FC920570

Overview
NameFC920570
Unique NameFC920570
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:1..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.222e-16
Identity = 60/207 (28.99%), Postives = 101/207 (48.79%), Query Frame = 2
Query:   35 FELLSLLIVYFFWRIIAKSINKREKNTAPEPSGA-WPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEETGSEA 652
            + LL LL+++ F  I       + +N    PS    P+IG+L  L G  P  + L  L+ KYGP+  L LG  P+++ S  +  +D   T+D + ATR K      + Y +     +P+G+YW  +R I    LLS+ R++  + VR  E    I+ +   C  +  N     + + +  LT NI+ ++  G+ +   D  E+G +A
Sbjct:    8 YSLLILLLLFIFLLIHHCFTTSKTQNMFLPPSPRKLPIIGNLHQL-GSHPH-RSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDASVIN-----LGEHLCFLTNNITSRVALGRTY---DERESGIDA 204          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.722e-16
Identity = 57/197 (28.93%), Postives = 96/197 (48.73%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 631
            LL L +++F      K ++  +    P P G  P+IG+L  L   + + +    L+  YGP+  L  G  P+++VS  E  ++   T+D    TR K+ A K   Y+      A YG  WR++RK+A  EL SS +L+  +++R  E +  +  L    S++A     V + K +   T +I  +L  G+ F   D+
Sbjct:   10 LLPLFLIFF------KKLSPSKGKLPPGPLGL-PIIGNLHQLG--KSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKL----SKSAETRTMVDLRKALFSYTASIVCRLAFGQNFHECDF 193          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.722e-16
Identity = 60/199 (30.15%), Postives = 101/199 (50.75%), Query Frame = 2
Query:   35 FELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 631
            F L++L  + FF    AK I   + N  P P   +P+IG+L  + G+ P  + L  LA++YGP+  L  G  P+ +VS  E  ++   T+D    +R K+V  + +  +       PYG  W+  RK A  EL    +++  +H+R  E +  +K L    SE+A N + V +SK +  LT +I  ++  G+ F   ++
Sbjct:    8 FCLITLASLIFF----AKKIKHLKWNLPPSPP-KFPVIGNLHQI-GELPH-RSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQL----SESAVNRSPVDLSKSLFWLTASIFFRVALGQNFHESNF 195          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.556e-16
Identity = 54/161 (33.54%), Postives = 85/161 (52.80%), Query Frame = 2
Query:   29 AIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL 505
            +IF  +S L +   W+   K +N  +  T   P G W  P IG +  L G  P  ++L  LA+KYGP+  L+LG+   ++V+  E+ K    T+D   A+R K++A   + Y+    A +PYG YWR +RKI   E+LS+  +     +R+ EV   I  +
Sbjct:    5 SIFLFISFLFLLRKWK---KYLNNSQ--TKKLPPGPWKLPFIGGMHHLAGGLPH-RVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSI 159          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.556e-16
Identity = 58/183 (31.69%), Postives = 94/183 (51.37%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKRE-KNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNI 586
            LLSL+ V      +    N+R  + T P P G  P+IG+L  L G+ P  + L  L+ KYGP+  L+LG+ P +IVS  E  K     +D    +R      + + Y+    A +PY  YW+++RK+A  EL SS ++  ++ ++  EV    K L    SE+A     + ++K +  LT ++
Sbjct:    6 LLSLIFVICILVAVFNHKNRRNYQRTPPSPPGC-PIIGNLHQL-GELPH-QSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEV----KKLIDSISESAAQKTPINLNKTLLALTVSV 181          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.556e-16
Identity = 55/192 (28.65%), Postives = 93/192 (48.44%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 616
            L++LL    F   + K        T P      P++G+L  L G  P  + L +L+ +YGP+  L  G  P+L+ S  E  ++     D   + R  +   + + YDN   A APYG+YWR IR I   +LLS+ R++  + VR  E    ++ +  L  +     A V ++ L+  LT ++  ++  GK++
Sbjct:    2 LIALLCTLPFLFFLKKWRRSYSGKTPPPSPPKLPVLGNLHQL-GTFPH-RSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQL--QKTTPTAAVNLTDLLTCLTNDVFCRIALGKKY 189          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.065e-16
Identity = 58/201 (28.86%), Postives = 94/201 (46.77%), Query Frame = 2
Query:   11 STSFSPAIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 613
            ST F   +  +   L  Y F R + K       +  P P+G WP+IG LPLL     +   L  +A KYGPI  L+LG    ++ S  +  +    T+D   + R       Y+ Y+      A YG  W+ +RK+ +  +L    LE   HV+ SEV   +K++Y   S++   P  VV+ +++     N+  ++I  +R
