FC920593

Overview
NameFC920593
Unique NameFC920593
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920593 vs. ExPASy Swiss-Prot
Match: GDL9_ARATH (GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana GN=At1g28600 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.768e-24
Identity = 70/182 (38.46%), Postives = 97/182 (53.30%), Query Frame = 1
Query:   46 IFLMFVLLPSLFSALTAATNTLTPRPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHNKD-NATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTQLIWFNKFLESKGCKEAESSGPQCQAAFDDALFWVGEIGVNDYAY 588
            IFL   L  ++ S+ T   N      F  I +FGDS  DTGN    +  +     +  PYG T+FHHPT R  DGR+++DF+ + + LP++PPY  +K+ N   GVNFAV GATA+  +F  K  +    T  S+  QL  F K L +  C     S   C+    +AL  +GEIG NDY +
Sbjct:    9 IFLFSTLFVTIVSSETPCPN------FKSIISFGDSIADTGNLVGLSDRNQLPVTAFPPYGETFFHHPTGRSCDGRIIMDFIAEFVGLPYVPPYFGSKNRNFDKGVNFAVAGATALKSSFLKKRGIQ-PHTNVSLGVQLKSFKKSLPNL-C----GSPSDCRDMIGNALILMGEIGGNDYNF 178          
BLAST of FC920593 vs. ExPASy Swiss-Prot
Match: GDL16_ARATH (GDSL esterase/lipase At1g31550 OS=Arabidopsis thaliana GN=At1g31550 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23
Identity = 68/206 (33.01%), Postives = 108/206 (52.43%), Query Frame = 1
Query:   61 VLLPSLFSALTAATNTLTPRPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHNKD-NATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTQLIWFNKFLESKGCKEAESSGPQCQAAFDDALFWVGEIGVNDYAYTLGSSVTSDTIRKLAIPSFYNFLQALLKE 675
            + L +LF ++ ++ +    R F  I +FGDS  DTGN    +  +     +  PYG T+FHHPT R+SDGRL+IDF+ + L LP++PPY  + + N   GVNFAV  ATA+  +F  +          S+  QL  F + L +     ++     C+    +AL  +GEIG NDY +        D +++L +P   + + + + E
Sbjct:   15 LFLSTLFVSIVSSESQC--RNFESIISFGDSIADTGNLLGLSDHNNLPMSAFPPYGETFFHHPTGRFSDGRLIIDFIAEFLGLPYVPPYFGSTNGNFEKGVNFAVASATALESSFLEEKGYHCPHN-FSLGVQLKIFKQSLPNLCGLPSD-----CRDMIGNALILMGEIGANDYNFPFFQLRPLDEVKEL-VPLVISTISSAITE 211          
BLAST of FC920593 vs. ExPASy Swiss-Prot
Match: GDL10_ARATH (GDSL esterase/lipase At1g28610 OS=Arabidopsis thaliana GN=At1g28610 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.072e-21
Identity = 66/189 (34.92%), Postives = 99/189 (52.38%), Query Frame = 1
Query:   52 LMFVLLPSLFSALTAATNTLTPRPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHNKD-NATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTQLIWFNKFLESKGCKEAESSGPQCQAAFDDALFWVGEIGVNDYAYTLGSSVTSD 615
            L+   L +LF  +T  ++    R    I +FGDS TDTGN    +  +     +  PYG T+FHHPT R  +GR++IDF+ + L LP +PP+  +K+ N   GVNFAV GATA+  +   K  +    +  S+  QL  F + L +  C     S   C+    +A   +GEIG ND+ +    + TS+
Sbjct:    7 LVSFFLSTLF--VTIVSSQTQCRNLESIISFGDSITDTGNLVGLSDRNHLPVTAFLPYGETFFHHPTGRSCNGRIIIDFIAEFLGLPHVPPFYGSKNGNFEKGVNFAVAGATALETSILEKRGIYYPHSNISLGIQLKTFKESLPNL-C----GSPTDCRDMIGNAFIIMGEIGGNDFNFAFFVNKTSE 188          
BLAST of FC920593 vs. ExPASy Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16
Identity = 71/211 (33.65%), Postives = 99/211 (46.92%), Query Frame = 1
Query:   76 LFSALTAATNTLTPRP---FNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHN-KDNATYGVNFAVGGAT--AVNHAFFVKNNLSLDITPQSIQTQLIWFNKF------LESKGCKEAESSGPQCQAAFDDALFWVGEIGVNDYAYTLGSSVTSDTIRKLAIPSFYNFLQALLK 672
