FC920564

Overview
NameFC920564
Unique NameFC920564
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15
Identity = 60/138 (43.48%), Postives = 71/138 (51.45%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDE---NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVL-GDGLLVVRKIENV 574
            G + +EL    APKT  NF Q C     K G    Y    FHR I  FMIQ GD   G G G +SI+   F DE       KH   G+LSMAN G ++N  QFFIT      LD KH VFGR++ GD    + K+E V
Sbjct:  302 GALNLELHCGKAPKTCFNFLQLC-----KHGK---YDDTLFHRNIPGFMIQGGD-PTGTGRGGSSIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDGDKDATLTKMEQV 430          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CYP7_SCHPO (Peptidylprolyl isomerase cyp7 OS=Schizosaccharomyces pombe GN=cyp7 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 54/147 (36.73%), Postives = 69/147 (46.94%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDEN-----FIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRP 598
            G I++EL+    PK   NF Q C   Y        Y G   HRV+ +F+IQ GD   G G G  SIYG  F  E      FI +    GL+ MA +    N  QFFIT       + K  +FGRV+GD +  V +I  +    N RP
Sbjct:   22 GDIQIELWCKEVPKACRNFIQLCLEGY--------YDGTIVHRVVPEFLIQGGD-PTGTGMGGESIYGEPFAVETHPRLRFIRR----GLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVVGDTIYNVVRISELELDANQRP 155          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL4_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus GN=Ppil4 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 48/140 (34.29%), Postives = 71/140 (50.71%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFI--------AKHTGPGLLSMANSGPNSNGCQFFITCAK-CDWLDNKHVVFGRVLGDGLLVVRKI 565
            G + ++L+ +  P+   NF + C  +Y        Y  C  H V +DF+IQ GD   G G G  SI+G  + D+            KH   G +SM N+G + +G QF IT  +  D+LD  H VFG V  +G+ +V+KI
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLCKIKY--------YNYCLIHNVQRDFIIQTGD-PTGTGRGGESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVT-EGMDIVKKI 139          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL4_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo sapiens GN=PPIL4 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13
Identity = 47/140 (33.57%), Postives = 71/140 (50.71%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFI--------AKHTGPGLLSMANSGPNSNGCQFFITCAK-CDWLDNKHVVFGRVLGDGLLVVRKI 565
            G + ++L+ +  P+   NF + C  +Y        Y  C  H V +DF+IQ GD   G G G  SI+G  + D+            KH   G +SM N+G + +G QF IT  +  D+LD  H VFG V  +G+ +++KI
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLCKIKY--------YNYCLIHNVQRDFIIQTGD-PTGTGRGGESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVT-EGMDIIKKI 139          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CWC27_ASPFU (Peptidyl-prolyl isomerase cwc27 OS=Aspergillus fumigatus GN=cwc27 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12
Identity = 58/170 (34.12%), Postives = 78/170 (45.88%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGH---KFDDE--------------NFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCD-WLDNKHVVFGRVLGDGLLVVRKI-ENVATGPNNRPKLACTIAEC 625
            G I + LFA+  P T +NF Q C   Y        Y G  FHR++ DF++Q GD   G GSG TSIY +   ++D E              +   +    GL+ MA S   + G QFFIT A  +  L+ +  +FGRV GD +  V KI E        RP     +  C
