FC920570

Overview
NameFC920570
Unique NameFC920570
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:1..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.683e-14
Identity = 56/201 (27.86%), Postives = 93/201 (46.27%), Query Frame = 2
Query:   35 FELLSLLIVYFFWRI---IAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 628
            + LL  L V+ F  I      +  K+     P P    P+IG+L  L G  P  + L  L+ KYGP+  L  G  P+++ S  +  +D   T+D + A+R K      + Y +     +P+G+YWR  + I    LLS+ R++  ++VR  E    I  +   C  +  N  + + S     LT NI  ++  G+ +  K+
Sbjct:    8 YSLLIPLFVFIFLLIHHCFFTTSKKQNMLLLPSPRKL-PIIGNLHQL-GSLPH-RSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDSSVINLGEHLCS-----LTNNIISRVALGRTYDEKE 200          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.652e-13
Identity = 53/212 (25.00%), Postives = 109/212 (51.42%), Query Frame = 2
Query:    5 MDSTSFSPAIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRA--KIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 628
            M+    S  +  +L+LL++  F       +N+        P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ P+L+VS  ++  D   T+D  +A R   K+V   + G    +F+  PYG+YWR I+ +    LL+  +++  + VR  E+   ++ +    S++    + + +S+L+  LT +++ ++  G+++S ++
Sbjct:    1 MEMIIISLCLATILALLLLKQF-------LNRTYTAKVNLPPSPWRVPVIGNLHQLSLHPH--RSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNGGREMVFS--PYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDS----SPLNLSELLLTLTSDVTSRVSLGRKYSKEE 197          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 2
Query:   77 IIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 616
            I  K +   +    P P G  P+IG+L        + K L  ++ +YGP+  L  G  P++IVS  E  ++   T+D    +R K V      Y+      APYG+ WR++RKIA +EL S  +L+  +++R  E    ++ +     E     + V + K+I     +I  +L  G+ F
Sbjct:   16 IFLKKLLPSKGKLPPGPKGL-PIIGNLHQFG--RFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETP--TSSVNLRKVIFTFAASIICRLSFGQNF 190          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13
Identity = 48/164 (29.27%), Postives = 79/164 (48.17%), Query Frame = 2
Query:   77 IIAKSINKREKNTAPEPSGAW--PLIGHL-PLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLC-SENAFNPAKVVIS 556
            I+   + ++  +    P G W  PL+G L  LL  Q  +   L  LA KYGP+  LR G+   +++S     ++     D   A+R  ++  +   Y N     APYG YWR +RK+ T ELLS+  +  L  +R  E    ++++ +    +  F  A ++IS
Sbjct:   20 ILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSQPQVA--LRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGGKKPFTLATLLIS 181          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13
Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 2
Query:   44 LSLLIVYFFWRIIAKSINK--REKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIK 499
            L L+I+          +NK  R+  +  +     P+IGHL LL G  P   +L ++A +YGP+  ++LG+   +++S  E  K      D   A R   V  + M YDN     +PY  +W  +RKI  +ELLS   +     +R  E++  I+
Sbjct:    5 LLLVIIILVATYTVSLLNKQWRKPKSQQKQPPKLPVIGHLHLLWGGLPPQHLLRSIAREYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDSVGSRIMWYDNDDIIFSPYNDHWHQMRKICVSELLSPKNVRSFGFIRQEEIERLIR 158          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13
Identity = 50/193 (25.91%), Postives = 91/193 (47.15%), Query Frame = 2
Query:   44 LSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNG--QEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 616
            +SL+++     +  K   +R     P P G  P+IG+L  L     + +CK    L+ KYGP+  L+LG+ P +IVS  E  K      D    +R  +   + + Y+    A + +  YW+++RK+   EL  + R+  ++ ++ +E++  I  +    +E+A     V +S     L  N+  K + G  F
Sbjct:    7 VSLILLISILLVAVKHSKRRWVRQPPSPPGL-PIIGNLHQLGELPHQSLCK----LSKKYGPVMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNYLDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSI----AESASQKTLVNLSDTFLSLNVNVICKAVFGVNF 190          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13
Identity = 53/199 (26.63%), Postives = 98/199 (49.25%), Query Frame = 2
Query:   41 LLSLLIVYFFWRIIAKSINKREKNTAPE-PSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 628
            L+SL +      +  K + KR   T P+ P   W  P+IG+L  L G  P  + L +L+ +YGP+  L  G+ P+L+VS  ++  D   T+D   A R K  A              PYG+ W+ ++ +    LL++  +   +++R  E+    + L     E + + + V +SKL+  LT +I  ++  G++++ ++
