FC920561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_METB6 (Translation initiation factor 6 OS=Methanoregula boonei (strain 6A8) GN=eif6 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23 Identity = 65/195 (33.33%), Postives = 98/195 (50.26%), Query Frame = 3 Query: 153 FENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVND 737 F +GVF+++ ++ E F + L + ++ T+I G+ IIG L GN GL++ TD+EL L+ V + E ++A GN I ND A H DL E E I LGVEV T+ G G +N+G +VHP + +++ L T+ +P+ GT+N GS ++G GL VND Sbjct: 7 FAGDPNIGVFARVAGNIAVIPPEAPEEFRNAIREGLG--VELLVTTIQGSAIIGSLVAGNSRGLVVSGLATDEELAVLKKHRK----VMLLCETMNAAGNVIMANDTFAAVHPDLPAEVAEEIGAFLGVEVIHLTLGGVRTTGMAGVATNKGVIVHPRATAQEIARLETVSGIPVGTGTINMGSGLVGTGLLVND 195
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_METBF (Translation initiation factor 6 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=eif6 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.130e-23 Identity = 65/188 (34.57%), Postives = 100/188 (53.19%), Query Frame = 3 Query: 171 VGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVN 734 +GVF+ T LV G + E L +V+T + G+ +IG L GN NG L + T E++ L V + + +L+A+GN + ND AL H +L + E+IA L VEV+R T+AG VG +N+G LVHP + +++ L L ++P+ GT N G++M+G+GL N Sbjct: 13 IGVFATCTEDVVLVPTGTKPETCAILEDSLD--ARIVETLVNGSVVIGALSRGNSNGFLYSYGTDAGEMKELTG-----VEAEILPGKLNAVGNIVLANDSAALVHPELSDKAIEVIASTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEIETLEKLFELPVNIGTTNFGTQMLGSGLLAN 193
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_METBU (Translation initiation factor 6 OS=Methanococcoides burtonii (strain DSM 6242) GN=eif6 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23 Identity = 64/188 (34.04%), Postives = 101/188 (53.72%), Query Frame = 3 Query: 171 VGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVN 734 +GVF+ T +V IG + +L + V+ T I G+ ++G L GN NG L+ +L+ + +V V+ + + L+A+GN I ND AL H ++ + E+I+ VLGV+V R T+AG VG +NRG LVHP + ++L L + +P+ GT N GS+ +G+GL N Sbjct: 13 LGVFATCTEDVAIVPIGTAGKAIDLLAEQLD--VKVISTLINGSIVVGSLSKGNSNGFLISRDANVSDLKDV------EVPVEVLPDMLTAVGNVILANDTAALVHPEMTDSSIEVISRVLGVDVHRGTIAGLGTVGMAGVVTNRGLLVHPMVTPDELSVLEDVFALPIELGTTNYGSQAVGSGLLAN 192
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_METKA (Translation initiation factor 6 OS=Methanopyrus kandleri GN=eif6 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.046e-22 Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 270 IPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVN 734 + VV+T++ G+ ++G L N NG L P + E++ +R V V + +++A+GN + NDH AL H DLD E+I VLG V R + G VGS +++G +VHP + E+++ +S +L V + GTVNRGS +G G+ VN Sbjct: 45 VEVVRTTVAGSNLVGALLAVNSNGALFPRHAREHEIRVVREL---GVEVDVLPSKMNAVGNLVLTNDHGALVHPDLDDHALEVIESVLGGRVVRGELGGVKTVGSAGVANSKGAVVHPGATEEEMERVSEVLGVDVEVGTVNRGSPYVGVGIVVN 196
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_HYPBU (Translation initiation factor 6 OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=eif6 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.330e-22 Identity = 70/190 (36.84%), Postives = 98/190 (51.58%), Query Frame = 3 Query: 171 VGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNI-LVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVND 737 +GV+ N LV +E E L + V++T I I G + GN NGLLLP +EL +LR + D+V ++ +E R +ALGN IA N+ AL +D+ + I VLGVE Q NI VGS +NRGG+VHP S +++ L+++ V TVN G + AGL ND Sbjct: 13 IGVYIYANNKIALVPPTLTEKDKKKIEETLG--VEVIETKIADMIINGVMIAGNDNGLLLPRIVKPEELDYLREHIGDKVRLEILEVRQTALGNLIAANNRGALVSPLIDKAILDKIKSVLGVETIYQRHLANIPTVGSMIVVTNRGGVVHPGVSDDEIRILNSVFGVEFTTATVNFGLYFVKAGLVAND 200
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_METTH (Translation initiation factor 6 OS=Methanobacterium thermoautotrophicum GN=eif6 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.190e-22 Identity = 67/200 (33.50%), Postives = 105/200 (52.50%), Query Frame = 3 Query: 135 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVN 734 M R+ + +GV+ +T++ L+ E F L + V+K SI G+ + G L VGN NG ++ + D+E+ L + + V RI ER +A+GN + ND+ A+A L + ++I DVL V+V T+AG +VGS + +NRG L++P S E++ + L V GTVN G +IGA N Sbjct: 1 MIRRINLSGNPNLGVYISVTDSVALIPQNTPEKFEGVLREALE--VEVLKVSISGSSLNGALAVGNSNGFVVSNQAMDREIDALAAAGVEAV---RIPERFTAVGNLVLANDNGAVASPLLSDDALQVIGDVLEVDVKVSTLAGLNIVGSMGAATNRGALLNPQASSEEIGIIEDTLGVEADVGTVNHGVTLIGACSVAN 195
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_SULSO (Translation initiation factor 6 OS=Sulfolobus solfataricus GN=eif6 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.156e-21 Identity = 70/201 (34.83%), Postives = 109/201 (54.23%), Query Frame = 3 Query: 144 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVE-VFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVND 737 RL + +GV+ N + ++ G S + +A V+ +++ I + ++G GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE + R +A I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND Sbjct: 5 RLSVFGTDNIGVYIYTNNKYTIIPRG----LDSETKENIAQVLGTELLEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEILNSKVTALGNTILANNKAALIYPEFNDIEEKIIKETLGVEDIKRGKIAQMITVGSVGVITNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIKSGLVAND 200
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_SULIY (Translation initiation factor 6 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.510e-21 Identity = 69/201 (34.33%), Postives = 108/201 (53.73%), Query Frame = 3 Query: 144 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVND 737 RL + +GV+ N + +V G S + + ++ +++ I + ++G GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE R+ +A I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVAND 200
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_SULIN (Translation initiation factor 6 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eif6 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.510e-21 Identity = 69/201 (34.33%), Postives = 108/201 (53.73%), Query Frame = 3 Query: 144 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVND 737 RL + +GV+ N + +V G S + + ++ +++ I + ++G GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE R+ +A I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVAND 200
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_SULIL (Translation initiation factor 6 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.510e-21 Identity = 69/201 (34.33%), Postives = 108/201 (53.73%), Query Frame = 3 Query: 144 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVND 737 RL + +GV+ N + +V G S + + ++ +++ I + ++G GN NG+LLP +T D E + L+ +L D V+ + +++ALGN I N+ AL + + + E+II + LGVE R+ +A I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL ND Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVAND 200 The following BLAST results are available for this feature:
BLAST of FC920561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920561 ID=FC920561; Name=FC920561; organism=Citrus clementina; type=EST; length=739bpback to top |