FC920561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_HALS3 (Translation initiation factor 6 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eif6 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.371e-19 Identity = 58/198 (29.29%), Postives = 96/198 (48.48%), Query Frame = 3 Query: 144 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVND 737 R F S +GVF++ T + LV + F + EL +P V+T++GG+ +G L GN +GLL+ + ++E + + V V + ++A GN + ND A H+ L + + + L V R +AG VG+ + G L HP + +L+ + L V GTVN G+ ++G+GL D Sbjct: 3 RAAFRGSAYIGVFARATESCVLVRPDLDDDFVDSIADELG--VPAVQTTVGGSSTVGSLAAGNSSGLLVSNRIRERERDRIEAA---GVTVGELPGAVNAAGNVVVANDDGAYVHSGLSDDAVAAVEETLDVSATRGQLAGVDTVGTAAVATTDGVLCHPKATDAELERIEETLGVYADVGTVNYGAPLVGSGLVAAD 195
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_METMJ (Translation initiation factor 6 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=eif6 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.014e-19 Identity = 61/188 (32.45%), Postives = 95/188 (50.53%), Query Frame = 3 Query: 171 VGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVN 734 +GV++++ +V G F + EL + +V T I G+ IIG L GN GL++ TD+EL L + V ++ ++A GN I ND VA H ++ + E I L V V R T+ G VG +N+G LVHP + ++ L ++ +P+ G+VN GS ++G GL N Sbjct: 13 IGVYARVFEDIAIVYPGAPAEFTAALARELD--VEIVSTFIQGSSIIGSLVSGNSQGLVVSGLATDEELA----VLSEYRDVFLLKGPMNAAGNIILANDCVAAVHPEMQIDVAEEIGSFLEVPVVRLTLGGIKTVGMAGFATNKGILVHPRANDTEIANLERIVDLPIGLGSVNMGSGLVGTGLLAN 194
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_CENSY (Translation initiation factor 6 OS=Cenarchaeum symbiosum GN=eif6 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.161e-19 Identity = 50/150 (33.33%), Postives = 84/150 (56.00%), Query Frame = 3 Query: 285 TSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVN 734 TS+ R++G L V N +G+++P T ++ E + + VVV ++ + +ALGN I+ ND + RE IIAD LG+EV ++ +AG VG+ ++ GG++HP T ED+ +S ++ V + T+N G + +GL N Sbjct: 50 TSVANTRLMGTLMVLNNSGIIMPSTISEIEYEFYKKHTDLNVVV--LDTKFTALGNMISVNDRGGVVSPVFPREEVRIIADALGIEVIQRRIAGYNQVGAMMVATSGGGIIHPETDGEDVKRISEVMGVHMEPATINGGIPFVSSGLLAN 197
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_METJA (Translation initiation factor 6 OS=Methanocaldococcus jannaschii GN=eif6 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.196e-18 Identity = 68/206 (33.01%), Postives = 110/206 (53.40%), Query Frame = 3 Query: 135 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPV--VKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVA-GTVNRGSEMIGAGLTVN 734 M R F +GV + T L+ I + + E+++V+ ++T+IGG+ ++G L V NK GLLLP D+EL ++N L + + V+ I+ + +ALGN I ND AL +L ++ ++ I D L VEV T+A VGS +N+G L HP ++L+ L +L +V + GT N+G+ +GA + N Sbjct: 3 MIIRKYFSGIPTIGVLALTTEEITLLPIFLDKDDVN----EVSEVLETKCLQTNIGGSSLVGSLSVANKYGLLLPKIVEDEELDRIKNFLKENNLDLNVEIIKSKNTALGNLILTNDKGALISPEL-KDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGCLTHPLVEDDELEFLKSLFKVEYIGKGTANKGTTSVGACIIAN 203
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_HALLT (Translation initiation factor 6 OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=eif6 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.196e-18 Identity = 61/198 (30.81%), Postives = 94/198 (47.47%), Query Frame = 3 Query: 144 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVND 737 R F S VGVF++ + LV E EL + T++GG +G L GN+NG+L+ T++E + + +V + ++A GN + ND+ A H DL RE+ I + LGV V R + VG+ +N G L HP ++ +L + L V GT+N G+ +IG+GL D Sbjct: 3 RATFTGSSYVGVFARAIDDLLLVRPDVDEELADALGEELG--AEPLLTTVGGANTVGSLATGNENGVLVSARATEREQSRIAEAADCEV--GELPGEINAAGNVVLANDYGAYVHPDLPRESIVTIRETLGVPVVRGDLGDVRTVGTAAVANNTGVLCHPKSTESELQAVEEALDVRADLGTINYGAPLIGSGLIATD 196
