FC920564

Overview
NameFC920564
Unique NameFC920564
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPI1_STAS1 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1821 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.862e-18
Identity = 63/176 (35.80%), Postives = 78/176 (44.32%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFIT----------------------------CAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTI 616
            G +  +L  D+APKT ENF       Y        Y G  FHRVI DFM+Q GD     G G  SIYG  F+DE         G LSMAN+GP++NG QFFI                                  WLD KH VFG+++ +G   +  I N   GP ++P    TI
Sbjct:   25 GDMTFKLLPDVAPKTVENFVTHAKNGY--------YNGVTFHRVINDFMVQGGD-PTATGMGGESIYGEPFEDEFSKEAFNIYGALSMANAGPHTNGSQFFIVQMNEVPESMLSQLADGGWPEPIVKAYAETGGTPWLDQKHTVFGQLI-EGKDTLEDIANTKVGPQDKPLHDITI 190          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL3_DICDI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dictyostelium discoideum GN=ppil3 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 59/143 (41.26%), Postives = 76/143 (53.15%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            G IK+E+F D  P  +ENF   C   Y        Y    FHR IK FMIQ GD     G G  SI+  +F DE     KH   G+LSMANSGP++NG QFFIT  K   L+  + VFG+++  G+ V+  +E V     + P
Sbjct:   10 GDIKVEIFCDSVPLASENFLALCASNY--------YNNTIFHRNIKGFMIQGGD-PTNTGRGGESIWKKQFKDEFPSHLKHNTRGILSMANSGPDTNGSQFFITYGKHRSLNKVYTVFGKIIA-GIEVLDLMEKVPVDDKDLP 142          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18
Identity = 59/142 (41.55%), Postives = 71/142 (50.00%), Query Frame = 2
Query:  170 AGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNN 592
            +G I +EL  + APK   NF +     Y        YK   FHR IK FMIQ GD   G G G  SI+G  F+DE     KH   G LSMAN G N+N  QFFI       L+NKH +FG V+ D       + N+ T P N
Sbjct:  308 SGDINLELQTEYAPKAVWNFIKLAKKGY--------YKDVTFHRNIKGFMIQGGD-PSGTGRGGESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVIDDPTPSSTTLNNLETHPVN 440          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus fumigatus GN=cyp8 PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.239e-18
Identity = 58/141 (41.13%), Postives = 70/141 (49.65%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNN 592
            G + +EL  + APK   NF +     Y        YK   FHR IK FMIQ GD   G G G  SI+G  F+DE     KH   G LSMAN G N+N  QFFI       L+NKH +FG V+ D       + N+ T P N
Sbjct:  322 GDVNLELHTEYAPKAVWNFIKLAKKGY--------YKDVTFHRNIKGFMIQGGD-PTGTGRGGESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVIDDPTPSSPTLNNMETHPVN 453          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIA_MYCLE (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium leprae GN=ppiA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17
Identity = 66/151 (43.71%), Postives = 80/151 (52.98%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTG--EY---RKGGLPVG--YKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLG-DGLLVVRKIENVATGPNNRP 598
            G IK+ LF +  PKT  NF     G  EY      G P G  Y G  FHRVI+ FMIQ GD   G G G     G+KF DE +   +   P LL+MAN+GP +NG QFFIT  +   L+ +H +FG V   D   VV  I   AT  N+RP
Sbjct:   24 GDIKVALFGNHVPKTVANFVGLAQGTKEYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGD-PTGTGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGETPHLNRRHTIFGEVTDPDSQKVVDAISTTATDGNDRP 170          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CWC27_CRYNE (Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus neoformans GN=CWC27 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17
Identity = 59/145 (40.69%), Postives = 75/145 (51.72%), Query Frame = 2
Query:  170 AGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGP-NSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            AG I++EL+    PK   NF       Y        Y G  FHRV+  F+IQ+GD   G G G  S YG  F+DE +   K    GLL MAN+G  NSN  QFFIT      L NKH +FG+++G+ +  V  I N+ T    RP
Sbjct:   21 AGEIEVELWGKECPKAVRNFLALTMEGY--------YDGVIFHRVVPGFIIQSGD-PTGTGMGGESFYGEPFEDEIHGRLKFNRRGLLGMANNGSRNSNTSQFFITLDAAPELTNKHTMFGKIVGNTIFNVLNIGNLDTDKEERP 156          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 62/171 (36.26%), Postives = 79/171 (46.20%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFIT-----------CAKCDW----------------LDNKHVVFGRVLGD-GLLVVRKIENVATGPNNRPK 601
