FC920564
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPWD1_PONAB (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Pongo abelii GN=PPWD1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23 Identity = 67/139 (48.20%), Postives = 79/139 (56.83%), Query Frame = 2 Query: 173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGP 586 G I +LF PKT ENF Y Y G FHR+IK FMIQ GD G G G SI+G +F+DE + +H P LSMAN+G N+NG QFFIT WLDNKH VFGRV G+ VV++I NV P Sbjct: 501 GDIHTKLFPVECPKTVENFCVHSRNGY--------YNGHTFHRIIKGFMIQTGD-PTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVT-KGMEVVQRISNVKVNP 629
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPWD1_MOUSE (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Mus musculus GN=Ppwd1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23 Identity = 67/139 (48.20%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGP 586 G I ++LF PKT ENF Y Y G FHR+IK FMIQ GD G G G SI+G +F+DE + +H P LSMAN+G N+NG QFFIT WLDNKH VFGRV G+ VV++I NV P Sbjct: 501 GDIHIKLFPVECPKTVENFCVHSRNGY--------YNGHTFHRIIKGFMIQTGD-PTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRV-SKGMEVVQRIFNVKVNP 629
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPWD1_HUMAN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens GN=PPWD1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23 Identity = 67/139 (48.20%), Postives = 79/139 (56.83%), Query Frame = 2 Query: 173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGP 586 G I +LF PKT ENF Y Y G FHR+IK FMIQ GD G G G SI+G +F+DE + +H P LSMAN+G N+NG QFFIT WLDNKH VFGRV G+ VV++I NV P Sbjct: 501 GDIHTKLFPVECPKTVENFCVHSRNGY--------YNGHTFHRIIKGFMIQTGD-PTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVT-KGMEVVQRISNVKVNP 629
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL3_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus oryzae GN=cyp4 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.510e-23 Identity = 65/148 (43.92%), Postives = 80/148 (54.05%), Query Frame = 2 Query: 173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLK-----GDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598 G IK+E+F + PKTAENF C Y Y FHR I FMIQ + L G G G SI+G KF+DE KH G++SMANSGPN+NG QFFIT AK LD K+ VFG+V+ + +E V +RP Sbjct: 10 GDIKIEVFCEAVPKTAENFLALCASGY--------YDNNTFHRNIPGFMIQVHEHLHTGDPTGTGKGGNSIWGKKFNDEIRSTLKHNSRGIVSMANSGPNTNGSQFFITYAKHPHLDTKYTVFGKVIDGADSTLDMMEKVPVDEKHRP 149
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.279e-23 Identity = 64/143 (44.76%), Postives = 82/143 (57.34%), Query Frame = 2 Query: 173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598 G + +EL DIAP+ ENF C Y Y G FHR I++FMIQ GD G G G SI+G F DE N H+G G++SMANSGP++NG QFF+ L+ KH VFG V+G GL + +ENV ++RP Sbjct: 353 GDLNIELHCDIAPRACENFITLCERGY--------YNGVAFHRSIRNFMIQGGD-PTGTGKGGESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVG-GLATLAAMENVPVDESDRP 485
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: SDC10_XENLA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xenopus laevis GN=sdccag10 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23 Identity = 61/153 (39.87%), Postives = 86/153 (56.21%), Query Frame = 2 Query: 170 AGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP----KLACT 613 AG I +EL++ APK NF Q C Y Y FHRV+ +F+IQ GD G G+G S++G F DE + + GL++MAN+GP+ NG QFF T + D L+NKH +FG+V GD + + ++ V G + RP K+ CT Sbjct: 21 AGEIDIELWSKEAPKACRNFVQLCLEGY--------YDNTIFHRVVPEFIIQGGD-PTGTGTGGESVFGKPFRDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTGDTIYNILRLAEVDIGEDERPVNPHKIKCT 164
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CYP4_CAEEL (Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhabditis elegans GN=cyn-4 PE=2 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23 Identity = 62/136 (45.59%), Postives = 79/136 (58.09%), Query Frame = 2 Query: 173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIA--KHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLG--DGLLVVRKIE 568 G + +ELFA PK ENF C+ Y Y +FHR+IK+FM+Q GD G G G SI+ F DE FI+ H G+LSMAN G N+NG QFFIT C +LD KH +FGR++G D L + K+E Sbjct: 289 GPLNLELFAPKVPKACENFITHCSNGY--------YNNTKFHRLIKNFMLQGGD-PTGTGHGGESIWDKPFSDE-FISGFSHDARGVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKLE 414
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CYP9_SCHPO (Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosaccharomyces pombe GN=cyp9 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22 Identity = 65/143 (45.45%), Postives = 81/143 (56.64%), Query Frame = 2 Query: 173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598 G I ++L+ + APK +NF Y Y FHR+IK+FMIQ GD L GDG+G SI+ F+DE + KH P +SMANSGPN+NG QFFIT WLD KH +F R GL VV +IE T +RP Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHAENGY--------YDNTIFHRIIKNFMIQGGDPL-GDGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYA-GLDVVHRIEQGETDKYDRP 596
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: SDC10_DANRE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Danio rerio GN=sdccag10 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 58/144 (40.28%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 170 AGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598 AG I +EL++ PK NF Q C Y Y G FHR++ +F++Q GD G G+G SIYG F DE + + GL++MAN+GP+ NG QFF T + D L+NKH +FG+V GD + + ++ +VA + RP Sbjct: 21 AGDIDIELWSKETPKACRNFVQLCMEGY--------YDGTIFHRMVPEFIVQGGD-PTGTGTGGESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYNMLRLADVACDGDERP 155
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21 Identity = 60/153 (39.22%), Postives = 83/153 (54.25%), Query Frame = 2 Query: 170 AGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAEC 625 AG I +EL++ APK NF Q C Y Y FHRV+ F++Q GD G G+G SIYG F DE + + GL++MAN+GP+ NG QFF T + D L+NKH +FG+V GD + + ++ V RP+ + I C Sbjct: 21 AGDIDIELWSKEAPKACRNFIQLCLEAY--------YDNTIFHRVVPGFIVQGGD-PTGTGTGGESIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYNMLRLTEVDIDDEERPRNSHKIRSC 164 The following BLAST results are available for this feature:
BLAST of FC920564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920564 ID=FC920564; Name=FC920564; organism=Citrus clementina; type=EST; length=697bpback to top |