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_THEPD (Translation initiation factor 6 OS=Thermofilum pendens (strain Hrk 5) GN=eif6 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18 Identity = 56/188 (29.79%), Postives = 91/188 (48.40%), Query Frame = 3 Query: 171 VGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVN 734 +GV+ + F L+ E L+ + + S+ G R++G GN NGL++P D EL+HL++ L +VV + R + +GN + ND+ +A L + + IAD LGVE + ++ VGS +NRG + P + E++ + L+V TVNRG + GL N Sbjct: 15 IGVYIFANDRFALIPYDAPEKLDRKIAENLS--VDAFRVSVAGTRLVGIFLAGNNNGLVVPRVILDSELEHLKSLLDVNIVVLE-DVRETGIGNLVLANDNGCVASQILPKSAVDRIADALGVECIQMSIGDVPFVGSLSVATNRGVALPPLATEEEIKSVEEALKVKANVLTVNRGKMFLRTGLVAN 199
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_PYRAE (Translation initiation factor 6 OS=Pyrobaculum aerophilum GN=eif6 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18 Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 3 Query: 276 VVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVND 737 V + ++ + ++G V N NG+LLP ++E++ L +L V + I + +A+ N I + VAL L+ +++ADVLGVEV T+AGN LVG+ ++RG LV P + +DL +LS +V + GTVNRG + G+ VND Sbjct: 48 VARFTVARSPLLGIFTVVNDNGVLLPPLVLEEEVR-LFKALGLNVDI--INTKYTAISNLILAGNKVALVSPLLEPSARKVVADVLGVEVIVDTIAGNPLVGALAVLNSRGLLVAPEATDDDLKKLSEYFKVRVDVGTVNRGKSFLRGGIVVND 198
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_THEVO (Translation initiation factor 6 OS=Thermoplasma volcanium GN=eif6 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18 Identity = 58/202 (28.71%), Postives = 102/202 (50.50%), Query Frame = 3 Query: 129 VIMATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVN 734 VI T +M S +G+++K + + E + F L + + + SI G+ +IG + N NG++LP+ + L + D V ++++++A+GN I NDH A+ H + + I D LGVE R ++ + VGS +++G LV+P T ++L+ L +V + +GT N GS +GA + N Sbjct: 3 VIRKTSVM--RSSFIGIYAKAWDDVAFITKMADEKTVNEFREVLQ--VDIKRISIDGSTLIGTMIAVNSNGIVLPYGSNIDGLDGI-----DGRNVLYLKDKINAVGNDIIANDHGAIIHKAFSNKARKEIEDTLGVETIRTSIGNILTVGSASVLTSKGMLVNPETDDDELEFLKDFFKVSVKSGTANFGSIYVGASIVAN 195
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_UNCMA (Translation initiation factor 6 OS=Uncultured methanogenic archaeon RC-I GN=eif6 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18 Identity = 55/150 (36.67%), Postives = 82/150 (54.67%), Query Frame = 3 Query: 276 VVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGL 725 VV+T I + +IG + GN NG ++ T D+E N L + V R++ +++A GN I ND AL H L + E I L VEV R T+ G VG +N+G LVHP + E+L L L ++P+ GTV+ GS ++G+ + Sbjct: 46 VVRTLINESTLIGSMMTGNSNGFIVSDLTLDREA----NLLQEHGKVTRLKGKMTAAGNLILANDTAALVHPALTDKNIEAIEKTLKVEVRRGTIGGLKTVGMAGCATNKGILVHPRATEEELTVLEDLFKLPVDIGTVSFGSPLVGSAI 191
BLAST of FC920561 vs. ExPASy Swiss-Prot
Match: IF6_PYRAR (Translation initiation factor 6 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=eif6 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18 Identity = 55/154 (35.71%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 276 VVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEMIGAGLTVND 737 V + ++ + ++G V N NG+LLP ++E++ L +L V V + + +A+ N I + VAL L+ +++ADVLGVEV T+AGN LVGS ++RG LV P + EDL +L+ + GTVN+G + G+ VND Sbjct: 48 VARLTVAKSPLLGIFTVVNDNGVLLPPMVLEEEIR-LFKALGLNVEV--LNTKYTAISNLILAGNKVALVSPLLEPSVRKVVADVLGVEVIVDTIAGNPLVGSLAVLNSRGVLVAPEATDEDLKKLAEYFKAKTDLGTVNKGKSFLRGGIVVND 198 The following BLAST results are available for this feature:
BLAST of FC920561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920561 ID=FC920561; Name=FC920561; organism=Citrus clementina; type=EST; length=739bpback to top |