FC920596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920596 vs. ExPASy Swiss-Prot
Match: ACSL3_RAT (Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norvegicus GN=Acsl3 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.259e-29 Identity = 74/203 (36.45%), Postives = 105/203 (51.72%), Query Frame = 1 Query: 79 EEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWQGDV---------RYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESC-SGCFTSLADVFNMIGTVGVPMTTVESRLESVPEMGY 657 EED Y +LPLAH+ + E C+ GC IG+ + D LKPT+ + VP + DRIY + NK++ A + LF AYNYK+ + KG + PL D VF +R GG ++ +L G APL + F+ + P+ QGYGLTES +G T + D +N G VG P+ E +L++ E GY Sbjct: 320 EEDVYIGYLPLAHVLELSAELVCLSHGCRIGYSSPQTLADQSSKIKKGSKGDTSVLKPTLMAAVPEIMDRIYKNVMNKVNEMSAFQRNLFILAYNYKMEQISKGC----STPLCDRFVFRNVRRLLGGNIRVLLCGGAPLSATTQRFMNICFCCPVGQGYGLTESTGAGTITEVWD-YN-TGRVGAPLVCCEIKLKNWEEGGY 516
BLAST of FC920596 vs. ExPASy Swiss-Prot
Match: ACSL4_RAT (Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norvegicus GN=Acsl4 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29 Identity = 75/202 (37.13%), Postives = 106/202 (52.48%), Query Frame = 1 Query: 82 EDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWQ----GDVRYLME-----DIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESC-SGCFTSLADVFNMIGTVGVPMTTVESRLESVPEMGY 657 +DTY +LPLAH+ + E C GC IG+ D ++ D LKPT+ + VP + DRIY + +K+ + K LF+ Y+YKL +KKG APL + ++F K++ GG ++ MLSG APL F+ V P+ QGYGLTESC +G T + D G VG P+ E +L+ E GY Sbjct: 271 KDTYIGYLPLAHVLELTAEISCFTYGCRIGYSSPLTLSDQSSKIKKGSKGDCTVLKPTLMAAVPEIMDRIYKNVMSKVQEMNYIQKTLFKIGYDYKLEQIKKGYD----APLCNLILFKKVKALLGGNVRMMLSGGAPLSPQTHRFMNVCFCCPIGQGYGLTESCGAGTVTEVTDY--TTGRVGAPLICCEIKLKDWQEGGY 466
BLAST of FC920596 vs. ExPASy Swiss-Prot
Match: ACSL3_MOUSE (Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus GN=Acsl3 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29 Identity = 74/203 (36.45%), Postives = 105/203 (51.72%), Query Frame = 1 Query: 79 EEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWQGDV---------RYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESC-SGCFTSLADVFNMIGTVGVPMTTVESRLESVPEMGY 657 EED Y +LPLAH+ + E C+ GC IG+ + D LKPT+ + VP + DRIY + NK++ A + LF AYNYK+ + KG + PL D VF +R GG ++ +L G APL + F+ + P+ QGYGLTES +G T + D +N G VG P+ E +L++ E GY Sbjct: 320 EEDVYIGYLPLAHVLELSAELVCLSHGCRIGYSSPQTLADQSSKIKKGSKGDTSVLKPTLMAAVPEIMDRIYKNVMNKVNEMSAFQRNLFILAYNYKMEQISKGC----STPLCDRFVFRNVRRLLGGNIRLLLCGGAPLSATTQRFMNICFCCPVGQGYGLTESTGAGTITEVWD-YN-TGRVGAPLVCCEIKLKNWEEGGY 516
BLAST of FC920596 vs. ExPASy Swiss-Prot