            L   L A T +++ +P   F  IY FGDS +DTG    A  P         PYG  +FH PT R SDGRL IDF+ + L LP+L  YL++   N  +G NFA GG+T    N   F        I+P S+  Q+  F++F      L ++     +      Q  F  AL+   +IG ND   ++G    S    K  IP   N L + ++
Sbjct:   20 LLLCLFAVTTSVSVQPTCTFPAIYNFGDSNSDTGGISAAFEPI------RDPYGQGFFHRPTGRDSDGRLTIDFIAERLGLPYLSAYLNSLGSNFRHGANFATGGSTIRRQNETIF-----QYGISPFSLDMQIAQFDQFKARSALLFTQIKSRYDREKLPRQEEFAKALY-TFDIGQND--LSVGFRTMSVDQLKATIPDIVNHLASAVR 216          
BLAST of FC920593 vs. ExPASy Swiss-Prot
Match: GDL53_ARATH (GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana GN=At3g26430 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16
Identity = 60/190 (31.58%), Postives = 97/190 (51.05%), Query Frame = 1
Query:  124 FNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHN-KDNATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTQLIWFNKFLESKGCKEAESSG-----PQCQAAFDDALFWVGEIGVNDYAYTLGSSVTSDTIRKLAIPSFYNFLQALLKE 675
            F  I+ FGDS +DTG    + G + +      P G T+FH P+ R+SDGRL+IDF+ + L LP+L  +L +   N ++G NFA  G+T       +  +    ++P S+  QL+ F+ F+                 P+ +  F  AL+   +IG ND    L  ++TSD I K  IP  ++ L  ++++
Sbjct:   29 FPAIFNFGDSNSDTGGLSASFGQAPY------PNGQTFFHSPSGRFSDGRLIIDFIAEELGLPYLNAFLDSIGSNFSHGANFATAGSTVRPPNATIAQS---GVSPISLDVQLVQFSDFITRSQLIRNRGGVFKKLLPK-KEYFSQALY-TFDIGQNDLTAGLKLNMTSDQI-KAYIPDVHDQLSNVIRK 206          
BLAST of FC920593 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.270e-14
Identity = 41/88 (46.59%), Postives = 53/88 (60.23%), Query Frame = 1
Query:  124 FNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHN-KDNATYGVNFAVGGAT 384
            F  I+ FGDS +DTG    A  P         PYG T+FH  T RYSDGRL+IDF+ +S +LP+L PYL +   N  +G +FA  G+T
Sbjct:   32 FPAIFNFGDSNSDTGGKAAAFYPLN------PPYGETFFHRSTGRYSDGRLIIDFIAESFNLPYLSPYLSSLGSNFKHGADFATAGST 113          
BLAST of FC920593 vs. ExPASy Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 39/92 (42.39%), Postives = 52/92 (56.52%), Query Frame = 1
Query:  133 IYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLH--NKDNATYGVNFAVGGATAVNHAF 402
            ++ FGDSF D GN       +     +  PYG T+F  PT R+SDGRL+ DF+ +  +LP +PP+L   N     YGVNFA  GA A+   F
Sbjct:   49 LFLFGDSFLDAGNNNYINTTT-LDQANFPPYGQTFFGLPTGRFSDGRLISDFIAEYANLPLIPPFLEPGNSQKKLYGVNFASAGAGALVETF 139          
BLAST of FC920593 vs. ExPASy Swiss-Prot
Match: FUCO3_ARATH (Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 51/138 (36.96%), Postives = 73/138 (52.90%), Query Frame = 1
Query:   73 SLFSALTAATNTLTPRPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYLHN-KDNATYGVNFAVGGA--TAVNHAFFVKNNLSLDITPQSIQTQLIWFNKF 477
            SL S+L+ +T+      F  I+ FGDS +DTG    A G +G       P+GS++F  P  RY DGRLVIDF+ +SL LP+L  +L +   N ++G NFA  G+   A+N             +P S+  Q + F  F
Sbjct:   12 SLLSSLSPSTHAHQCH-FPAIFNFGDSNSDTGGLSAAFGQAG------PPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPYLSAFLDSVGSNFSHGANFATAGSPIRALNSTL-----RQSGFSPFSLDVQFVQFYNF 137          
BLAST of FC920593 vs. ExPASy Swiss-Prot
Match: GLIP1_ARATH (GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13
Identity = 60/183 (32.79%), Postives = 86/183 (46.99%), Query Frame = 1
Query:   49 FLMFVLLPSLFSALTAATNTLTPRPFNKIYAFGDSFTDTGNTKTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPYL---HNKDNATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTQLIWFNKFLESKGCKEAESSGPQCQAAFDDALFWVGEIGVNDYAY 588