Sbjct:   22 GPIHIALFANQTPLTCKNFLQHCLDNY--------YAGTIFHRIVPDFIVQGGD-PTGTGSGGTSIYEYPEFEYDPEARDPNEKVVLRDELHSRLRFNRRGLVGMAKSEDGTYGSQFFITLANAERELNGQCTLFGRVEGDSIYNVLKIAEAERVERTERPVYPVKVVSC 182          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CWC27_NEUCR (Peptidyl-prolyl isomerase cwc-27 OS=Neurospora crassa GN=cwc-27 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.604e-12
Identity = 57/158 (36.08%), Postives = 68/158 (43.04%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIY-------------------------GHKFDDE-NFIAKHTGPGLLSMANSG-PNSNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKI 565
            G I +ELFA   P T  NF Q     Y        Y    FHR+I  F++Q GD   G G G  SIY                         G  F DE +   K    GLL MAN G P++N  QFF T  K D L  K+ +FGRV GD +  + KI
Sbjct:   22 GEIAVELFAKQTPLTCRNFLQLALDGY--------YDNTIFHRLIPGFIVQGGD-PSGTGHGGESIYDNGALSGDLDPWPMDQRRGKNAGPHGVNFKDEFHSRLKFNRRGLLGMANEGAPDTNSSQFFFTLGKADELTGKNTMFGRVAGDTIYNLAKI 170          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL_MIMIV (Structural PPIase-like protein L605 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L605 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 61/199 (30.65%), Postives = 87/199 (43.72%), Query Frame = 2
Query:  113 PPNPKNPIVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGE-YRKGGLPVG-----------YKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHK-----FDDENFIAKHTGPGLLSMA----NSGPNSNGCQFFITCAK------CDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACTIAECG 628
            P + KNP V+ D+ +     GR++++LF D  P   ENF Q   G+ YR      G           Y+GC+FH V+ +  I +GD    +GS   ++Y  +     F D  +   H   GLLS+      SG       F IT          D LD   VV G+V G GL V+ KI ++      R     +I +CG
Sbjct:    9 PNSGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGDIYNSNGSSAGTVYCDEPIPPVFGD--YFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYG-GLDVLDKINSMIKPYAGRKYPTFSIGKCG 204          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: PPIL3_EMENI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emericella nidulans GN=cyp10 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12
Identity = 58/182 (31.87%), Postives = 76/182 (41.76%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGS----------------GCTSIYGHKFDDENF---IAKHTGPGLLSMAN--------------SGPNSNGCQFFITCAKCDWLDNKHVVFGRVLG-----DGLLVVRKIENVATGPNNRPKL 604
            G +K+ELF +  PKTAENF   C            Y    FHR+I  FMIQ GD   G  +                G TSIY     ++       +H   G+LSMA+              +GP  NG QFFIT A    LD    VFG+VL      +G  V+ K+E      + + K+
Sbjct:   10 GDLKVELFCEAVPKTAENFIALCAAG--------AYNDTPFHRLIPGFMIQGGDISLGPAANSQGTTPMLPFDDIPKGGTSIYHPSALNQEIHLPALRHNTRGILSMASRPVKNQTAPGSQGATGPTINGSQFFITFAAAPHLDGSSTVFGKVLNLTAEDEGGDVLSKLEKANVKTDKKGKV 183          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CYPR_YEAST (Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccharomyces cerevisiae GN=CPR4 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 53/166 (31.93%), Postives = 78/166 (46.99%), Query Frame = 2
Query:  134 IVFFDVTIGTIPAGRIKMELFADIAPKTAENFRQFCTGEYR--KGGLP-----VGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCDW---LDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPK 601
