FC920560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_ONCVO (Elongation factor 1-alpha OS=Onchocerca volvulus PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.101e-29 Identity = 58/125 (46.40%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K H+N+V IGHVD+GKSTT G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G +++ FET TI+DAPGH+ ++ NMI+G SQAD VLV++ GEFE G Sbjct: 2 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGIQIDIALWKFETPKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_NEUCR (Elongation factor 1-alpha OS=Neurospora crassa GN=tef-1 PE=3 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 6.101e-29 Identity = 58/123 (47.15%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 283 NKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 +K H+NVV IGHVD+GKSTT G +++ G +D RTI+K+EKEA + + S+ A+++D + ER +G T+++ FET T++DAPGH+ ++ NMI+G SQAD +L+I+A GEFE G Sbjct: 5 DKTHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAG 127
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_ASPOR (Elongation factor 1-alpha OS=Aspergillus oryzae GN=tef1 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.101e-29 Identity = 55/123 (44.72%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 283 NKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 +K+H+N+V IGHVD+GKSTT G +++ G +D RTI+K+EKEA + + S+ A+++D + ER +G T+++ F+T T++DAPGH+ ++ NMI+G SQAD +L+I++ GEFE G Sbjct: 5 DKQHINIVVIGHVDSGKSTTTGHLIYKCGGIDQRTIEKFEKEAAELGKGSFKYAWVLDKLKSERERGITIDIALWKFQTSKYEVTVIDAPGHRDFIKNMITGTSQADCAILIIASGTGEFEAG 127
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A3_OSCTI (Elongation factor 1-alpha 3 OS=Oscheius tipulae GN=eft-3 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.101e-29 Identity = 58/123 (47.15%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 283 NKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 +K H+N+V IGHVD+GKSTT G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VLV++ GEFE G Sbjct: 5 DKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKFYVTIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAG 127
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.968e-29 Identity = 59/120 (49.17%), Postives = 87/120 (72.50%), Query Frame = 1 Query: 280 NNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGE 639 + K H+N+V IGHVD GKST G++LF G++ I +Y+KEA++K + ++ A++MD +EER +G T+++ FET+ FTI+DAPGH+ +V NMI+G SQAD VLV+SAR+GE Sbjct: 3 SEKPHMNLVIIGHVDHGKSTLVGRLLFEHGEIPQHIIDEYKKEAEEKGKATFEFAWVMDRFKEERERGVTIDLTHRKFETDKYYFTIIDAPGHRDFVKNMITGTSQADAAVLVVSAREGE 122
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A3_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 7.968e-29 Identity = 58/125 (46.40%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K H+N+V IGHVD+GKSTT G +++ G +D RTI+K+EKEA + + S+ A+++D + ER +G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++ GEFE G Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETGKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAGGVGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A2_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis GN=eef1ao PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.968e-29 Identity = 58/125 (46.40%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K H+N+V IGHVD+GKSTT G +++ G +D RTI+K+EKEA + + S+ A+++D + ER +G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++ GEFE G Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETGKFYITIIDAPGHRDFIKNMITGTSQADCAVLIVAGGVGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A1_OSCTI (Elongation factor 1-alpha 1 OS=Oscheius tipulae GN=eft-1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.968e-29 Identity = 58/125 (46.40%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K H+N+V IGHVD+GKSTT G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G T+++ FET TI+DAPGH+ ++ MI+G SQAD VLV++ GEFE G Sbjct: 2 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKFYVTIIDAPGHRDFIKKMITGTSQADCAVLVVACGTGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_METS5 (Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=tuf PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.041e-28 Identity = 62/124 (50.00%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 280 NNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 + K HLN++ IGHVD GKST G++L G +D++TI++ E+ AK +ES A+++D +EER +G T+ + FET+ FTI+DAPGH+ +V NMI+GASQAD +L +SARKGEFE+G Sbjct: 2 SQKPHLNLIVIGHVDHGKSTLVGRLLMDRGFLDEKTIKEAEEAAKKLGKESEKYAFLLDRLKEERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILAVSARKGEFESG 125
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A1_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.041e-28 Identity = 57/125 (45.60%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K H+NVV IGHVD+GKSTT G +++ G +D RTI+++EKEA + + S+ A+++D + ER +G T+++ FET T++DAPGH+ ++ NMI+G SQAD +L+I+ GEFE G Sbjct: 2 GKEKTHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEEFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAG 126 The following BLAST results are available for this feature:
BLAST of FC920560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920560 ID=FC920560; Name=FC920560; organism=Citrus clementina; type=EST; length=654bpback to top |