            FL + ++ S+ S      N L     + ++ FGDS  D GN       S     +  PYG T F  PT R SDGRL+ DF+ +   LP +PP L   +      YGVNFA GGA A+   F   + L +     +++TQL  F K  E    K  ++ G +  +       ++  IG+NDY Y
Sbjct:   11 FLAYTIIISIGSINCIDNNNLVTNQ-SALFVFGDSVFDAGNNNYIDTLSSV-RSNYWPYGQTTFKSPTGRVSDGRLIPDFIAEYAWLPLIPPNLQPFNGNSQFAYGVNFASGGAGALVGTF---SGLVI-----NLRTQLNNFKKVEEMLRSKLGDAEGKRVIS----RAVYLFHIGLNDYQY 179          
BLAST of FC920593 vs. ExPASy Swiss-Prot
Match: GLIP6_ARATH (GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=GLIP6 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.404e-13
Identity = 52/159 (32.70%), Postives = 79/159 (49.69%), Query Frame = 1
Query:   37 SSQIFLMFVLLPSLFSALTAATNTLTPRPFNKIYAFGDSFTDTGNT---KTATGPSGFGHVSTSPYGSTYFHHPTNRYSDGRLVIDFVTQSLSLPFLPPY-------LHNKDNATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTQLIWFNKFLE 483
            SS + L+  LL  +   + A +++  P     I+ FGDS  D GN    K  T  + F      PYGS++FH PT R+++GR V DF+++ + LP   P+       L+   N + G+NFA  G+        +  N  + +TP  IQTQL  F   +E
Sbjct:    4 SSSMDLLMCLLLLISPVVLAKSSSTVPA----IFTFGDSIFDAGNNHYNKNCTAQADF-----PPYGSSFFHRPTGRFTNGRTVADFISEFVGLPLQKPFLELQIQILNGTSNFSNGINFASAGS-----GLLLDTNKFMGVTP--IQTQLQQFQTLVE 146          
The following BLAST results are available for this feature:
BLAST of FC920593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
GDL9_ARATH1.768e-2438.46GDSL esterase/lipase At1g28600 OS=Arabidopsis thal... [more]
GDL16_ARATH4.354e-2333.01GDSL esterase/lipase At1g31550 OS=Arabidopsis thal... [more]
GDL10_ARATH1.072e-2134.92GDSL esterase/lipase At1g28610 OS=Arabidopsis thal... [more]
GDL76_ARATH1.039e-1633.65GDSL esterase/lipase At5g14450 OS=Arabidopsis thal... [more]
GDL53_ARATH5.155e-1631.58GDSL esterase/lipase At3g26430 OS=Arabidopsis thal... [more]
EST_HEVBR1.270e-1446.59Esterase OS=Hevea brasiliensis PE=1 SV=1[more]
GLIP5_ARATH4.825e-1442.39GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=... [more]
FUCO3_ARATH6.302e-1436.96Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FX... [more]
GLIP1_ARATH1.075e-1332.79GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=... [more]
GLIP6_ARATH1.404e-1332.70GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32010D12EF RVDevelop1 Citrus clementina cDNA clone C32010D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920593 ID=FC920593; Name=FC920593; organism=Citrus clementina; type=EST; length=702bp
CTTAGTGAGACAATGGCTCATTCCTTCGGAGTTTTTTCCTCCCAAATTTT
CCTCATGTTCGTACTCTTACCCTCCCTGTTTTCTGCCCTTACCGCTGCAA
CCAACACATTAACCCCACGTCCATTTAATAAGATCTATGCCTTCGGTGAC
TCATTCACCGACACTGGTAACACCAAGACTGCGACTGGCCCTAGTGGCTT
TGGCCATGTCTCCACCTCTCCATACGGCAGCACATATTTCCACCACCCCA
CCAACCGATACTCCGATGGACGGCTGGTGATTGACTTTGTAACTCAATCC
CTGTCACTACCATTCTTGCCACCTTACCTTCACAACAAAGATAATGCAAC
ATATGGTGTCAACTTTGCTGTTGGCGGTGCCACTGCTGTAAATCATGCTT
TCTTTGTCAAAAACAATCTCAGTCTTGACATTACTCCTCAGTCAATCCAA
ACTCAGCTCATTTGGTTCAACAAGTTCTTGGAGAGCAAGGGATGTAAAGA
AGCAGAGTCCTCAGGGCCTCAGTGCCAGGCAGCTTTCGATGATGCATTGT
TCTGGGTTGGTGAAATTGGAGTCAACGATTATGCGTACACTCTAGGATCT
TCTGTTACAAGTGACACTATCCGAAAACTCGCTATCCCTAGTTTTTACAA
TTTTCTGCAGGCGTTGCTTAAAGAGGAGCAAATATGTTGTTGTTCAGGTC
TG
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