FC920560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_SCHCO (Elongation factor 1-alpha OS=Schizophyllum commune GN=TEF1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.359e-28 Identity = 58/125 (46.40%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K H+NVV IGHVD+GKSTT G +++ G +D RTI+K+EKEA + + S+ A+++D + ER +G T+++ FET T++DAPGH+ ++ NMI+G SQAD +L I+ GEFE G Sbjct: 2 GKEKLHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYMVTVIDAPGHRDFIKNMITGTSQADCAILTIAGGTGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_YARLI (Elongation factor 1-alpha OS=Yarrowia lipolytica GN=TEF PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.775e-28 Identity = 57/125 (45.60%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K H+N+V IGHVDAGKSTT G +++ G +D RTI+K+EKEA + + S+ A+++D + ER +G T+++ F+T T++DAPGH+ ++ NMI+G SQAD +L+I+ GEFE G Sbjct: 2 GKEKTHVNLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEADELGKGSFKYAWVLDKLKAERERGITIDIALWKFQTPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 1.775e-28 Identity = 59/124 (47.58%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 280 NNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 + K HLN++ IGH+D GKST G++L G +D++T+++ E+ AK +ES A+++D +EER +G T+ + FET+ FTI+DAPGH+ +V NMI+GASQAD +LV+SA+KGE+E G Sbjct: 2 SQKPHLNLIVIGHIDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAG 125
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_PLAFK (Elongation factor 1-alpha OS=Plasmodium falciparum (isolate K1 / Thailand) GN=MEF-1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.775e-28 Identity = 58/126 (46.03%), Postives = 87/126 (69.05%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGF 654 G K H+N+V IGHVD+GKSTT G I++ G +D RTI+K+EKE+ + + S+ A+++D + ER +G T+++ FET FT++DAPGHK ++ NMI+G SQAD+ +LV+ A G F+ F Sbjct: 2 GKEKTHINLVVIGHVDSGKSTTTGHIIYKLGGIDRRTIEKFEKESAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETPRYFFTVIDAPGHKDFIKNMITGTSQADVALLVVPADVGGFDGAF 127
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.318e-28 Identity = 58/120 (48.33%), Postives = 86/120 (71.67%), Query Frame = 1 Query: 280 NNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGE 639 + K HLN++ IGHVD GKST G++LF G++ I++Y KEA+ K + ++ A++MD +EER +G T+++ FET+ FT++DAPGH+ +V NMI+G SQAD +LVISAR+GE Sbjct: 3 SQKPHLNLITIGHVDHGKSTLVGRLLFEHGEIPAHIIEEYRKEAEQKGKATFEFAWVMDRFKEERERGVTIDLAHRKFETDKYYFTLIDAPGHRDFVKNMITGTSQADAAILVISAREGE 122
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.318e-28 Identity = 61/124 (49.19%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 280 NNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 + K HLN++ IGHVD GKST G++L G +D++TI++ E+ AK +ES A+++D +EER +G T+ + FET+ FTI+DAPGH+ +V NMI+GASQAD +LV+SA+KGE+E G Sbjct: 2 SQKPHLNLIVIGHVDHGKSTLVGRLLMDRGFLDEKTIKEAEEAAKKLGKESEKYAFLLDRLKEERERGVTINLTFMRFETKKFFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAG 125
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.318e-28 Identity = 59/124 (47.58%), Postives = 88/124 (70.97%), Query Frame = 1 Query: 280 NNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 + K HLN++ IGHVD GKST G++L G +D++T+++ E+ AK ++S A++MD +EER +G T+ + FET FT++DAPGH+ +V NMI+GASQAD +LV+SA+KGE+E G Sbjct: 2 SQKPHLNLIVIGHVDHGKSTLIGRLLMDRGFIDEKTVKEAEEAAKKLGKDSEKYAFLMDRLKEERERGVTINLSFMRFETRKYFFTVIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAG 125
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_PIRIN (Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.954e-28 Identity = 57/125 (45.60%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 277 GNNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 G K H+NVV IGHVD+GKSTT G +++ G +D RTI+K+EKEA + + S+ A+++D + ER +G T+++ ET T++DAPGH+ ++ NMI+G SQAD +L+I+ GEFE G Sbjct: 2 GKEKAHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKSETPKYMVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAG 126
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.954e-28 Identity = 63/122 (51.64%), Postives = 82/122 (67.21%), Query Frame = 1 Query: 286 KRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 651 K HLN+ IGHVD GKST G++L +G VD++ + E EAK +E + A+IMD +EER +G T+E FET FTI+D PGH+ +V NMI GASQAD +LV+SAR GEFE+G Sbjct: 14 KPHLNLAIIGHVDHGKSTLTGRLLLETGYVDEKAFAELEAEAKKLGKEDFKYAWIMDRLKEERERGVTIEAMHVGFETPKYFFTIIDLPGHRDFVKNMIVGASQADAALLVVSARPGEFESG 135
BLAST of FC920560 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.165e-28 Identity = 57/120 (47.50%), Postives = 86/120 (71.67%), Query Frame = 1 Query: 280 NNKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGE 639 + K HLN++ IGHVD GKST G++L+ G++ I++Y KEA+ K + ++ A++MD +EER +G T+++ FET+ FT++DAPGH+ +V NMI+G SQAD +LVISAR+GE Sbjct: 3 SQKPHLNLITIGHVDHGKSTLVGRLLYEHGEIPAHIIEEYRKEAEQKGKATFEFAWVMDRFKEERERGVTIDLAHRKFETDKYYFTLIDAPGHRDFVKNMITGTSQADAAILVISAREGE 122 The following BLAST results are available for this feature:
BLAST of FC920560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920560 ID=FC920560; Name=FC920560; organism=Citrus clementina; type=EST; length=654bpback to top |