FC920564

Overview
NameFC920564
Unique NameFC920564
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 66/145 (45.52%), Postives = 77/145 (53.10%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIA-KHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKL 604
            G I +EL  D AP    NF Q     Y        Y+   FHR I  FMIQ GD   G G G  SI+G  F DE     KH   G++SMAN G N+NG QFFI       LDNKH +FGRV+G GL V+  +E V T  N+ PKL
Sbjct:  285 GEINIELHTDYAPHAVYNFVQLAKQGY--------YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVG-GLNVLDALEKVPTNSNDHPKL 419          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: SDC10_MOUSE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mus musculus GN=Sdccag10 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 60/153 (39.22%), Postives = 82/153 (53.59%), Query Frame = 2
Query:  170 AGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAEC 625
            AG I +EL++  APK   NF Q C   Y        Y    FHRV+  F++Q GD   G G+G  SIYG  F DE +   +    GL++MAN+GP+ NG QFF T  + D L+NKH +FG+V GD +  + ++  V      RP+    I  C
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY--------YDNTIFHRVVPGFIVQGGD-PTGTGTGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYNMLRLTEVDIDDEERPRNPHRIKSC 164          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: SDC10_RAT (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Rattus norvegicus GN=Sdccag10 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21
Identity = 59/153 (38.56%), Postives = 82/153 (53.59%), Query Frame = 2
Query:  170 AGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAEC 625
            AG I +EL++  APK   NF Q C   Y        Y    FHRV+  F++Q GD   G G+G  S+YG  F DE +   +    GL++MAN+GP+ NG QFF T  + D L+NKH +FG+V GD +  + ++  V      RP+    I  C
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY--------YDNTIFHRVVPGFIVQGGD-PTGTGTGGESVYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYNMLRLTEVDIDDEERPRNPHRIKSC 164          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL3_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibberella zeae GN=CYP10 PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21
Identity = 66/149 (44.30%), Postives = 80/149 (53.69%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDG----SGCTSIYGHKFDDENFIA-KHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGD-GLLVVRKIENVATGPNNRPK 601
            G IK+E++ +  PKTAENF   C   Y        Y    FHRVI  FM Q G     +      G  SI+G  F+DE   A +H   G+LSMAN GP +NG QFFIT  K   LD  + VFGRV+GD GL  + K+E V     NRPK
Sbjct:   10 GDIKVEIYCESVPKTAENFLALCGSGY--------YDKSPFHRVIPKFMAQTGAPATPNPPENPKGGRSIWGGAFEDEIRPALRHGARGVLSMANKGPGTNGSQFFITFDKAPHLDGLNTVFGRVIGDEGLATLAKMEAVEVDRKNRPK 150          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL3_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans GN=CYP10 PE=3 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21
Identity = 60/143 (41.96%), Postives = 80/143 (55.94%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            G IK+ELF +  P+TAENF   C            Y G  FHR I+ FMIQ GD   G G G  SI+G  F DE     +    G+++MAN+GP++N  QFFIT AK   LD K+ +FG+V+ DG+  +  +E     P +RP
Sbjct:   10 GDIKIELFCESVPRTAENFLALCASGQ--------YDGTLFHRNIRGFMIQGGD-PTGTGKGGQSIWGRPFSDEIRQTLRFNNRGMVAMANAGPDTNKSQFFITYAKQPSLDGKYSIFGKVI-DGMETLDSMEKTPVNPKSRP 142          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL2_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhizopus oryzae GN=cyp14 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21
Identity = 64/144 (44.44%), Postives = 79/144 (54.86%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPK 601
            G I +ELF+D  PKT  NF +     Y        Y    FHR IK FMIQ GD   G G G  SI+   F DE     KH   G+LSMAN G ++NG QFFIT A    LD  H VFG+V+G GL V+ K+E++     +RP+
Sbjct:  295 GNINVELFSDKKPKTCHNFIELAKTGY--------YNDVIFHRNIKKFMIQGGD-PTGTGKGGESIWKRYFPDEIKTTLKHDARGVLSMANRGKDTNGSQFFITYAAAPHLDGLHTVFGKVVG-GLDVLSKLESIPVDEKDRPE 428          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL2_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibberella zeae GN=CYP8 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21
Identity = 62/143 (43.36%), Postives = 79/143 (55.24%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            G + +EL+ + APK   NF +     Y        YKG  FHR I +FMIQ GD   G G G  S++G  FDDE +    H G G LSMAN G N+N  QFF        LD KH VFG+V+ + + V+ K+ENV T  +NRP
