FC920570

Overview
NameFC920570
Unique NameFC920570
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:1..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15
Identity = 57/200 (28.50%), Postives = 97/200 (48.50%), Query Frame = 2
Query:   38 ELLSLLIVYFFWRIIAKSINK---REKNTAPEPSGA--WPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSA 622
            E+LSL++    +  + + I +   R++   P P G   WP+IG+L  L G +P  +   A+A  YGP+  L++G   +++ +   +      T+D   ++R      ++M Y+      APYG  WR +RKI +  L S+  L+  +HVR  EV T  + L S           V + +L+   T N   +++ GKR  A
Sbjct:    2 EILSLILYTVIFSFLLQFILRSFFRKRYPLPLPPGPKPWPIIGNLVHL-GPKPH-QSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTLTRALASA------GQKPVKLGQLLNVCTTNALARVMLGKRVFA 193          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15
Identity = 54/206 (26.21%), Postives = 96/206 (46.60%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPI-CKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF--SAKDYEETGSE 649
            LLS+ +      +    +N+      P     WP++G+L  +   +PI C+     A++YGP+ S+  G    ++VS  E+ K+    ND+ LA R +  + +    +      A YG ++  +RK+   EL +  RLE L+ +R  EV   ++ +Y   +        +V+   +  + FN   +L  GKRF  +  D +E G E
Sbjct:    6 LLSVALAVVLIPLSLALLNRLRLGRLPPGPRPWPVLGNLRQI---KPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGDIDEQGRE 208          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.144e-14
Identity = 56/199 (28.14%), Postives = 97/199 (48.74%), Query Frame = 2
Query:   35 FELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 631
            F LL  L + F+ R++        K   P    + P+IG+L  L   + + +    L+ +YGP+  LR G  P+++ S  E  ++   T+D    TR K+ A     Y+      A YG+ WR++RK+A  EL SS +L+  +++R  E +  +K +    +E+A     V + K +   T +I  +L  G+ F   D+
Sbjct:    7 FLLLLPLFLVFYKRLLPS------KGKLPPGPISLPIIGNLHQLG--KSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKV----TESAQTQTLVDLRKALFSYTASIVCRLAFGQNFHECDF 193          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.144e-14
Identity = 50/177 (28.25%), Postives = 88/177 (49.72%), Query Frame = 2
Query:   77 IIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAG 607
            I++K +   +    P P    P+IG+L  L G    C     L+ K+GP+  L  G  P++++S  E  ++   T D    +R + VA + + Y+      APYG+ W+ +RK+   ELL++ + +  +++R  E D  IK L    +E+A   + V + K +  L  +I  +L  G
Sbjct:   20 ILSKRLKPSKWKLPPGPK-TLPIIGNLHNLTGLPHTC--FRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKL----TESALKKSPVNLKKTLFTLVASIVCRLAFG 189          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.951e-14
Identity = 52/189 (27.51%), Postives = 94/189 (49.74%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSE----NAFNPAKVVISKLIEQLTFNISLK 595
            LL L++++       K++   +    P P    P+IG+L       P  +    L++KYGPI  LR G  P++++S  E  ++   T+D    +R + V  + + Y+      APYG+ WR +RK++  EL SS +L+  +++R  E D  +K L  L S     N       ++  ++ ++ F I+L+
Sbjct:   10 LLPLILIFL------KNLKPSKWKLPPGPKKL-PIIGNLHQRRELHP--RNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINLR 189          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.328e-14
Identity = 50/176 (28.41%), Postives = 84/176 (47.73%), Query Frame = 2
Query:   89 SINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 616
            ++ +R +   P     WP++G+L  +      C      A  YGPI S+  G    +IVS  E+ K+    +D++LA R +  +      D      A YG ++  +RK+ T EL S  RLE L+ +R  EV + +  +Y+ C+        +++ K +  + FN   +L  GKRF
Sbjct:   19 TLYQRLRFKLPPGPRPWPVVGNLYDIKPVRFRC--FAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRF 192          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.328e-14
Identity = 58/208 (27.88%), Postives = 98/208 (47.12%), Query Frame = 2
Query:   38 ELLSLLIVYFFWRIIAKSI----NKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEETGSE 649
            EL+   I+Y    II + +    + R +   P P G WP+IG LPLL G   +   L  +A KYGPI  L++G   +++ S     K    T D   + R       +M Y+      APYG  W+ +RK++   +L    LE   +VR +E+   +K ++    + +    ++V++   + LTF ++  +I     S + + E G E
