVD+GKSTT G +++ G +D R I+K+EKEA + + S+ A+++D + ER +G T+++ FET+ FTI+DAPGH+ ++ NMI+G SQAD+ +LVI++ GEFE G Sbjct: 2 GKEKQHVSIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETDKYNFTIIDAPGHRDFIKNMITGTSQADLAILVIASPPGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_BOMMO (Elongation factor 1-alpha OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.518e-30 Identity = 59/125 (47.20%), Postives = 88/125 (70.40%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K H+N+V IGHVD+GKSTT G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G Sbjct: 2 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 126 The following BLAST results are available for this feature:
BLAST of FC920560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920560 ID=FC920560; Name=FC920560; organism=Citrus clementina; type=EST; length=654bpback to top |