FC920582

Overview
NameFC920582
Unique NameFC920582
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2507 contig Ccv1_Contig2507:1..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.649e-13
Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  378 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623
            A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+   +V++MIK  V  +G++D+L+N
Sbjct:    7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVN 88          
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.649e-13
Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  378 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623
            A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+   +V++MIK  V  +G++D+L+N
Sbjct:    7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVN 88          
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.649e-13
Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  378 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623
            A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+   +V++MIK  V  +G++D+L+N
Sbjct:    7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVN 88          
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.649e-13
Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  378 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623
            A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+   +V++MIK  V  +G++D+L+N
Sbjct:    7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVN 88          
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.649e-13
Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  378 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623
            A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+   +V++MIK  V  +G++D+L+N
Sbjct:    7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVN 88          
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.649e-13
Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  378 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623
            A+VTGASRGIGR++A  L + G  V VNYA S ++AE V +EI+A G  +     +V+   +V++MIK  V  +G++D+L+N
Sbjct:    7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVN 88          
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: DHG1_BACME (Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.071e-13
Identity = 33/89 (37.08%), Postives = 60/89 (67.42%), Query Frame = 3
Query:  357 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623
            +++E  V V+TG+S G+G+A+A        KV+VNY    +EA  V +EI+  GG+A+   GDV+ E+DV +++++++  +G +D++IN
Sbjct:    3 KDLEGKVVVITGSSTGLGKAMAIRFATEKAKVVVNYRSKEEEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSSIKEFGKLDVMIN 91          
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: THR1_GLOLA (Trihydroxynaphthalene reductase OS=Glomerella lagenarium GN=THR1 PE=3 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 7.929e-13
Identity = 38/81 (46.91%), Postives = 51/81 (62.96%), Query Frame = 3
Query:  375 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL 617
            VA+VTGA RGIGR +A  LG+ G KV+VNYA S++ AEEV + I+ SG  A +   +VS    +  M   A   WG +DI+
Sbjct:   31 VALVTGAGRGIGREMAMELGRRGAKVIVNYANSAETAEEVVQAIKKSGSDAASIKANVSDVDQIVKMFGEAKQIWGRLDIV 111          
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: STCU_EMENI (Versicolorin reductase OS=Emericella nidulans GN=stcU PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 7.929e-13
Identity = 37/85 (43.53%), Postives = 57/85 (67.06%), Query Frame = 3
Query:  363 VEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDIL 617
            ++  VA+VTGA RGIG A+A +LG+ G KV+VNYA S + AE+V  EI+++G  A++   DV     V  ++  AV+ +G +DI+
Sbjct:    9 LDGKVALVTGAGRGIGAAIAVALGQRGAKVVVNYANSREAAEKVVDEIKSNGSDAISIQADVGDPDAVTKLMDQAVEHFGYLDIV 93          
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: DHG_BACME (Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.036e-12
Identity = 33/89 (37.08%), Postives = 59/89 (66.29%), Query Frame = 3
Query:  357 QNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623
            +++E  V V+TG+S G+G+++A        KV+VNY     EA  V +EI+  GG+A+   GDV+ E+DV +++++A+  +G +D++IN
Sbjct:    3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMIN 91          
The following BLAST results are available for this feature:
BLAST of FC920582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
FABG_STAAW4.649e-1345.123-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS4.649e-1345.123-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR4.649e-1345.123-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN4.649e-1345.123-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM4.649e-1345.123-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC4.649e-1345.123-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
DHG1_BACME6.071e-1337.08Glucose 1-dehydrogenase 1 OS=Bacillus megaterium G... [more]
THR1_GLOLA7.929e-1346.91Trihydroxynaphthalene reductase OS=Glomerella lage... [more]
STCU_EMENI7.929e-1343.53Versicolorin reductase OS=Emericella nidulans GN=s... [more]
DHG_BACME1.036e-1237.08Glucose 1-dehydrogenase OS=Bacillus megaterium PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32010C08EF RVDevelop1 Citrus clementina cDNA clone C32010C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920582 ID=FC920582; Name=FC920582; organism=Citrus clementina; type=EST; length=654bp
TTTTTTTTTTTTTTTGGTTGGCTTGTATAAAAGGGAGCGAGCAAGGAAGC
GTCTCTCGAAGCCATTACCACAAAACTTCATTTCTGGCTACCCTCTTGTC
TTGGATTATTTCGTTTCGCGGAAAACCTCTCATGGCTGCCGTCGCCGGAT
CCAACATTGTCGCGTTCAAATCGGCGGCTACTTCCGCGAAATTCGGTGAC
CGAAAAATCCCGCAGTTTCGTCAATGGTCTCCTGTTCAGGTTAAGGCTCT
GCCTCGCCCTTCCGTTGAGCTCAAGAGTAGATGGAACAGCTCCTTCCCTT
CTTCTGGAATCAGAGCTCAGGTTGCCACCATAGAACAAGCAACCAATGAA
GCAGTACAAAATGTGGAAGCTCCTGTGGCTGTGGTGACTGGTGCCTCTAG
GGGTATTGGCAGAGCAGTAGCGACGTCCTTGGGAAAAGCAGGTTGCAAGG
TCCTGGTAAATTATGCTAGGTCATCAAAGGAAGCCGAAGAAGTTTGCAAA
GAGATTGAGGCATCTGGCGGTCAGGCTCTTACTTTTGGTGGAGATGTTTC
CAAAGAAGCTGATGTGGAATCAATGATCAAAACTGCTGTCGATGCTTGGG
GAACTGTTGATATATTGATTAACATGCANGAATCACTAGAGATACATTGC
TCAT
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