FC920564

Overview
NameFC920564
Unique NameFC920564
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.416e-42
Identity = 93/180 (51.67%), Postives = 115/180 (63.89%), Query Frame = 2
Query:  116 PNPKNPIVFFDVTIGTIPAGR-----IKMELFADIAPKTAENFRQFCTGEYRKG--GLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 634
            P P NPIV+ D+  G+ PA R     I +EL+AD  P+TAENFR  CT   +    G P+ ++   FHRVI  FMIQ GDF + DG+G  SIYG KF DE+   KH  P LLSMAN+G N+NG QFFIT      LD KHVVFGRVL  G  VVR++E+V T  ++RPK    I +CGE+
Sbjct:    8 PKPGNPIVYLDLAFGSSPASRPGSNRIVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVL-KGKGVVRRVESVETVASDRPKEDVKIVDCGEL 186          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.849e-42
Identity = 91/170 (53.53%), Postives = 109/170 (64.12%), Query Frame = 2
Query:  131 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEY----RKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECG 628
            P  FFD++IG  PAGRI  EL++D+ PKTAENF + C G       K  +P+ YKG  FHRVIK FM Q GDF   +G+G  SIYG KF+DENF  KH  P LLSMAN+G N+NG Q FITC     LD KHVVFG V+  G  +VR IEN AT   ++P     I +CG
Sbjct:    6 PKTFFDISIGGKPAGRIVFELYSDVVPKTAENFLKLCEGNSGFAKSKPDIPLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVI-QGKRLVRTIENNATDEADKPAKEVKIEDCG 174          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.849e-42
Identity = 93/166 (56.02%), Postives = 111/166 (66.87%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 634
            V+FD+  G    GRI + L+    P+TAENFR   TGE  KG    GY+G  FHRVIKDFMIQ GDF +GDG+G  SIYG KF DENF  +HT  GLLSMAN+G ++NG QFFIT A   WLD KHVVFG VL +G  +V KI+NV  G N+RP     I + GE+
Sbjct:   36 VYFDIQHGDESLGRIVLGLYGKTVPETAENFRALATGE--KG---FGYEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVL-EGYDIVDKIQNVPKGRNDRPLKDVKIVKSGEL 195          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.849e-42
Identity = 90/166 (54.22%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 634
            V+FD+  G  P GR+ + L+    PKTAENFR   TGE  KG    GY+G  FHRVIK+FMIQ GDF +GDG+G  SIYG KF DENF  +HT  GLLSMAN+G ++NG QFFIT     WLD +HVVFG VL +G  VV  IENV   P ++P+    I + GE+
Sbjct:   22 VYFDIEHGNKPLGRVVLGLYGKTVPKTAENFRALATGE--KG---FGYEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVL-EGYEVVEAIENVPKVPGDKPQQVVKIVKSGEL 181          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.415e-42
Identity = 93/166 (56.02%), Postives = 111/166 (66.87%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 634
            V+FD+     P GRI M L+    PKTAENFR   TGE  KG    GY+G  FHRVIKDFMIQ GDF  GDG+G  SIYG+KF+DENF  +HT  G+LSMAN+G ++NG QFFIT A   WLD KHVVFG VL +G  +V KI+ V  G  +RP     I +CGE+
Sbjct:   37 VYFDIEHDGQPLGRIVMGLYGKTVPKTAENFRALATGE--KG---FGYEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVL-EGYDIVDKIQVVPKGFQDRPTKDVKIVKCGEL 196          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.153e-42
Identity = 93/168 (55.36%), Postives = 110/168 (65.48%), Query Frame = 2
Query:  131 PIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 634
            P VFFD+       GRI MEL AD+ PKTAENFR  CTGE  KG    GYKG  FHRVI  FM Q GDF + +G+G  SIYG KF DENF  KHT PG+LSMAN+G N+NG QFFI  A   WLD KHVVFG V   GL +++K+E+  +      K   TIA+CG++
Sbjct:    4 PQVFFDLQANGENLGRIVMELRADVVPKTAENFRALCTGE--KG---FGYKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAVT-QGLDIIKKVESYGSDSGKTSK-KITIADCGQL 164          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.119e-42
Identity = 91/166 (54.82%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 634
            V+FDV+      G+I  +L+ D+ PKTAENFR  CTGE  KG    GYKG  FHRVI  FM+Q GDF   +G+G  SIYG KF DENF+ +H  PGLLSMAN+GPN+NG QFFIT   C WLD KHVVFG V  DGL +V+KIE+  +G     K    I E G++