            G + + LF D APKT  NF       Y        Y G  FHR+I +FMIQ GD   G G G  SIYG  F+DE     +   G LSMAN+GPN+NG QFFI              +  W                LD +H VFG+++ +    V+  I  V TG  ++PK
Sbjct:  297 GDMTLVLFPDHAPKTVANFLGLAKEGY--------YDGIIFHRIIPEFMIQGGD-PTGTGMGGQSIYGESFEDEFSDELYNLRGALSMANAGPNTNGSQFFIVQNSKIPYAKKELERGGWPTPIAAAYAENGGTPHLDRRHTVFGQLVDETSFQVLDLIAGVETGAQDKPK 458          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL6_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus musculus GN=Ppil6 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = 2
Query:  125 KNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGE--YRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSM 436
            K+  V+ D+ I   P GR+  EL+ D  P+T  NF+  CTG   + + G  + YK   FHRV+++  IQ GD ++G G    SIYG  F+DENF   H   G+L M
Sbjct:  142 KHDFVYLDICIDLSPIGRLIFELYCDACPRTCTNFQVLCTGTSGFSERGTKLHYKDSIFHRVVQNGWIQGGDIVQGRGDDGESIYGPTFEDENFSIPHNKRGVLGM 247          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL2_EMENI (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emericella nidulans GN=cyp8 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 60/148 (40.54%), Postives = 72/148 (48.65%), Query Frame = 2
Query:  170 AGRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGD---GLLVVRKIENVATGP-NNRP 598
            +G I +EL  + APK   NF +     Y        YK   FHR IK FMIQ GD   G G G  SI+G  F+DE     KH   G LSMAN G N+N  QFFI       L+ KH +FG V+ D       + K+E     P  NRP
Sbjct:  319 SGDINLELHTEYAPKAVWNFIKLAKKGY--------YKDVTFHRNIKGFMIQGGD-PTGTGRGGESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNLKHTIFGHVIDDPTPSSPTLNKLETHPVNPTTNRP 457          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL3_USTMA (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ustilago maydis GN=CYP10 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16
Identity = 57/146 (39.04%), Postives = 76/146 (52.05%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE-NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLL---VVRKIENVATGPNNRP 598
            G IK+E+F D  P+ AENF   C            Y   ++HR IK FMIQ GD   G G G  SI+G  F DE     K    G+++ AN+GP++N  QFFIT AK   LD K+ + G+V+ DG      +  +E +     NRP
Sbjct:   10 GDIKVEVFCDATPRAAENFLGHCAAGT--------YNDVKWHRNIKSFMIQTGD-PTGTGKGGQSIWGKPFADEIRSSLKFDRRGIVACANAGPDTNKSQFFITYAKQPHLDGKYTIIGKVI-DGAEDGGTLDAMEAIPVDAKNRP 145          
The following BLAST results are available for this feature:
BLAST of FC920564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
PPI1_STAS11.862e-1835.80Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL3_DICDI3.176e-1841.26Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dict... [more]
PPIL2_ASPOR5.417e-1841.55Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL2_ASPFU9.239e-1841.13Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIA_MYCLE1.207e-1743.71Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
CWC27_CRYNE1.207e-1740.69Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus ne... [more]
BPPI_STRP61.742e-1636.26Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
PPIL6_MOUSE2.276e-1640.57Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus ... [more]
PPIL2_EMENI2.276e-1640.54Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emer... [more]
PPIL3_USTMA3.882e-1639.04Peptidyl-prolyl cis-trans isomerase-like 3 OS=Usti... [more]

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Properties
Property NameValue
Genbank descriptionC32010A06EF RVDevelop1 Citrus clementina cDNA clone C32010A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920564 ID=FC920564; Name=FC920564; organism=Citrus clementina; type=EST; length=697bp
GGAGAGTCCGAAGTCGAAGCCCTCAGTAGCTTGTAGAGTTAAGGAAGTGC
GAGAGAAATTGATGGCATCCGGAGGAGGAGGAGGAGGAGGAAGTGTGGAG
TGGCACGTGCGGCCTCCAAACCCAAAAAACCCAATCGTATTTTTCGATGT
CACAATCGGTACCATCCCCGCTGGTCGAATCAAGATGGAGCTCTTCGCCG
ACATCGCCCCTAAAACCGCCGAAAATTTTAGGCAGTTCTGCACCGGCGAG
TACAGAAAGGGAGGATTGCCTGTTGGTTACAAGGGATGCCAGTTCCATAG
GGTGATCAAGGATTTTATGATTCAAGCTGGTGATTTTCTGAAGGGTGATG
GTAGTGGATGTACTTCAATTTATGGACATAAGTTTGATGATGAAAATTTT
ATTGCTAAACACACTGGTCCAGGTCTATTATCTATGGCAAACAGCGGACC
AAATTCTAATGGGTGCCAGTTCTTTATCACTTGTGCAAAATGTGATTGGC
TTGACAATAAGCACGTTGTATTTGGGAGGGTGCTTGGAGATGGTCTTTTG
GTTGTCAGGAAGATCGAGAATGTGGCCACCGGACCCAACAACCGGCCTAA
ACTGGCATGCACTATCGCAGAATGTGGAGAAATGTGAAACTGATAACTTG
AAAACAATTGTGGCATTGCTAAGGACTGATAAAAAAGAAATATCCGT
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