Sbjct:    5 LISLCLTTLLAFLFLKPLLKRITTTKPKLPPSPWRLPVIGNLHQL-GPNPH-RYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKL----EEASSSSSSVNLSKLLMTLTNDIICRITLGRKYNEEE 197          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13
Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 2
Query:   47 SLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPIC-KILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATR-AKIVAGKYMGYDNA--IFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLY 508
            +++  Y  WR       + +KN  P P  A P+IGHL L++   PI  +    L+ ++GPI  L LG  P ++ S  E  K+   T++   + R  + VA K + YD+   +FA AP+G YW+ ++K+  +ELLS   ++    VR  E   FI  ++
Sbjct:   13 TIVFAYILWR------KQSKKNLPPSPK-ALPIIGHLHLVS---PIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVF 160          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13
Identity = 59/205 (28.78%), Postives = 98/205 (47.80%), Query Frame = 2
Query:   29 AIFELLSLLIVYFFWRIIAK------SINKREKNTA----PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGP--IYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAG 607
            A   LL  ++++   R+++       S NKR++       P P G  P+IGHL L+  +  I   +  L  K+G   +  LR+G  P L VS          T D I A+R   +A + + Y  +  A  PYG+Y R  RK+ TT +LS+ +++  +H R  EV   +  + +  +  A  PA V +S L+   T ++  + + G
Sbjct:   20 ATHALLLGVLIFLVIRLVSARRTGTTSANKRKQQQRLPLPPWPPGKLPIIGHLHLIGAETHIS--IRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPWMAAEIIRYGPSDVAFVPYGEYGRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKIRA--AATAAPPAAVDLSDLLSGYTNDVVSRAVLG 220          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.197e-13
Identity = 51/153 (33.33%), Postives = 75/153 (49.02%), Query Frame = 2
Query:   44 LSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATR-AKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIK 499
            + L+    F  I+ +  NK +    P P    P+IGHL LL+      +    L+ +YGPI  L LG  P ++ S  E  K+   T++   + R A  VA + + Y    F  APYG YW+ ++K+  +ELL  H L+    VR  E   FIK
Sbjct:    8 ICLISTIVFASILWRKQNKNKTLLPPSPMPL-PIIGHLHLLSPTPH--QDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIK 157          
The following BLAST results are available for this feature:
BLAST of FC920570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
C71A2_SOLME9.683e-1427.86Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71AE_ARATH1.652e-1325.00Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71B5_ARATH2.817e-1328.33Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C99A3_ORYSJ3.679e-1329.27Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C7D94_MENGR3.679e-1329.87Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71BA_ARATH3.679e-1325.91Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71AR_ARATH3.679e-1326.63Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN4.806e-1332.28Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71C2_MAIZE4.806e-1328.78Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C93A3_SOYBN8.197e-1333.33Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32010B02EF RVDevelop1 Citrus clementina cDNA clone C32010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920570 ID=FC920570; Name=FC920570; organism=Citrus clementina; type=EST; length=669bp
GACCATGGATTCTACTTCTTTCTCCCCAGCAATTTTTGAGCTCTTATCTC
TGCTAATTGTCTATTTTTTTTGGAGAATCATAGCAAAATCTATAAACAAA
AGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGG
CCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAG
CATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCAT
CCCATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGATTGCTTCACTAC
CAATGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGCAGGCAAGTATA
TGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCAGTACTGG
CGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCT
TGAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACACTTTCATCAAAG
ATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTG
ATCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGCCTGAAACTGAT
AGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAAACAGGCAGCGAGG
CTTGGCGTATNCATAGAGC
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