FC920564

Overview
NameFC920564
Unique NameFC920564
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CYPB_YEAST (Peptidyl-prolyl cis-trans isomerase B OS=Saccharomyces cerevisiae GN=CPR2 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.876e-35
Identity = 82/166 (49.40%), Postives = 103/166 (62.05%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCA-KCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGE 631
            VFFD+  G    GRI + L+  + PKTA+NF +  T    K G    + G  FHRVI +FM+Q GDF  G G G  SIYG  F DENF  KH   G LSMAN G ++NG QFFIT   +  WLD KHVVFG+V+ DG+ VV  I++V+   N++P  A  IA+CGE
Sbjct:   38 VFFDIEHGEEKVGRIVIGLYGKVCPKTAKNFYKLSTTTNSKKG----FIGSTFHRVIPNFMVQGGDFTDGTGVGGKSIYGDTFPDENFTLKHDRKGRLSMANRGKDTNGSQFFITTTEEASWLDGKHVVFGQVV-DGMDVVNYIQHVSRDANDKPLEAVKIAKCGE 198          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.369e-35
Identity = 84/165 (50.91%), Postives = 100/165 (60.61%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPK-LACTIAECG 628
            V+FDV       GRI M+L  DI PKTA+NFR  C  E  KG    GYKG  FHR+I  FM+Q GD+   +G+G  SIYG KF DENF  KHT  G+LSMAN G ++NG QFFIT  K  WLD KHVVFG V+ +G+ VV KI    +      K     I +CG
Sbjct:    9 VYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLC--ERPKGE---GYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVV-EGMDVVHKIAKYGSESGQVKKGYRIEIRDCG 167          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CYPR_DROME (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Drosophila melanogaster GN=ninaA PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 73/168 (43.45%), Postives = 98/168 (58.33%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDEN--FIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 634
            ++ DV     P GRI   LF  +APKT  NFR  C     +G     Y G +FHRV+  F++Q GD + GDG+G  SIYG  F DE+     +H  PG L MAN GP++NGCQF++T     WLD KH VFG+VL +G+  +  IE+V T  ++ P     I+ CGE+
Sbjct:   29 IYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICL----RGINGTSYVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKVL-EGMDTIYAIEDVKTDTDDFPVEPVVISNCGEI 191          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CYPR_CALVI (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Calliphora vicina GN=NINAA PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.569e-33
Identity = 75/166 (45.18%), Postives = 95/166 (57.23%), Query Frame = 2
Query:  137 VFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 634
            ++ DV     P GRI   LF   APKT  NFR  C     +G     Y G +FHRVI  F+IQ GD +  DG+G TSIYG  F DE    +H  PG L MAN GP++NGCQF++T     WL+ KH VFG+V+ +G+  V  IE+V T  ++ P     I  CGEM
Sbjct:   28 IYMDVKHQKKPLGRIVFGLFGKRAPKTVTNFRHICL----RGINGTTYVGSEFHRVISRFLIQGGDIVNNDGTGSTSIYGDFFQDEALDVEHLRPGYLGMANRGPDTNGCQFYVTTVAAQWLNGKHTVFGKVI-EGMDTVYAIEDVKTDTDDHPIDPVIIVNCGEM 188          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.676e-33
Identity = 78/163 (47.85%), Postives = 98/163 (60.12%), Query Frame = 2
Query:  140 FFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECG 628
            F D+ I    AGRI +EL  D+ PKT +NF           GL   YKG  FHRVI DFMIQ GDF   +G+G  SIYG +F+DENF  KH   G++SMAN+GPN+NG QFFIT  K +WLD +HVVFG++  D    V+ IE + +    RP     I + G
Sbjct:   26 FMDIEIDGESAGRIVLELRGDVVPKTVKNFI----------GLFDKYKGSTFHRVIADFMIQGGDFENHNGTGGHSIYGPRFEDENFTLKHDR-GVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKITNDSWPTVQAIEALGSS-GGRPSKIAKITDIG 176          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32
Identity = 71/171 (41.52%), Postives = 104/171 (60.82%), Query Frame = 2
Query:  125 KNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGE 631
            K+  VF D+ I + P GR+  EL+ D+ PKT +NF+  CTG+  + + G+ + YK   FHR++++  IQ GD + G G    SIYG  F+DENF   H   G+L MAN G +SNG QF+IT     +LD K V FG+++ +G  V++++E V T  N RP   C I + G+
Sbjct:  140 KHDFVFLDICIDSSPIGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLI-EGTEVLKQLELVPT-QNERPIHMCRITDSGD 308          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32
Identity = 70/172 (40.70%), Postives = 103/172 (59.88%), Query Frame = 2