Sbjct:    7 ELIGATIIYIIVYIIIQKLIATGSWRRRRLPPGPEG-WPVIGALPLLGGMPHVA--LAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMF----DASHVGERIVVA---DMLTFAMA-NMIGQVMLSKRVFVEKGKE 203          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.328e-14
Identity = 51/163 (31.29%), Postives = 81/163 (49.69%), Query Frame = 2
Query:   38 ELLSLLIVYFFWRIIAKSIN-----KREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYS 511
            +LLS +I+     I++  IN     K ++N  P P    P+IGHL  L G  P   +  ++A KYGP+  ++LG+   +++S  E  K      D   A R   +  + M YD      +PY  +WR +R+I  TELLS   +    ++R  E++  I+ L S
Sbjct:    4 DLLSAIIILVATYIVSLLINQWRKSKSQQNLPPSPPKL-PVIGHLHFLWGGLPQ-HVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGS 164          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.328e-14
Identity = 51/163 (31.29%), Postives = 81/163 (49.69%), Query Frame = 2
Query:   38 ELLSLLIVYFFWRIIAKSIN-----KREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYS 511
            +LLS +I+     I++  IN     K ++N  P P    P+IGHL  L G  P   +  ++A KYGP+  ++LG+   +++S  E  K      D   A R   +  + M YD      +PY  +WR +R+I  TELLS   +    ++R  E++  I+ L S
Sbjct:    4 DLLSAIIILVATYIVSLLINQWRKSKSQQNLPPSPPKL-PVIGHLHFLWGGLPQ-HVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGS 164          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.346e-14
Identity = 57/183 (31.15%), Postives = 92/183 (50.27%), Query Frame = 2
Query:   59 VYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDT---FIKDLYSLCSENAFNPAKVVIS-KLIEQLTFNISLK 595
            V+F   II ++  K +KN  P P    P+IG+L  L G +P   +   L++KYGP+ +LR G    ++ S  E VK+   T D    +R  +     + Y+       PY +YWR++RK+   EL ++ R++  +H R  EV +   FI    SL      N   + +S  +I ++ F I+LK
Sbjct:   11 VFFSTIIIVRNTRKTKKNLPPGPPRL-PIIGNLHQL-GSKPHSSMF-KLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLEKPVNLNTKLMKLSGSVICRVVFGINLK 190          
The following BLAST results are available for this feature:
BLAST of FC920570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
F3PH_PETHY8.758e-1528.50Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C98A1_SORBI8.758e-1526.21Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71BL_ARATH1.144e-1428.14Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH1.144e-1428.25Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71BS_ARATH1.951e-1427.51Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN3.328e-1428.41Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C75A2_SOLME3.328e-1427.88Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71DI_MENSP3.328e-1431.29Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR3.328e-1431.29Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71BB_ARATH4.346e-1431.15Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32010B02EF RVDevelop1 Citrus clementina cDNA clone C32010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920570 ID=FC920570; Name=FC920570; organism=Citrus clementina; type=EST; length=669bp
GACCATGGATTCTACTTCTTTCTCCCCAGCAATTTTTGAGCTCTTATCTC
TGCTAATTGTCTATTTTTTTTGGAGAATCATAGCAAAATCTATAAACAAA
AGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGG
CCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAG
CATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCAT
CCCATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGATTGCTTCACTAC
CAATGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGCAGGCAAGTATA
TGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCAGTACTGG
CGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCT
TGAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACACTTTCATCAAAG
ATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTG
ATCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGCCTGAAACTGAT
AGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAAACAGGCAGCGAGG
CTTGGCGTATNCATAGAGC
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