Sbjct:    6 STLFYELVAAISLYLATYSFIRFLFKP--SHHHHLPPGPTG-WPIIGALPLLGTMPHVS--LADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQDMVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEMYEQSSKSV--PVPVVVPEMLTYAMANMIGRIILSRR 199          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.921e-16
Identity = 61/203 (30.05%), Postives = 100/203 (49.26%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKREKNTA------PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 631
            LL +L+V ++  + ++S N+            P      P++G+L LL G  P  K L  LA +YGP+  LRLG  P ++VS  E  ++    +D    +R      K + YD      APYG+YWR++RK+   ELLS  R++   + R  E+D  + DL       A + A +V++  +  LT  I   +  G  +++K +
Sbjct:   25 LLPVLLVSYYL-LTSRSRNRSRSGKLGGAPRLPPGPAQLPILGNLHLL-GPLPH-KNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADL----DRAAASKASIVLNDHVFALTDGIIGTVAFGNIYASKQF 220          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.035e-15
Identity = 55/193 (28.50%), Postives = 94/193 (48.70%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS 619
            LL L + + F  I  K + + ++N  P P+   P++G+L  L G    C  L  L+ K+GP+  L+LG  P++++S  E  ++   T+D    TR    A +    +N    L  Y   WR++RK+A  E  S  +++  ++VR  E    +K L  L    A   + V +SK +  L  +   + + G+ FS
Sbjct:    8 LLLLSLPFLFTLIYTKKMKESKRNLPPGPAKL-PIVGNLHQLQGMVHRC--LHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDL----ALKQSPVDLSKTLFCLAASTVFRPVFGQSFS 193          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.035e-15
Identity = 56/206 (27.18%), Postives = 99/206 (48.06%), Query Frame = 2
Query:   29 AIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEETGS 646
            +IF    LL++     II    ++  K   P      P+IG+L  LNG    C +   L   +GP+  L+LG  P++++S  +  ++   T+D    +R + +A K + Y+      APYG+ WR +RK+A  EL S  +    +++R  E D  +K L    SE +   + V + K +  L+ +I  +L  G+     ++ +  S
Sbjct:    2 SIFLCFLLLLLLLLVTIIFTRKSQSSKLKLPPGPPKLPIIGNLHYLNGLPHKCLL--NLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKL----SEASEKQSPVNLKKALFTLSASIVCRLAFGQNLHESEFIDEDS 201          
The following BLAST results are available for this feature:
BLAST of FC920570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
C71A4_SOLME1.222e-1628.99Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71BM_ARATH2.722e-1628.93Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH2.722e-1630.15Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71D7_SOLCH3.556e-1633.54Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BV_ARATH3.556e-1631.69Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71A6_NEPRA3.556e-1628.65Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C75A6_CAMME6.065e-1628.86Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71E1_SORBI7.921e-1630.054-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BP_ARATH1.035e-1528.50Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71BN_ARATH1.035e-1527.18Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32010B02EF RVDevelop1 Citrus clementina cDNA clone C32010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920570 ID=FC920570; Name=FC920570; organism=Citrus clementina; type=EST; length=669bp
GACCATGGATTCTACTTCTTTCTCCCCAGCAATTTTTGAGCTCTTATCTC
TGCTAATTGTCTATTTTTTTTGGAGAATCATAGCAAAATCTATAAACAAA
AGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGG
CCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAG
CATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCAT
CCCATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGATTGCTTCACTAC
CAATGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGCAGGCAAGTATA
TGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCAGTACTGG
CGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCT
TGAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACACTTTCATCAAAG
ATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTG
ATCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGCCTGAAACTGAT
AGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAAACAGGCAGCGAGG
CTTGGCGTATNCATAGAGC
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