Query:  125 KNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECGEM 634
            K+  VF D++I   P GR+  EL++D  PKT +NF+  CTG+  + + G+ + Y G  FHRV+++  +Q GD + G G    SIYG  F+DENF   H   G+L M N G +SNG QF+IT     +LD K+V FG+++ +G  V+  +E+V T  N RP   C I   G++
Sbjct:  136 KHNFVFLDISIDLYPIGRLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQLI-EGTDVLHHLESVPT-ENERPIQNCVITASGQL 305          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL1_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhizopus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.374e-29
Identity = 73/142 (51.41%), Postives = 90/142 (63.38%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNR 595
            G I +EL+ D AP+T +NF +     Y        Y G  FHR+I DFMIQ GD   G G G TSIYG +F DE N   +HTG G+LSMAN+GPN+NG QFFIT A   WLD KH +FGRV  DG+ VV+++  V T  N+R
Sbjct:   14 GSIHIELYWDHAPRTCKNFYELAKRGY--------YDGVSFHRIIADFMIQGGD-PTGTGRGGTSIYGERFADEINPGLQHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRV-SDGMNVVKRMGLVKTDANDR 145          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 74/152 (48.68%), Postives = 91/152 (59.87%), Query Frame = 2
Query:  146 DVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIA-KHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            DV + T   G   +EL+ + APKT +NF       Y        Y    FHR+IKDFMIQ GD   G G G +SIYG KF+DE     KHTG G+LSMAN+GPN+NG QFFIT A   WLD KH +FGRV   G+ V+R++  V T   +RP
Sbjct:    4 DVAVETT-MGTFTLELYTNHAPKTCKNFATLADRGY--------YDSTVFHRIIKDFMIQGGD-PTGTGRGGSSIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRV-KKGMGVIRRMGMVPTDKEDRP 144          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28
Identity = 71/143 (49.65%), Postives = 89/143 (62.24%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            G+I +EL+ + APKT +NF       Y        Y G  FHRVI DF+IQ GD   G G G TSIYG KFDDE +    HTG G+LSMAN+GPN+N  QFFIT A   WLD KH +FGRV+  GL V +++  + T  ++RP
Sbjct:   11 GKILIELYTEHAPKTCQNFYTLAKEGY--------YDGVIFHRVIPDFVIQGGD-PTGTGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVV-SGLSVCKRMGLIRTDSSDRP 143          
The following BLAST results are available for this feature:
BLAST of FC920564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
CYPB_YEAST4.876e-3549.40Peptidyl-prolyl cis-trans isomerase B OS=Saccharom... [more]
CYPH_ENCCU6.369e-3550.91Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]
CYPR_DROME1.201e-3343.45Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]
CYPR_CALVI1.569e-3345.18Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]
PPIA_NEOCA2.676e-3347.85Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]
PPIL6_HUMAN8.608e-3241.52Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
PPIL6_BOVIN8.608e-3240.70Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos ... [more]
PPIL1_RHIOR1.374e-2951.41Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhiz... [more]
PPIL1_NEUCR1.163e-2848.68Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIL1_SCHPO1.984e-2849.65Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionC32010A06EF RVDevelop1 Citrus clementina cDNA clone C32010A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920564 ID=FC920564; Name=FC920564; organism=Citrus clementina; type=EST; length=697bp
GGAGAGTCCGAAGTCGAAGCCCTCAGTAGCTTGTAGAGTTAAGGAAGTGC
GAGAGAAATTGATGGCATCCGGAGGAGGAGGAGGAGGAGGAAGTGTGGAG
TGGCACGTGCGGCCTCCAAACCCAAAAAACCCAATCGTATTTTTCGATGT
CACAATCGGTACCATCCCCGCTGGTCGAATCAAGATGGAGCTCTTCGCCG
ACATCGCCCCTAAAACCGCCGAAAATTTTAGGCAGTTCTGCACCGGCGAG
TACAGAAAGGGAGGATTGCCTGTTGGTTACAAGGGATGCCAGTTCCATAG
GGTGATCAAGGATTTTATGATTCAAGCTGGTGATTTTCTGAAGGGTGATG
GTAGTGGATGTACTTCAATTTATGGACATAAGTTTGATGATGAAAATTTT
ATTGCTAAACACACTGGTCCAGGTCTATTATCTATGGCAAACAGCGGACC
AAATTCTAATGGGTGCCAGTTCTTTATCACTTGTGCAAAATGTGATTGGC
TTGACAATAAGCACGTTGTATTTGGGAGGGTGCTTGGAGATGGTCTTTTG
GTTGTCAGGAAGATCGAGAATGTGGCCACCGGACCCAACAACCGGCCTAA
ACTGGCATGCACTATCGCAGAATGTGGAGAAATGTGAAACTGATAACTTG
AAAACAATTGTGGCATTGCTAAGGACTGATAAAAAAGAAATATCCGT
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