FC920598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.515e-24 Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 103 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 D + ++ D V+ RLL+ +I+ L+ E++ EL+ + P L+ +V L++ P+ V++++S+ + + V +D +KPG V +N+ IL+ LP + D VK ME+ EKP Y++IGGLE+QI+EL E + LP+ E F+++GV PPKGVLLYGPPGTGKT Sbjct: 6 DTIRDASSSDEVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLS--------PPLIEAVV--LDVLPDGR------------------VLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKT 182
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.515e-24 Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 103 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 D + ++ D V+ RLL+ +I+ L+ E++ EL+ + P L+ +V L++ P+ V++++S+ + + V +D +KPG V +N+ IL+ LP + D VK ME+ EKP Y++IGGLE+QI+EL E + LP+ E F+++GV PPKGVLLYGPPGTGKT Sbjct: 6 DTIRDASSSDEVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLS--------PPLIEAVV--LDVLPDGR------------------VLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKT 182
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.515e-24 Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 103 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 D + ++ D V+ RLL+ +I+ L+ E++ EL+ + P L+ +V L++ P+ V++++S+ + + V +D +KPG V +N+ IL+ LP + D VK ME+ EKP Y++IGGLE+QI+EL E + LP+ E F+++GV PPKGVLLYGPPGTGKT Sbjct: 6 DTIRDASSSDEVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLS--------PPLIEAVV--LDVLPDGR------------------VLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKT 182
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.515e-24 Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 103 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 D + ++ D V+ RLL+ +I+ L+ E++ EL+ + P L+ +V L++ P+ V++++S+ + + V +D +KPG V +N+ IL+ LP + D VK ME+ EKP Y++IGGLE+QI+EL E + LP+ E F+++GV PPKGVLLYGPPGTGKT Sbjct: 6 DTIRDASSSDEVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLS--------PPLIEAVV--LDVLPDGR------------------VLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKT 182
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.584e-24 Identity = 56/127 (44.09%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 337 GANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 G +D ++RK V+K+ST + + V+PD + PG V +N+ + +++ LP E D R AME++EKP + DIGGL QI+++ E + LP+ + E F+K+G+ PPKGVLLYGPPGTGKT Sbjct: 73 GTVLDRVNERKA---VVKSSTGPNFLVNLSQFVEPDDIVPGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.584e-24 Identity = 56/159 (35.22%), Postives = 94/159 (59.12%), Query Frame = 1 Query: 268 LPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQHN 744 +P L+G ++E+++ N ++++++ T+ + ++ +D + LKP V + + S ++DTLP E DS + + DEKP+E Y+DIGG + Q QE+ EA+ LP+TH ++++G+ PP+GVLLYGPPGTGKT V H+ Sbjct: 70 VPLLIGQLLEMVDSNTG---------------------IVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHH 207
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.375e-24 Identity = 68/205 (33.17%), Postives = 111/205 (54.15%), Query Frame = 1 Query: 103 DQLSSMTADDIVRASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 D + ++ D V+ RLL+ +I+ L+ E++ EL+ + P L+ +V L++ P+ V++++S+ + + + +D +KPG V +N+ IL+ LP + D VK ME+ E+P Y++IGGLE+QI+EL E + LP+ + E F+++GV PPKGVLLYGPPGTGKT Sbjct: 6 DTIRDASSPDEVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLS--------PPLIEAVV--LDVLPDGR------------------VLVRSSSGPNLVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKT 182
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.408e-24 Identity = 66/193 (34.20%), Postives = 98/193 (50.78%), Query Frame = 1 Query: 139 RASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 R R L+ ++R L+ + +R EL P G ++E+L+ +D A +++ + + ++ DKLKPG V +++ + I++ LP+E D V EV EKP Y DIGGLE+Q+ EL EA+ LP+ H E F+K+G+ PPKGVLLYGPPG GKT Sbjct: 22 RRIRQLELQVRTLEADKERLERELSRLRTEMSRLRQP-------PAFAGTVIEVLD---DDRA------------------IVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKT 186
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.408e-24 Identity = 71/219 (32.42%), Postives = 108/219 (49.32%), Query Frame = 1 Query: 97 EDDQLSSMTADDIV----RASRLLDNEIRVLKEELQRTNLELDSFXXXXXXXXXXXXXXXXLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT*WLVLVQH 741 ED+ DD V R R L+ ++R+L+ + +R EL P G+++E+L+ +D A +++ + + +D KL+PG V +++ + I++ LP+ D V EV E+P YNDIGGL+KQ+QEL EAI LP+ H E F+++G+ PPKGVLLYGPPG GKT + H Sbjct: 3 EDEAQFHGNYDDYVTYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQP-------PAFAGSVIEVLD---DDRA------------------IVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAH 193
BLAST of FC920598 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.408e-24 Identity = 51/112 (45.54%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 382 VLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKT 717 ++ ++T ++ V+ ++D + LKPG V ++K S ++D LP E DS ++ + DEKP Y DIGGL+ Q QE+ EA+ LP+TH E +Q++G+ PP+GVL+YGPPG GKT Sbjct: 98 IVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKT 209 The following BLAST results are available for this feature:
BLAST of FC920598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920598 ID=FC920598; Name=FC920598; organism=Citrus clementina; type=EST; length=750bpback to top |