FC920570

Overview
NameFC920570
Unique NameFC920570
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:1..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11
Identity = 46/150 (30.67%), Postives = 83/150 (55.33%), Query Frame = 2
Query:  140 PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQ-YWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNI 586
            P+IG++ L+ G+ P  +    L+  YGP+ SL+LG    ++++  E  ++   T+D+IL+ R+   A + + + +A     P     WR +R+++ T+LLS  R+E  K +R ++V    K+L S  SE++     V IS++    T NI
Sbjct:   46 PIIGNIHLV-GKHPH-RSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKV----KELVSFISESSDREESVDISRVAFITTLNI 189          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11
Identity = 49/186 (26.34%), Postives = 86/186 (46.24%), Query Frame = 2
Query:   56 IVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 613
            +V + W      +N R     P P G WP++G LPLL     +   L  +A KYGP+  L++G   + + S  E  K    T D   + R       ++ Y+      A YG  W+ +RK++   +L    L+  + VR  E+      LY++ +E+  +   VV+S+++     N+  +++  KR
Sbjct:   24 LVQYLW------MNSRRHRLPPGPIG-WPVLGALPLLGTMPHVA--LANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYM---LYAM-AESGRHGQPVVVSEMLTYAMANMLGQVMLSKR 196          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11
Identity = 48/165 (29.09%), Postives = 78/165 (47.27%), Query Frame = 2
Query:  119 PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGP-IYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGK 610
            P P    P+IGHL L+ G  P    L ALA +YGP +  LRLG  P ++VS   + +    T D + ++R + +    + Y       APYG ++R  RK+ T  LL++ ++   +  R  EV    +         A     V +S+L+     N+  + ++GK
Sbjct:   69 PSPPMKLPIIGHLHLM-GDIPYVS-LAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEV----RGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSGK 227          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.498e-11
Identity = 52/204 (25.49%), Postives = 96/204 (47.06%), Query Frame = 2
Query:   29 AIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEET 640
            AI  L   LI +    I+   I +   N  P P    P+IG+L  + G+ P  +    LA++ G +  L LG  P+ ++S  E  ++   T+D    +R  +V  + +          PYG+ W++ R+    EL  S +L+   +++  E +  +K L    SE+A + + V +SK +  L  +I  ++  G+ F   ++ +T
Sbjct:    2 AISLLCLFLITFVSLTIVGCKIKRSIWNLPPSPPKL-PVIGNLHQV-GELPH-RSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKL----SESAVDQSPVDLSKTLFWLAASILFRVAFGQSFHESEFTDT 198          
BLAST of FC920570 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11
Identity = 45/165 (27.27%), Postives = 78/165 (47.27%), Query Frame = 2
Query:  119 PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 613
            P P G WP+IG LPLL     +   L  +A KYG I  L++G   +++ S  +  K    T D   + R       ++ Y       A YG  W+ +RK++   +L    LE   +VR +E+   +K ++ +  E      +VV+++++     N+  ++I  KR
Sbjct:   35 PGPRG-WPVIGALPLLGAMPHVS--LAKMAKKYGAIMYLKVGTCGMVVASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYGAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDMSREG----ERVVVAEMLTFAMANMIGQVILSKR 192          
The following BLAST results are available for this feature:
BLAST of FC920570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
C76C1_ARATH2.637e-1130.67Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C75A5_EUSGR2.637e-1126.34Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71C4_MAIZE4.498e-1129.09Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71BH_ARATH4.498e-1125.49Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C75A3_PETHY7.672e-1127.27Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]

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Properties
Property NameValue
Genbank descriptionC32010B02EF RVDevelop1 Citrus clementina cDNA clone C32010B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920570 ID=FC920570; Name=FC920570; organism=Citrus clementina; type=EST; length=669bp
GACCATGGATTCTACTTCTTTCTCCCCAGCAATTTTTGAGCTCTTATCTC
TGCTAATTGTCTATTTTTTTTGGAGAATCATAGCAAAATCTATAAACAAA
AGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGG
CCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAG
CATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCAT
CCCATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGATTGCTTCACTAC
CAATGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGCAGGCAAGTATA
TGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCAGTACTGG
CGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCT
TGAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACACTTTCATCAAAG
ATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTG
ATCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGCCTGAAACTGAT
AGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAAACAGGCAGCGAGG
CTTGGCGTATNCATAGAGC
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