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGE--KG---FGYKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVT-DGLDIVKKIESFGSGSGATSK-KIVIEESGQL 162          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPID_ASHGO (Peptidyl-prolyl cis-trans isomerase D OS=Ashbya gossypii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.379e-42
Identity = 91/167 (54.49%), Postives = 110/167 (65.87%), Query Frame = 2
Query:  140 FFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEY----RKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECG 628
            +FD++IG  PAGR+  E+++D+ PKTAENF + C G+      K G+P+ Y+G  FHRVIK FM Q GDF  GDG+G  SIYG KF+DENF  KH  P LLSMAN+GPN+NG Q FITCA    LD KHVVFG V+  G  VVR IE   T   +RP     I  CG
Sbjct:    8 YFDLSIGGKPAGRVVFEVYSDVTPKTAENFVRLCAGDAGECRTKPGVPLCYQGSLFHRVIKGFMCQFGDFTNGDGTGGESIYGEKFEDENFARKHDRPFLLSMANAGPNTNGSQCFITCAPTPHLDGKHVVFGEVI-QGKRVVRAIERQETAA-DRPLADVRIDACG 172          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.025e-42
Identity = 88/164 (53.66%), Postives = 106/164 (64.63%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECG 628
            ++FD+  G    GRI   L+    PKTAENF+Q  TG+        GYKG  FHRVI  FMIQ GDF   DG+G  SIYG +F DENF  +HT PGLLSMAN+GP+SNG QFFIT     WLD KHVVFG+VL +G+ VV KIE   T   ++P +   IA+CG
Sbjct:   36 IYFDIKQGEESLGRIVFGLYGKTVPKTAENFKQLATGQNG-----YGYKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVL-EGMDVVTKIEKTPTNYRSKPNVDVVIADCG 193          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.025e-42
Identity = 88/151 (58.28%), Postives = 106/151 (70.20%), Query Frame = 2
Query:  185 MELFADIAPKTAENFRQFCTGEYRKGGL-PVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 634
            MELF D+ P+TAENFR  CTGE   G   P+ YKG  FHRVI  FM Q GDF  G+G+G  SIYG KF DENFI KHTGPG+LSMAN+GP +NG QFFI   K  WLD KHVVFG+V+ +G+ VVR IE V +  + + K    IA+CG++
Sbjct:    1 MELFQDVVPQTAENFRALCTGEKGMGDRKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVV-EGMDVVRAIEKVGS-QSGQTKKPVKIADCGQL 149          
The following BLAST results are available for this feature:
BLAST of FC920564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
PPID_USTMA1.416e-4251.67Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]
PPID_KLULA1.849e-4253.53Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
PPIB_EMENI1.849e-4256.02Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIB_ASPOR1.849e-4254.22Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_ARTBE2.415e-4256.02Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
PPIA_HEMPU3.153e-4255.36Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
PPIA_CANAL4.119e-4254.82Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPID_ASHGO5.379e-4254.49Peptidyl-prolyl cis-trans isomerase D OS=Ashbya go... [more]
PPIB2_RHIOR7.025e-4253.66Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
CYPH_ALLCE7.025e-4258.28Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]

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Properties
Property NameValue
Genbank descriptionC32010A06EF RVDevelop1 Citrus clementina cDNA clone C32010A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920564 ID=FC920564; Name=FC920564; organism=Citrus clementina; type=EST; length=697bp
GGAGAGTCCGAAGTCGAAGCCCTCAGTAGCTTGTAGAGTTAAGGAAGTGC
GAGAGAAATTGATGGCATCCGGAGGAGGAGGAGGAGGAGGAAGTGTGGAG
TGGCACGTGCGGCCTCCAAACCCAAAAAACCCAATCGTATTTTTCGATGT
CACAATCGGTACCATCCCCGCTGGTCGAATCAAGATGGAGCTCTTCGCCG
ACATCGCCCCTAAAACCGCCGAAAATTTTAGGCAGTTCTGCACCGGCGAG
TACAGAAAGGGAGGATTGCCTGTTGGTTACAAGGGATGCCAGTTCCATAG
GGTGATCAAGGATTTTATGATTCAAGCTGGTGATTTTCTGAAGGGTGATG
GTAGTGGATGTACTTCAATTTATGGACATAAGTTTGATGATGAAAATTTT
ATTGCTAAACACACTGGTCCAGGTCTATTATCTATGGCAAACAGCGGACC
AAATTCTAATGGGTGCCAGTTCTTTATCACTTGTGCAAAATGTGATTGGC
TTGACAATAAGCACGTTGTATTTGGGAGGGTGCTTGGAGATGGTCTTTTG
GTTGTCAGGAAGATCGAGAATGTGGCCACCGGACCCAACAACCGGCCTAA
ACTGGCATGCACTATCGCAGAATGTGGAGAAATGTGAAACTGATAACTTG
AAAACAATTGTGGCATTGCTAAGGACTGATAAAAAAGAAATATCCGT
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