FC920564

Overview
NameFC920564
Unique NameFC920564
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.857e-26
Identity = 70/145 (48.28%), Postives = 87/145 (60.00%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGP-NNRPK 601
            G + +EL  D+ PKT ENF + C   Y        Y G  FHR I++F+IQ GD   G G+G  S +G  F DE      HTG G+LSMANSGPNSN  QFFIT   C +LD KH +FGRV+G G  V+  +ENV + P  +RPK
Sbjct:  289 GDLNLELHCDLTPKTCENFIRLCKKHY--------YDGTIFHRSIRNFVIQGGD-PTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVG-GFDVLTAMENVESDPKTDRPK 423          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.168e-26
Identity = 71/152 (46.71%), Postives = 90/152 (59.21%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGP-NNRPK---LACT 613
            G + +EL  D+ PKT ENF + C  +Y        Y G  FHR I++F+IQ GD   G G+G  S +G  F DE      HTG G+LSMANSGPN+N  QFFIT   C +LD KH +FGRV+G G   +  +ENV + P  +RPK   L CT
Sbjct:  289 GDLNLELHCDLTPKTCENFIKLCKKQY--------YDGTIFHRSIRNFVIQGGD-PTGTGTGGESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVG-GFDTLTAMENVESDPKTDRPKEEVLICT 430          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CYP7_YEAST (Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccharomyces cerevisiae GN=CPR7 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.138e-26
Identity = 77/195 (39.49%), Postives = 104/195 (53.33%), Query Frame = 2
Query:  125 KNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYR---KGGLPVGYKGCQFHRVIKDFMIQAGDFLKGD---------GSGCTSIYGHK--------------FDDENFIAKHTGPGLLSMANSG-PNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECG 628
            ++P+V+ D++I   P GRI  +LF + APKT ENF + C G+ +   K    + YKG  FHRV+K+FMIQAGD + G          G G  SIY  K              F+DEN + +   P  L MAN G PN+N  QFFIT      L+ KH +FG+V+  G  VVR IEN     +  P+    I++CG
Sbjct:    3 QDPLVYLDISIDKKPIGRIVCKLFREKAPKTTENFYKLCAGDVKSPLKDQQYLSYKGNGFHRVVKNFMIQAGDIVFGTQKDSSSSSVGKGGCSIYADKEEVKTDDESFCYGNFEDEN-LGEFVEPFTLGMANLGSPNTNNSQFFITTYAAPHLNGKHSIFGQVV-HGKSVVRTIENCRVDSDGVPESDVRISDCG 195          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL1_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Gibberella zeae GN=CYP1 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.058e-26
Identity = 65/143 (45.45%), Postives = 86/143 (60.14%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            G + +EL+   APKT  NF       Y        Y    FHR+I +FM+Q GD   G G G +SI+G KF+DE +   KHTG G+LSMAN+GPN+NG QFF+T A   WLD KH +FGRV   G+  ++++  V TG  +RP
Sbjct:   12 GSLILELYTTHAPKTCNNFTTLVRRGY--------YDNTIFHRIIPNFMVQGGD-PTGTGRGGSSIFGEKFEDEIDPGLKHTGAGILSMANAGPNTNGSQFFVTLAPTPWLDGKHTIFGRV-KSGMGTIKRMGLVKTGSEDRP 144          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CYP15_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus oryzae GN=cyp15 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.054e-25
Identity = 70/144 (48.61%), Postives = 82/144 (56.94%), Query Frame = 2
Query:  170 AGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            +G I M LF D APK  ENF       Y        Y    FHRVIK FMIQ G    GDG+G  SI+G  F+DE +   +H  P  +SMAN+GPN+NG QFFIT A   WLDNKH VFGRV   G+ VV  IE+      N+P
Sbjct:  485 SGDIHMRLFPDAAPKAVENFTTHAKNGY--------YDNLIFHRVIKGFMIQTGCPF-GDGTGGESIWGDDFEDEFSREFRHDRPYTVSMANAGPNTNGSQFFITVAPTTWLDNKHSVFGRVTA-GMDVVHSIESAKVDKTNKP 618          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25
Identity = 68/143 (47.55%), Postives = 88/143 (61.54%), Query Frame = 2
Query:  149 VTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENV 574
            VT+ T   G IK+E+F +  PKT ENF   C   Y        Y GC FHR IK FM+Q GD   G G G +SI+G KF+DE +   KH   G++SMAN+GPN+NG QFFIT  K   LD K+ VFG+V+ DGL  + ++E +
Sbjct:    3 VTLHT-DVGDIKIEVFCERTPKTCENFLALCASNY--------YNGCVFHRNIKGFMVQTGD-PTGTGRGGSSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVI-DGLETLDELEKL 134          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25
Identity = 68/143 (47.55%), Postives = 87/143 (60.84%), Query Frame = 2
Query:  149 VTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENV 574
            VT+ T   G IK+E+F +  PKT ENF   C   Y        Y GC FHR IK FM+Q GD   G G G  SI+G KF+DE +   KH   G++SMAN+GPN+NG QFFIT  K   LD K+ VFG+V+ DGL  + ++E +
