FC920560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EFTU_THEEB (Elongation factor Tu OS=Thermosynechococcus elongatus (strain BP-1) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 40/117 (34.19%), Postives = 57/117 (48.72%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 636 K H+NV IGHVD GK+T I +KY++ +D EE+ +G T+ +ETE + +D PGH YV NMI+GA+Q D +LV++A G Sbjct: 10 KPHVNVGTIGHVDHGKTTLTAAITMTLAAQGKAQARKYDE---------------IDAAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDG 111
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EFTU_THEAB (Elongation factor Tu OS=Thermosipho africanus (strain TCF52B) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 41/121 (33.88%), Postives = 61/121 (50.41%), Query Frame = 1 Query: 283 NKRHLNVVFIGHVDAGKSTTGGQI---LFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 636 +K HLNV IGH+D GK+T I L G+ D ++ +K ++K R G T+ + +ETET + +D PGH Y+ NMI+GA+Q D +LV++A G Sbjct: 9 SKPHLNVGTIGHIDHGKTTLTAAITKYLSFFGRADYTPYEQIDKAPEEKER------------------GITINISHIEYETETRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDG 111
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS9 (Elongation factor Tu OS=Synechococcus sp. (strain CC9902) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 41/118 (34.75%), Postives = 57/118 (48.31%), Query Frame = 1 Query: 283 NKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 636 NK H+N+ IGHVD GK+T I + + +Q Y +D EER +G T+ +ETE + +D PGH YV NMI+GA+Q D +LV +A G Sbjct: 9 NKPHVNIGTIGHVDHGKTTLTAAITNVLAKKGQAQVQNYAD---------------IDGAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDG 111
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJB (Elongation factor Tu OS=Synechococcus sp. GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 39/117 (33.33%), Postives = 58/117 (49.57%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 636 K H+NV IGHVD GK+T I + T ++Y++ +D EE+ +G T+ ++T + +D PGH YV NMI+GA+Q D +LV+SA G Sbjct: 10 KPHVNVGTIGHVDHGKTTLTAAITTTLAALGQATAKRYDE---------------IDAAPEEKARGITINTAHVEYQTANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG 111
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EFTU_STRZT (Elongation factor Tu OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 265 QETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 636 +E +K H+N+ IGHVD GK+T I + R + + KD + +D EER +G T+ +ETE + +DAPGH YV NMI+GA+Q D +LV+++ G Sbjct: 3 KEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLA----RRLPSSVNQPKDYAS--------IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDG 114
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EFTU_STRZP (Elongation factor Tu OS=Streptococcus pneumoniae (strain P1031) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 265 QETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 636 +E +K H+N+ IGHVD GK+T I + R + + KD + +D EER +G T+ +ETE + +DAPGH YV NMI+GA+Q D +LV+++ G Sbjct: 3 KEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLA----RRLPSSVNQPKDYAS--------IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDG 114
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EFTU_STRZJ (Elongation factor Tu OS=Streptococcus pneumoniae (strain JJA) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 265 QETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 636 +E +K H+N+ IGHVD GK+T I + R + + KD + +D EER +G T+ +ETE + +DAPGH YV NMI+GA+Q D +LV+++ G Sbjct: 3 KEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLA----RRLPSSVNQPKDYAS--------IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDG 114
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EFTU_STRSY (Elongation factor Tu OS=Streptococcus suis (strain 05ZYH33) GN=tuf PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 265 QETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 636 +E +K H+N+ IGHVD GK+T I + R + + KD + +D EER +G T+ +ETE + +DAPGH YV NMI+GA+Q D +LV+++ G Sbjct: 3 KEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLA----RRLPSSVNQPKDYAS--------IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDG 114
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EFTU_STRS2 (Elongation factor Tu OS=Streptococcus suis (strain 98HAH33) GN=tuf PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 265 QETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 636 +E +K H+N+ IGHVD GK+T I + R + + KD + +D EER +G T+ +ETE + +DAPGH YV NMI+GA+Q D +LV+++ G Sbjct: 3 KEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLA----RRLPSSVNQPKDYAS--------IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDG 114
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EFTU_STRR6 (Elongation factor Tu OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12 Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 265 QETEGNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 636 +E +K H+N+ IGHVD GK+T I + R + + KD + +D EER +G T+ +ETE + +DAPGH YV NMI+GA+Q D +LV+++ G Sbjct: 3 KEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLA----RRLPSSVNQPKDYAS--------IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDG 114 The following BLAST results are available for this feature:
BLAST of FC920560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920560 ID=FC920560; Name=FC920560; organism=Citrus clementina; type=EST; length=654bpback to top |