Match: ACSL4_MOUSE (Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus GN=Acsl4 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.247e-29 Identity = 74/202 (36.63%), Postives = 106/202 (52.48%), Query Frame = 1 Query: 82 EDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWQ----GDVRYLME-----DIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESC-SGCFTSLADVFNMIGTVGVPMTTVESRLESVPEMGY 657 +DTY +LPLAH+ + E C GC IG+ D ++ D LKPT+ + VP + DRIY + +K+ + K LF+ Y+YKL +KKG APL + ++F K+++ GG ++ ML G APL F+ V P+ QGYGLTESC +G T + D G VG P+ E +L+ E GY Sbjct: 312 KDTYIGYLPLAHVLELTAEISCFTYGCRIGYSSPLTLSDQSSKIKKGSKGDCTVLKPTLMAAVPEIMDRIYKNVMSKVQEMNYVQKTLFKIGYDYKLEQIKKGYD----APLCNLILFKKVKDLVGGNVRMMLYGGAPLSPQTHRFMNVCLCCPIGQGYGLTESCGAGTVTEVTDY--TTGRVGAPLICCEIKLKDWQEGGY 507
BLAST of FC920596 vs. ExPASy Swiss-Prot
Match: ACSL5_RAT (Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.374e-28 Identity = 79/224 (35.27%), Postives = 127/224 (56.70%), Query Frame = 1 Query: 1 VLTNQAIVAEVLS----VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWQGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGC-FTSLADVFNMIGTVGVPMTTVESRLESVPEMGY 657 +LT+Q IV+ + + ++ +F T ED S+LPLAH+++++++ G IGF+QGD+R L +D++ LKPT+F VPR+ +R+Y + N+ + L K L A K ++ G+ + + L D LVFSKI+ + GG+++ M++GAAP+ V F R G + + YG TE +GC TS D G VG P++ +LE V +M Y Sbjct: 272 MLTHQNIVSNMAAFLKFLEPIFQPT-----PEDVTISYLPLAHMFERLVQGVIFSCGGKIGFFQGDIRLLPDDMKALKPTVFPTVPRLLNRVYDKVQNEAKT--PLKKFLLNLAIISKFNEVRNGIIRRNS--LWDKLVFSKIQSSLGGKVRLMITGAAPISTPVLTFFRAAMGCWVFEAYGQTECTAGCSITSPGDW--TAGHVGTPVSCNFVKLEDVADMNY 484
BLAST of FC920596 vs. ExPASy Swiss-Prot
Match: ACSL5_MOUSE (Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculus GN=Acsl5 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.178e-27 Identity = 72/195 (36.92%), Postives = 111/195 (56.92%), Query Frame = 1 Query: 76 SEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWQGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGC-FTSLADVFNMIGTVGVPMTTVESRLESVPEMGY 657 + +D S+LPLAH+++++++ G IGF+QGD+R L +D++ LKPT+F VPR+ +R+Y + N+ + L K L A K +K G+ + + L D LVFSKI+ + GG+++ M++GAAP+ V F R G + + YG TE GC TS D G VG P+ +LE V +M Y Sbjct: 296 TSDDVTISYLPLAHMFERLVQGILFSCGGKIGFFQGDIRLLPDDMKALKPTVFPTVPRLLNRVYDKVQNEAKT--PLKKFLLNLAIISKFNEVKNGIIRRDS--LWDKLVFSKIQGSLGGKVRLMITGAAPISTPVLTFFRAAMGCWVFEAYGQTECTGGCSITSPGDW--TAGHVGTPVACNFVKLEDVADMNY 484
BLAST of FC920596 vs. ExPASy Swiss-Prot
Match: ACSL6_MOUSE (Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculus GN=Acsl6 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.539e-27 Identity = 77/222 (34.68%), Postives = 128/222 (57.66%), Query Frame = 1 Query: 1 VLTNQAIVAEVLSVDQMFVVTGKVC--SEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWQGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGC-FTSLADVFNMIGTVGVPMTTVESRLESVPEMGY 657 +LT+ +VA+ VT KV ++D SFLPLAH+++++I++ G +GF+QGD+R L +D++ L+PT+F VPR+ +R+Y I ++ + +L + L EFA K ++ G+ +N + + D L F+KI+ + GG ++ +++GAAP V FLR G + +GYG TE +GC FT+ D + G VG P+ +L E+ Y Sbjct: 287 MLTHGNVVADFSG---FLKVTEKVIFPRQDDVLISFLPLAHMFERVIQSVVYCHGGRVGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFHQADT--SLKRWLLEFAAKRKQAEVRSGIIRNNS--IWDELFFNKIQASLGGHVRMIVTGAAPASPTVLGFLRAALGCQVYEGYGQTECTAGCTFTTPGDWTS--GHVGAPLPCNHIKLVDAEELNY 499