            I +FD    ++    +  EL+  + PKT  NF     G     +G  P       Y+  + ++V  +  IQ G  +     G  ++YG KFDDENF  KH  P  L+MA  GP+SN  +F IT  K D    LD K VVFG++      ++  I+   T    +P+
Sbjct:   53 IEYFDPVSKSMKEADLTFELYGTVVPKTVNNFAMLAHGVKAVIEGKDPNDIHTYSYRKTKINKVYPNKYIQGG--VVAPDVGPFTVYGPKFDDENFYLKHDRPERLAMAYFGPDSNTSEFIIT-TKADGNEELDGKSVVFGQITSGLDQLMDAIQYTETDEYGKPQ 215          
BLAST of FC920564 vs. ExPASy Swiss-Prot
Match: CWC27_EMENI (Peptidyl-prolyl isomerase cwc27 OS=Emericella nidulans GN=cwc27 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 59/170 (34.71%), Postives = 74/170 (43.53%), Query Frame = 2
Query:  173 GRIKMELFADIAPKTAENFRQFCTGEYRKGGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHK-----------------FDDENFIAKHTGPGLLSMANSGPNSNGCQFFITCAKCD-WLDNKHVVFGRVLGDGLLVVRKI-ENVATGPNNRPKLACTIAEC 625
            G + + LFA   P T  NF Q C   Y        Y G  FHRV+ DF+IQ GD   G GSG TSIY +                   D+ +   +    GL+ MA S   S G QFFIT A  +  L+ +  +FGR+ GD L  + KI E        RP     I  C
Sbjct:   22 GPLHIALFAKQTPLTCRNFLQHCMDNY--------YAGTIFHRVVPDFIIQGGD-PTGTGSGGTSIYEYPEFEYDPDARDPNEKVVLRDEIHSRLRFNRRGLVGMAKSEDGSYGSQFFITLANTERELNGQCTLFGRLEGDSLYNMLKIAEAERIEGTERPVYPVKITSC 182          
The following BLAST results are available for this feature:
BLAST of FC920564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 240
Match NameE-valueIdentityDescription
PPIL2_USTMA1.129e-1543.48Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]
CYP7_SCHPO1.057e-1336.73Peptidylprolyl isomerase cyp7 OS=Schizosaccharomyc... [more]
PPIL4_MOUSE6.852e-1334.29Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus ... [more]
PPIL4_HUMAN8.949e-1333.57Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo... [more]
CWC27_ASPFU1.169e-1234.12Peptidyl-prolyl isomerase cwc27 OS=Aspergillus fum... [more]
CWC27_NEUCR2.604e-1236.08Peptidyl-prolyl isomerase cwc-27 OS=Neurospora cra... [more]
PPIL_MIMIV3.401e-1230.65Structural PPIase-like protein L605 OS=Acanthamoeb... [more]
PPIL3_EMENI4.441e-1231.87Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emer... [more]
CYPR_YEAST7.576e-1231.93Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccha... [more]
CWC27_EMENI7.576e-1234.71Peptidyl-prolyl isomerase cwc27 OS=Emericella nidu... [more]

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Properties
Property NameValue
Genbank descriptionC32010A06EF RVDevelop1 Citrus clementina cDNA clone C32010A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920564 ID=FC920564; Name=FC920564; organism=Citrus clementina; type=EST; length=697bp
GGAGAGTCCGAAGTCGAAGCCCTCAGTAGCTTGTAGAGTTAAGGAAGTGC
GAGAGAAATTGATGGCATCCGGAGGAGGAGGAGGAGGAGGAAGTGTGGAG
TGGCACGTGCGGCCTCCAAACCCAAAAAACCCAATCGTATTTTTCGATGT
CACAATCGGTACCATCCCCGCTGGTCGAATCAAGATGGAGCTCTTCGCCG
ACATCGCCCCTAAAACCGCCGAAAATTTTAGGCAGTTCTGCACCGGCGAG
TACAGAAAGGGAGGATTGCCTGTTGGTTACAAGGGATGCCAGTTCCATAG
GGTGATCAAGGATTTTATGATTCAAGCTGGTGATTTTCTGAAGGGTGATG
GTAGTGGATGTACTTCAATTTATGGACATAAGTTTGATGATGAAAATTTT
ATTGCTAAACACACTGGTCCAGGTCTATTATCTATGGCAAACAGCGGACC
AAATTCTAATGGGTGCCAGTTCTTTATCACTTGTGCAAAATGTGATTGGC
TTGACAATAAGCACGTTGTATTTGGGAGGGTGCTTGGAGATGGTCTTTTG
GTTGTCAGGAAGATCGAGAATGTGGCCACCGGACCCAACAACCGGCCTAA
ACTGGCATGCACTATCGCAGAATGTGGAGAAATGTGAAACTGATAACTTG
AAAACAATTGTGGCATTGCTAAGGACTGATAAAAAAGAAATATCCGT
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