Sbjct:    3 VTLHT-DVGDIKIEVFCERTPKTCENFLALCASNY--------YNGCIFHRNIKGFMVQTGD-PTGTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVI-DGLETLDELEKL 134          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CYP10_CAEEL (Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorhabditis elegans GN=cyn-10 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.803e-25
Identity = 70/151 (46.36%), Postives = 88/151 (58.28%), Query Frame = 2
Query:  149 VTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIA-KHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            VT+ T  +G IK+EL+ D APK  ENF   C  +Y        Y GC FHR IKDFM+Q GD     G G  SI+G  F+DE   A KH   G +SMAN+GP+SN  QFFIT AK   LD K+ +FG+V+ DG   + +IE +      RP
Sbjct:    3 VTLHTT-SGDIKIELYVDDAPKACENFLALCASDY--------YNGCIFHRNIKDFMVQTGDPTHS-GKGGESIWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVI-DGFDTLEEIETIKVDNKYRP 142          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24
Identity = 67/143 (46.85%), Postives = 87/143 (60.84%), Query Frame = 2
Query:  149 VTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENV 574
            VT+ T   G IK+E+F +  PKT ENF   C   Y        Y GC FHR IK FM+Q GD   G G G +SI+  KF+DE +   KH   G++SMAN+GPN+NG QFFIT  K   LD K+ VFG+V+ DGL  + ++E +
Sbjct:    3 VTLHT-DVGDIKIEVFCERTPKTCENFLALCASNY--------YNGCVFHRNIKGFMVQTGD-PTGTGRGGSSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVI-DGLETLDELEKL 134          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPWD1_BOVIN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Bos taurus GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.606e-24
Identity = 67/139 (48.20%), Postives = 80/139 (57.55%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGP 586
            G I ++LF    PKT ENF       Y        Y G  FHR+IK FMIQ GD   G G G  SI+G +F+DE +   +H  P  LSMAN+G N+NG QFFIT     WLDNKH VFGRV   G+ VV++I NV   P
Sbjct:  499 GDIHIKLFPVECPKTVENFCVHSRNGY--------YNGHTFHRIIKGFMIQTGD-PTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVT-KGMEVVQRISNVKVNP 627          
The following BLAST results are available for this feature:
BLAST of FC920564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
PPIL2_HUMAN1.857e-2648.28Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPIL2_MOUSE3.168e-2646.71Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
CYP7_YEAST4.138e-2639.49Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccha... [more]
PPIL1_GIBZE7.058e-2645.45Peptidyl-prolyl cis-trans isomerase-like 1 OS=Gibb... [more]
CYP15_RHIOR2.054e-2548.61Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizo... [more]
PPIL3_RAT2.682e-2547.55Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]
PPIL3_HUMAN4.575e-2547.55Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
CYP10_CAEEL7.803e-2546.36Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorha... [more]
PPIL3_MOUSE1.331e-2446.85Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPWD1_BOVIN6.606e-2448.20Peptidylprolyl isomerase domain and WD repeat-cont... [more]

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Properties
Property NameValue
Genbank descriptionC32010A06EF RVDevelop1 Citrus clementina cDNA clone C32010A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920564 ID=FC920564; Name=FC920564; organism=Citrus clementina; type=EST; length=697bp
GGAGAGTCCGAAGTCGAAGCCCTCAGTAGCTTGTAGAGTTAAGGAAGTGC
GAGAGAAATTGATGGCATCCGGAGGAGGAGGAGGAGGAGGAAGTGTGGAG
TGGCACGTGCGGCCTCCAAACCCAAAAAACCCAATCGTATTTTTCGATGT
CACAATCGGTACCATCCCCGCTGGTCGAATCAAGATGGAGCTCTTCGCCG
ACATCGCCCCTAAAACCGCCGAAAATTTTAGGCAGTTCTGCACCGGCGAG
TACAGAAAGGGAGGATTGCCTGTTGGTTACAAGGGATGCCAGTTCCATAG
GGTGATCAAGGATTTTATGATTCAAGCTGGTGATTTTCTGAAGGGTGATG
GTAGTGGATGTACTTCAATTTATGGACATAAGTTTGATGATGAAAATTTT
ATTGCTAAACACACTGGTCCAGGTCTATTATCTATGGCAAACAGCGGACC
AAATTCTAATGGGTGCCAGTTCTTTATCACTTGTGCAAAATGTGATTGGC
TTGACAATAAGCACGTTGTATTTGGGAGGGTGCTTGGAGATGGTCTTTTG
GTTGTCAGGAAGATCGAGAATGTGGCCACCGGACCCAACAACCGGCCTAA
ACTGGCATGCACTATCGCAGAATGTGGAGAAATGTGAAACTGATAACTTG
AAAACAATTGTGGCATTGCTAAGGACTGATAAAAAAGAAATATCCGT
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