BLAST of FC920596 vs. ExPASy Swiss-Prot
Match: ACSL6_RAT (Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norvegicus GN=Acsl6 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.428e-27 Identity = 68/192 (35.42%), Postives = 116/192 (60.42%), Query Frame = 1 Query: 85 DTYFSFLPLAHIYDQIIETHCIHKGCSIGFWQGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGC-FTSLADVFNMIGTVGVPMTTVESRLESVPEMGY 657 D +FS+LPLAH++++++++ G +GF+QGD+R L +D++ L+PT+F VPR+ +R+Y I ++ + +L + L EFA K ++ G+ +N + + D L F+KI+ + GG ++ +++GAAP V FLR G + +GYG TE +GC FT+ D + G VG P+ +L E+ Y Sbjct: 314 DVHFSYLPLAHMFERMVQSVVYCHGGRVGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFHQADT--SLKRWLLEFAAKRKQAEVRSGIIRNNS--IWDELFFNKIQASLGGHVRMIVTGAAPASPTVLGFLRAALGCQVYEGYGQTECTAGCTFTTPGDWTS--GHVGAPLPCNHIKLVDAEELNY 499
BLAST of FC920596 vs. ExPASy Swiss-Prot
Match: ACSL6_HUMAN (Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens GN=ACSL6 PE=2 SV=4) HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27 Identity = 78/222 (35.14%), Postives = 128/222 (57.66%), Query Frame = 1 Query: 1 VLTNQAIVAEVLSVDQMFVVTGKVC--SEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWQGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGC-FTSLADVFNMIGTVGVPMTTVESRLESVPEMGY 657 +LT+ +VA+ VT KV ++D SFLPLAH+++++I++ G +GF+QGD+R L +D++ L PT+F VPR+ +R+Y I ++ ++ L + L EFA K ++ G+ +N + + D L F+KI+ + GG ++ +++GAAP V FLR G + +GYG TE +GC FT+ D + G VG P+ +L V E+ Y Sbjct: 287 MLTHGNVVADFSG---FLKVTEKVIFPRQDDVLISFLPLAHMFERVIQSVVYCHGGRVGFFQGDIRLLSDDMKALCPTIFPVVPRLLNRMYDKIFSQANT--PLKRWLLEFAAKRKQAEVRSGIIRNDS--IWDELFFNKIQASLGGCVRMIVTGAAPASPTVLGFLRAALGCQVYEGYGQTECTAGCTFTTPGDWTS--GHVGAPLPCNHIKLVDVEELNY 499
BLAST of FC920596 vs. ExPASy Swiss-Prot
Match: LCF2_SCHPO (Long-chain-fatty-acid--CoA ligase 2 OS=Schizosaccharomyces pombe GN=SPBP4H10.11c PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.790e-26 Identity = 73/226 (32.30%), Postives = 129/226 (57.08%), Query Frame = 1 Query: 1 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGF------WQGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNM-IGTVGVPMTTVESRLESVPEMGY 657 VL ++ I+A + +++ + + + +D ++LPLAHI++ I E C++ G +G+ V D+ E +PT+ GVP VY+ I GI K+SS A +K+F + + K +++ +P + A LD++VF+K++ A GGRL+ +SG A L + FL + P+ GYGLTE+C+G F + +++ TVG P+ ++E +L +P++GY Sbjct: 264 VLLHRNIIAALGGINR---ILSQHINVKDYVLAYLPLAHIFEFIFEMCCLYWGGVLGYASPRTLTDASVVNCKGDLTEFRPTVLIGVPAVYELIKKGILAKVSSMPAHRQKVFSGSLSLKQYLIERNLPGSAA---LDAIVFNKVKAATGGRLRYCISGGAALAASTQAFLS-SCICPVLPGYGLTETCAGSFVLSPEQWHLYANTVGFPIPSIEFKLVDIPDLGY 482 The following BLAST results are available for this feature:
BLAST of FC920596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920596 ID=FC920596; Name=FC920596; organism=Citrus clementina; type=EST; length=668bpback to top |