Sbjct:  332 GDLTIELYPEFAPKAVWNFIKLSQTGY--------YKGVAFHRNIPNFMIQGGD-PSGSGRGGQSVWGKYFDDEFDGPMTHNGRGTLSMANKGKNTNSSQFFFAYKPTPHLDRKHTVFGKVV-ENINVLSKMENVPTDGSNRP 464          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPI1_STAAW (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MW2) GN=MW0836 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21
Identity = 67/170 (39.41%), Postives = 79/170 (46.47%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAK----------------------------CDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            G +  +LF +IAPKT ENF       Y        Y G  FHRVI DFMIQ GD     G G  SIYG  F+DE  +      G LSMANSGPN+NG QFFI   K                              WLD KH VFG+++ DG   +  I N   GP ++P
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHAKNGY--------YDGITFHRVINDFMIQGGD-PTATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQII-DGETTLEDIANTKVGPQDKP 184          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPI1_STAAS (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0824 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21
Identity = 67/170 (39.41%), Postives = 79/170 (46.47%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAK----------------------------CDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            G +  +LF +IAPKT ENF       Y        Y G  FHRVI DFMIQ GD     G G  SIYG  F+DE  +      G LSMANSGPN+NG QFFI   K                              WLD KH VFG+++ DG   +  I N   GP ++P
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHAKNGY--------YDGITFHRVINDFMIQGGD-PTATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQII-DGETTLEDIANTKVGPQDKP 184          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPI1_STAAR (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0916 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21
Identity = 67/170 (39.41%), Postives = 79/170 (46.47%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAK----------------------------CDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            G +  +LF +IAPKT ENF       Y        Y G  FHRVI DFMIQ GD     G G  SIYG  F+DE  +      G LSMANSGPN+NG QFFI   K                              WLD KH VFG+++ DG   +  I N   GP ++P
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHAKNGY--------YDGITFHRVINDFMIQGGD-PTATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQII-DGETTLEDIANTKVGPQDKP 184          
The following BLAST results are available for this feature:
BLAST of FC920564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
PPIL2_SCHPO1.055e-2145.52Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]
SDC10_MOUSE1.377e-2139.22Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mu... [more]
SDC10_RAT1.799e-2138.56Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ra... [more]
PPIL3_GIBZE3.069e-2144.30Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibb... [more]
PPIL3_CRYNE4.008e-2141.96Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryp... [more]
PPIL2_RHIOR4.008e-2144.44Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhiz... [more]
PPIL2_GIBZE4.008e-2143.36Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibb... [more]
PPI1_STAAW4.008e-2139.41Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAS4.008e-2139.41Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAR4.008e-2139.41Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionC32010A06EF RVDevelop1 Citrus clementina cDNA clone C32010A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920564 ID=FC920564; Name=FC920564; organism=Citrus clementina; type=EST; length=697bp
GGAGAGTCCGAAGTCGAAGCCCTCAGTAGCTTGTAGAGTTAAGGAAGTGC
GAGAGAAATTGATGGCATCCGGAGGAGGAGGAGGAGGAGGAAGTGTGGAG
TGGCACGTGCGGCCTCCAAACCCAAAAAACCCAATCGTATTTTTCGATGT
CACAATCGGTACCATCCCCGCTGGTCGAATCAAGATGGAGCTCTTCGCCG
ACATCGCCCCTAAAACCGCCGAAAATTTTAGGCAGTTCTGCACCGGCGAG
TACAGAAAGGGAGGATTGCCTGTTGGTTACAAGGGATGCCAGTTCCATAG
GGTGATCAAGGATTTTATGATTCAAGCTGGTGATTTTCTGAAGGGTGATG
GTAGTGGATGTACTTCAATTTATGGACATAAGTTTGATGATGAAAATTTT
ATTGCTAAACACACTGGTCCAGGTCTATTATCTATGGCAAACAGCGGACC
AAATTCTAATGGGTGCCAGTTCTTTATCACTTGTGCAAAATGTGATTGGC
TTGACAATAAGCACGTTGTATTTGGGAGGGTGCTTGGAGATGGTCTTTTG
GTTGTCAGGAAGATCGAGAATGTGGCCACCGGACCCAACAACCGGCCTAA
ACTGGCATGCACTATCGCAGAATGTGGAGAAATGTGAAACTGATAACTTG
AAAACAATTGTGGCATTGCTAAGGACTGATAAAAAAGAAATATCCGT
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